MGE detailed information
MGE type: Prophage MGE length: 20714 bp
Accession: NZ_CP008929 Location: 1391330..1412043 Organism: Klebsiella pneumoniae strain PMK1 Replicon: chromosome
Accession: NZ_CP008929 Location: 1391330..1412043 Organism: Klebsiella pneumoniae strain PMK1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PMK1_RS06795 () | 1386356..1387393 | - | 1038 | WP_004181468.1 | oxidoreductase | - |
| PMK1_RS06800 () | 1387658..1388311 | + | 654 | WP_004181469.1 | polymer-forming cytoskeletal protein | - |
| PMK1_RS06805 () | 1388539..1389027 | + | 489 | WP_004181470.1 | N-acetyltransferase | - |
| PMK1_RS06810 () | 1389117..1390862 | - | 1746 | WP_004181471.1 | gamma-glutamyltransferase | - |
| PMK1_RS06815 () | 1390986..1391306 | + | 321 | WP_004150073.1 | DUF2756 family protein | - |
| PMK1_RS06820 () | 1391330..1392070 | - | 741 | WP_004181472.1 | glycerophosphodiester phosphodiesterase | - |
| PMK1_RS06825 () | 1392067..1393137 | - | 1071 | WP_004150074.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| PMK1_RS06830 () | 1393139..1393984 | - | 846 | WP_004181473.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| PMK1_RS06835 () | 1393981..1394868 | - | 888 | WP_002920792.1 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| PMK1_RS06840 () | 1394975..1396291 | - | 1317 | WP_004174008.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| PMK1_RS06845 () | 1396564..1396932 | - | 369 | WP_002920800.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| PMK1_RS06850 () | 1396929..1397150 | - | 222 | WP_004174006.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| PMK1_RS06855 () | 1397314..1398027 | - | 714 | WP_004145133.1 | High-affinity branched-chain amino acid transport ATP-binding protein LivF | VF |
| PMK1_RS06860 () | 1398029..1398796 | - | 768 | WP_002920803.1 | Lipopolysaccharide export system ATP-binding protein LptB | VF |
| PMK1_RS06865 () | 1398793..1400070 | - | 1278 | WP_004174005.1 | branched chain amino acid ABC transporter permease LivM | - |
| PMK1_RS06870 () | 1400067..1400993 | - | 927 | WP_002920807.1 | high-affinity branched-chain amino acid ABC transporter permease LivH | - |
| PMK1_RS06875 () | 1401055..1402164 | - | 1110 | WP_002920808.1 | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | - |
| PMK1_RS06890 () | 1402588..1402971 | + | 384 | WP_020325124.1 | aspartate 1-decarboxylase autocleavage activator PanM | - |
| PMK1_RS06895 () | 1403490..1404593 | - | 1104 | WP_002920812.1 | branched chain amino acid ABC transporter substrate-binding protein LivJ | - |
| PMK1_RS06900 () | 1404851..1406095 | - | 1245 | WP_004150081.1 | amino acid permease | - |
| PMK1_RS06905 () | 1406243..1407508 | - | 1266 | WP_020324414.1 | 4-aminobutyrate aminotransferase PuuE | VF |
| PMK1_RS06910 () | 1407627..1409150 | + | 1524 | WP_020324416.1 | PLP-dependent aminotransferase family protein | - |
| PMK1_RS06915 () | 1409203..1410057 | - | 855 | WP_002920815.1 | RNA polymerase sigma factor RpoH | - |
| PMK1_RS06920 () | 1410327..1411382 | - | 1056 | WP_004173994.1 | permease-like cell division protein FtsX | - |
| PMK1_RS06925 () | 1411375..1412043 | - | 669 | WP_002920817.1 | Cell division ATP-binding protein FtsE | VF |
| PMK1_RS06930 () | 1412046..1413569 | - | 1524 | WP_004181477.1 | signal recognition particle-docking protein FtsY | - |
| PMK1_RS06935 () | 1413752..1414348 | + | 597 | WP_002920820.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase | - |
| PMK1_RS06940 () | 1414338..1414613 | + | 276 | WP_002920822.1 | DUF1145 family protein | - |
| PMK1_RS06945 () | 1414627..1414977 | - | 351 | WP_004173989.1 | DUF2500 domain-containing protein | - |
| PMK1_RS06950 () | 1415128..1415754 | + | 627 | WP_004181478.1 | lysoplasmalogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Klebsiella pneumoniae subsp. pneumoniae HS11286 | Prophage | TA26031 | NC_016845 | 4967722..4988310 | 0.006 |