MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 85310 bp
Accession: NZ_CP008865 Location: 5573693..5659002 Organism: Pseudomonas aeruginosa strain S86968 Replicon: chromosome
Accession: NZ_CP008865 Location: 5573693..5659002 Organism: Pseudomonas aeruginosa strain S86968 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HW02_RS26620 () | 5569265..5573464 | + | 4200 | WP_016852119.1 | two-partner secretion system exoprotein TpsA4 | - |
| HW02_RS26625 () | 5573834..5574700 | + | 867 | WP_003111785.1 | ParA family protein | - |
| HW02_RS26630 () | 5574702..5575439 | + | 738 | WP_023102735.1 | hypothetical protein | - |
| HW02_RS26635 () | 5575436..5575933 | + | 498 | WP_003111783.1 | hypothetical protein | - |
| HW02_RS26640 () | 5575939..5576685 | + | 747 | WP_033873204.1 | hypothetical protein | - |
| HW02_RS26645 () | 5576682..5577368 | + | 687 | WP_003159719.1 | Lar family restriction alleviation protein | - |
| HW02_RS26650 () | 5577368..5578069 | + | 702 | WP_003103849.1 | DUF2786 domain-containing protein | - |
| HW02_RS26655 () | 5578066..5578773 | + | 708 | WP_034030493.1 | HNH endonuclease | - |
| HW02_RS26660 () | 5578757..5578975 | + | 219 | WP_003103847.1 | hypothetical protein | - |
| HW02_RS26665 () | 5578972..5580315 | + | 1344 | WP_003103846.1 | replicative DNA helicase | - |
| HW02_RS33720 () | 5580754..5581200 | - | 447 | WP_016561619.1 | hypothetical protein | - |
| HW02_RS26675 () | 5581378..5581563 | + | 186 | WP_003103845.1 | hypothetical protein | - |
| HW02_RS26680 () | 5581553..5582080 | + | 528 | WP_003141385.1 | hypothetical protein | - |
| HW02_RS26685 () | 5582077..5582334 | + | 258 | WP_019486081.1 | hypothetical protein | - |
| HW02_RS33385 () | 5582327..5582824 | + | 498 | WP_123796553.1 | hypothetical protein | - |
| HW02_RS26695 () | 5582817..5583050 | + | 234 | WP_019486083.1 | hypothetical protein | - |
| HW02_RS26700 () | 5583050..5584072 | + | 1023 | WP_023124916.1 | nucleoid-associated protein YejK | - |
| HW02_RS26705 () | 5584069..5584959 | + | 891 | WP_003117034.1 | DNA adenine methylase | - |
| HW02_RS26710 () | 5584980..5585249 | + | 270 | WP_003117035.1 | Arc family DNA-binding protein | - |
| HW02_RS26715 () | 5585246..5586979 | + | 1734 | WP_003448780.1 | ParB family protein | - |
| HW02_RS26720 () | 5587007..5587762 | + | 756 | WP_003121580.1 | DUF2857 domain-containing protein | - |
| HW02_RS26725 () | 5587765..5589090 | + | 1326 | WP_031675614.1 | hypothetical protein | - |
| HW02_RS26735 () | 5590542..5591120 | + | 579 | WP_071537152.1 | hypothetical protein | - |
| HW02_RS26745 () | 5591386..5592114 | + | 729 | WP_003448749.1 | TIGR03761 family integrating conjugative element protein | - |
| HW02_RS26750 () | 5592120..5592668 | + | 549 | WP_003120974.1 | DUF3158 family protein | - |
| HW02_RS26755 () | 5592716..5593546 | + | 831 | WP_012076855.1 | phage regulatory protein | - |
| HW02_RS26760 () | 5593576..5594034 | + | 459 | WP_016851607.1 | single-stranded DNA-binding protein | - |
| HW02_RS26765 () | 5594140..5594334 | + | 195 | WP_016851608.1 | hypothetical protein | - |
| HW02_RS26770 () | 5594579..5594746 | + | 168 | WP_170323396.1 | CrpP family protein | - |
| HW02_RS26775 () | 5594862..5596781 | + | 1920 | WP_023101571.1 | type I DNA topoisomerase | - |
| HW02_RS26780 () | 5597088..5597297 | + | 210 | WP_003105733.1 | cold-shock protein | - |
| HW02_RS26785 () | 5597519..5599408 | + | 1890 | WP_016851610.1 | hypothetical protein | - |
| HW02_RS26790 () | 5599405..5601381 | + | 1977 | WP_016851611.1 | DEAD/DEAH box helicase | - |
| HW02_RS26795 () | 5601522..5601866 | + | 345 | WP_016851612.1 | hypothetical protein | - |
| HW02_RS26800 () | 5601937..5602227 | - | 291 | WP_003448662.1 | putative addiction module antidote protein | Antitoxin Detail |
| HW02_RS26805 () | 5602224..5602523 | - | 300 | WP_003120987.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HW02_RS26810 () | 5602725..5603849 | + | 1125 | WP_012076859.1 | hypothetical protein | VF |
| HW02_RS26815 () | 5603849..5605558 | + | 1710 | WP_012076860.1 | hypothetical protein | VF |
| HW02_RS26820 () | 5605562..5606887 | + | 1326 | WP_003099758.1 | type 4b pilus protein PilO2 | - |
| HW02_RS26825 () | 5606877..5607410 | + | 534 | WP_003099760.1 | type IV pilus biogenesis protein PilP | - |
| HW02_RS26830 () | 5607419..5608999 | + | 1581 | WP_003099761.1 | hypothetical protein | VF |
| HW02_RS26835 () | 5608999..5610078 | + | 1080 | WP_003099764.1 | hypothetical protein | VF |
| HW02_RS26840 () | 5610100..5610630 | + | 531 | WP_003099765.1 | hypothetical protein | VF |
| HW02_RS26845 () | 5610627..5611583 | + | 957 | WP_016851614.1 | hypothetical protein | VF |
| HW02_RS26850 () | 5611576..5612955 | + | 1380 | WP_003099769.1 | hypothetical protein | VF |
| HW02_RS26855 () | 5612973..5613410 | + | 438 | WP_003120998.1 | hypothetical protein | VF |
| HW02_RS26865 () | 5614332..5614898 | + | 567 | WP_003120999.1 | hypothetical protein | - |
| HW02_RS26870 () | 5614975..5615154 | + | 180 | WP_004347955.1 | hypothetical protein | - |
| HW02_RS26875 () | 5615613..5616101 | + | 489 | WP_003448595.1 | DUF3577 domain-containing protein | - |
| HW02_RS33725 () | 5616239..5616397 | + | 159 | WP_003121002.1 | hypothetical protein | - |
| HW02_RS26880 () | 5616471..5616668 | + | 198 | WP_003448593.1 | hypothetical protein | - |
| HW02_RS26885 () | 5616860..5617573 | + | 714 | WP_003121003.1 | hypothetical protein | - |
| HW02_RS26890 () | 5617809..5618159 | + | 351 | WP_003099791.1 | hypothetical protein | - |
| HW02_RS26895 () | 5618216..5618848 | + | 633 | WP_003099792.1 | DUF3275 family protein | - |
| HW02_RS26900 () | 5618845..5619120 | + | 276 | WP_003099794.1 | hypothetical protein | - |
| HW02_RS26905 () | 5619190..5619552 | + | 363 | WP_003099795.1 | hypothetical protein | - |
| HW02_RS26910 () | 5619620..5619880 | + | 261 | WP_003099797.1 | hypothetical protein | - |
| HW02_RS26915 () | 5619973..5620578 | + | 606 | WP_003099799.1 | hypothetical protein | - |
| HW02_RS26920 () | 5620608..5622053 | + | 1446 | WP_003099801.1 | class I SAM-dependent methyltransferase | - |
| HW02_RS26925 () | 5622158..5624407 | + | 2250 | WP_059319173.1 | DEAD/DEAH box helicase | - |
| HW02_RS26930 () | 5624728..5624982 | - | 255 | WP_003099808.1 | hypothetical protein | - |
| HW02_RS26945 () | 5625623..5625820 | - | 198 | WP_003099811.1 | hypothetical protein | - |
| HW02_RS26950 () | 5626038..5626730 | + | 693 | WP_003123350.1 | hypothetical protein | - |
| HW02_RS26955 () | 5626741..5627496 | + | 756 | WP_003125319.1 | TIGR03759 family integrating conjugative element protein | - |
| HW02_RS26960 () | 5627481..5628062 | + | 582 | WP_003123352.1 | hypothetical protein | VF |
| HW02_RS26965 () | 5628059..5628559 | + | 501 | WP_012076862.1 | integrating conjugative element protein | - |
| HW02_RS26970 () | 5628568..5628837 | + | 270 | WP_012076863.1 | hypothetical protein | - |
| HW02_RS26975 () | 5628841..5631072 | + | 2232 | WP_012076864.1 | type IV conjugative transfer system coupling protein TraD | - |
| HW02_RS26980 () | 5631072..5631818 | + | 747 | WP_023083223.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| HW02_RS26985 () | 5631836..5632327 | + | 492 | WP_031806309.1 | hypothetical protein | - |
| HW02_RS26990 () | 5632568..5634049 | + | 1482 | WP_031806308.1 | UvrD-helicase domain-containing protein | - |
| HW02_RS26995 () | 5634158..5634463 | + | 306 | WP_009316299.1 | hypothetical protein | - |
| HW02_RS27000 () | 5634557..5634895 | + | 339 | WP_020750393.1 | RAQPRD family integrative conjugative element protein | - |
| HW02_RS27005 () | 5634892..5635131 | + | 240 | WP_003099839.1 | TIGR03758 family integrating conjugative element protein | - |
| HW02_RS27010 () | 5635149..5635505 | + | 357 | WP_009316297.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| HW02_RS27015 () | 5635516..5635902 | + | 387 | WP_031806307.1 | TIGR03750 family conjugal transfer protein | - |
| HW02_RS27020 () | 5635899..5636558 | + | 660 | WP_042911446.1 | TIGR03746 family integrating conjugative element protein | - |
| HW02_RS27025 () | 5636555..5637439 | + | 885 | WP_058176528.1 | TIGR03749 family integrating conjugative element protein | - |
| HW02_RS27030 () | 5637423..5638928 | + | 1506 | WP_003121021.1 | TIGR03752 family integrating conjugative element protein | - |
| HW02_RS27035 () | 5638906..5639349 | + | 444 | WP_003121022.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| HW02_RS27040 () | 5639349..5642291 | + | 2943 | WP_059319174.1 | conjugative transfer ATPase | - |
| HW02_RS27045 () | 5642288..5642572 | + | 285 | WP_003099860.1 | hypothetical protein | - |
| HW02_RS27050 () | 5642569..5643228 | + | 660 | WP_059319175.1 | DsbA family protein | - |
| HW02_RS27055 () | 5643225..5643443 | - | 219 | WP_003158150.1 | hypothetical protein | - |
| HW02_RS27065 () | 5644002..5645189 | + | 1188 | WP_003159689.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| HW02_RS27070 () | 5645212..5645634 | + | 423 | WP_003125089.1 | DUF1641 domain-containing protein | - |
| HW02_RS27075 () | 5645624..5646490 | + | 867 | WP_003158148.1 | methyltransferase domain-containing protein | - |
| HW02_RS27080 () | 5646628..5647059 | + | 432 | WP_003158147.1 | TIGR03757 family integrating conjugative element protein | - |
| HW02_RS27085 () | 5647059..5647997 | + | 939 | WP_003159688.1 | TIGR03756 family integrating conjugative element protein | - |
| HW02_RS27090 () | 5648015..5649397 | + | 1383 | WP_003159687.1 | integrating conjugative element protein | - |
| HW02_RS27095 () | 5649397..5649744 | + | 348 | WP_003125096.1 | hypothetical protein | - |
| HW02_RS27100 () | 5649741..5651255 | + | 1515 | WP_059319176.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| HW02_RS27105 () | 5651423..5651650 | - | 228 | Protein_5246 | hypothetical protein | - |
| HW02_RS27110 () | 5651769..5652041 | + | 273 | WP_003086148.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| HW02_RS27115 () | 5652045..5652398 | + | 354 | WP_057386860.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HW02_RS27120 () | 5652425..5653339 | - | 915 | WP_003119431.1 | hypothetical protein | - |
| HW02_RS27125 () | 5653365..5653604 | - | 240 | WP_010792230.1 | hypothetical protein | - |
| HW02_RS27130 () | 5653988..5655238 | + | 1251 | WP_003119430.1 | IS256 family transposase ISRso7 | Transposase |
| HW02_RS27135 () | 5655398..5657320 | + | 1923 | WP_022580137.1 | helicase/relaxase domain-containing protein | - |
| HW02_RS27140 () | 5657317..5658618 | + | 1302 | WP_003454526.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| HW02_RS27160 () | 5659437..5662001 | - | 2565 | WP_003145976.1 | ATP-dependent chaperone ClpB | - |
| HW02_RS27165 () | 5662157..5662885 | - | 729 | WP_003102588.1 | peptidoglycan editing factor PgeF | - |
| HW02_RS27170 () | 5662882..5663844 | - | 963 | WP_003094686.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|