MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 81634 bp
Accession: NZ_CP008861 Location: 5739208..5820841 Organism: Pseudomonas aeruginosa strain H47921 Replicon: chromosome
Accession: NZ_CP008861 Location: 5739208..5820841 Organism: Pseudomonas aeruginosa strain H47921 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HW05_RS26315 () | 5734869..5736167 | + | 1299 | WP_003086128.1 | Tol-Pal system protein TolB | - |
| HW05_RS26320 () | 5736220..5736726 | + | 507 | WP_003111417.1 | peptidoglycan-associated lipoprotein Pal | - |
| HW05_RS26325 () | 5736736..5737560 | + | 825 | WP_012614422.1 | tol-pal system protein YbgF | - |
| HW05_RS26330 () | 5737780..5738427 | + | 648 | WP_003112571.1 | 7-carboxy-7-deazaguanine synthase QueE | - |
| HW05_RS26335 () | 5738443..5739117 | + | 675 | WP_003111415.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| HW05_RS26345 () | 5739623..5740903 | - | 1281 | WP_016852952.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| HW05_RS26350 () | 5740900..5742819 | - | 1920 | WP_016852953.1 | helicase/relaxase domain-containing protein | - |
| HW05_RS26355 () | 5743149..5743499 | - | 351 | WP_023122676.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HW05_RS26360 () | 5743503..5743775 | - | 273 | WP_023122675.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| HW05_RS33335 () | 5743894..5744217 | + | 324 | WP_071533856.1 | hypothetical protein | - |
| HW05_RS26365 () | 5744243..5745757 | - | 1515 | WP_016851630.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| HW05_RS26370 () | 5745754..5746101 | - | 348 | WP_016851629.1 | hypothetical protein | - |
| HW05_RS26375 () | 5746101..5747483 | - | 1383 | WP_023122674.1 | integrating conjugative element protein | - |
| HW05_RS26380 () | 5747501..5748439 | - | 939 | WP_016851627.1 | TIGR03756 family integrating conjugative element protein | - |
| HW05_RS26385 () | 5748439..5748870 | - | 432 | WP_003111736.1 | TIGR03757 family integrating conjugative element protein | - |
| HW05_RS26390 () | 5749369..5752335 | - | 2967 | WP_011005944.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| HW05_RS26395 () | 5752339..5752899 | - | 561 | WP_014003957.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| HW05_RS26400 () | 5752902..5753366 | - | 465 | WP_059309789.1 | hypothetical protein | - |
| HW05_RS26405 () | 5753807..5754373 | - | 567 | WP_004574805.1 | OsmC family protein | - |
| HW05_RS26410 () | 5754388..5755164 | - | 777 | WP_004574804.1 | 3-alpha-hydroxycholanate dehydrogenase (NADP(+)) | VF |
| HW05_RS26415 () | 5755224..5755808 | - | 585 | WP_004574803.1 | Biofilm operon icaADBC HTH-type negative transcriptional regulator IcaR | VF |
| HW05_RS32680 () | 5755805..5756485 | - | 681 | WP_004574802.1 | cupin domain-containing protein | - |
| HW05_RS26435 () | 5758332..5758550 | + | 219 | WP_003109406.1 | hypothetical protein | - |
| HW05_RS26440 () | 5758547..5759206 | - | 660 | WP_003109405.1 | DsbA family protein | - |
| HW05_RS26445 () | 5759203..5759487 | - | 285 | WP_003099860.1 | hypothetical protein | - |
| HW05_RS26450 () | 5759484..5762426 | - | 2943 | WP_010792229.1 | conjugative transfer ATPase | - |
| HW05_RS26455 () | 5762426..5762869 | - | 444 | WP_003121022.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| HW05_RS26460 () | 5762847..5764352 | - | 1506 | WP_003121021.1 | TIGR03752 family integrating conjugative element protein | - |
| HW05_RS26465 () | 5764336..5765220 | - | 885 | WP_003121020.1 | TIGR03749 family integrating conjugative element protein | - |
| HW05_RS26470 () | 5765217..5765876 | - | 660 | WP_003117079.1 | TIGR03746 family integrating conjugative element protein | - |
| HW05_RS26475 () | 5765873..5766259 | - | 387 | WP_003117078.1 | TIGR03750 family conjugal transfer protein | - |
| HW05_RS26480 () | 5766270..5766626 | - | 357 | WP_003117077.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| HW05_RS26485 () | 5766644..5766883 | - | 240 | WP_003121019.1 | TIGR03758 family integrating conjugative element protein | - |
| HW05_RS26490 () | 5766880..5767218 | - | 339 | WP_003158157.1 | RAQPRD family integrative conjugative element protein | - |
| HW05_RS26495 () | 5767312..5767611 | - | 300 | WP_003117075.1 | hypothetical protein | - |
| HW05_RS32685 () | 5767784..5768095 | + | 312 | WP_003117074.1 | DUF2845 domain-containing protein | - |
| HW05_RS33340 () | 5768141..5769250 | - | 1110 | WP_003121016.1 | hypothetical protein | - |
| HW05_RS26505 () | 5769382..5770863 | - | 1482 | WP_003117073.1 | UvrD-helicase domain-containing protein | - |
| HW05_RS26510 () | 5771105..5771596 | - | 492 | WP_003099826.1 | hypothetical protein | - |
| HW05_RS26515 () | 5771614..5772360 | - | 747 | WP_003099824.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| HW05_RS26520 () | 5772360..5774591 | - | 2232 | WP_003099821.1 | type IV conjugative transfer system coupling protein TraD | - |
| HW05_RS26525 () | 5774595..5774801 | - | 207 | WP_073689213.1 | hypothetical protein | - |
| HW05_RS26530 () | 5774873..5775373 | - | 501 | WP_003099819.1 | integrating conjugative element protein | - |
| HW05_RS26535 () | 5775370..5775951 | - | 582 | WP_003117072.1 | hypothetical protein | VF |
| HW05_RS26540 () | 5775936..5776691 | - | 756 | WP_003099814.1 | TIGR03759 family integrating conjugative element protein | - |
| HW05_RS26545 () | 5776702..5777400 | - | 699 | WP_023094353.1 | hypothetical protein | - |
| HW05_RS26550 () | 5777618..5777890 | + | 273 | WP_003125312.1 | hypothetical protein | - |
| HW05_RS32690 () | 5778717..5779040 | - | 324 | WP_003158159.1 | hypothetical protein | - |
| HW05_RS26555 () | 5779059..5779451 | - | 393 | WP_003158160.1 | hypothetical protein | - |
| HW05_RS26560 () | 5780003..5780599 | - | 597 | WP_003158161.1 | VWA domain-containing protein | - |
| HW05_RS33345 () | 5780584..5781168 | - | 585 | WP_044265603.1 | hypothetical protein | - |
| HW05_RS26570 () | 5781193..5781567 | - | 375 | WP_003158163.1 | hypothetical protein | - |
| HW05_RS26575 () | 5782431..5783114 | - | 684 | WP_003158165.1 | SOS response-associated peptidase family protein | - |
| HW05_RS26580 () | 5783219..5783649 | + | 431 | Protein_5287 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| HW05_RS33140 () | 5783675..5783836 | - | 162 | Protein_5288 | helicase | - |
| HW05_RS26590 () | 5783942..5785387 | - | 1446 | WP_003158168.1 | class I SAM-dependent methyltransferase | - |
| HW05_RS26595 () | 5785417..5786022 | - | 606 | WP_003158169.1 | hypothetical protein | - |
| HW05_RS26600 () | 5786115..5786369 | - | 255 | WP_003117062.1 | hypothetical protein | - |
| HW05_RS26605 () | 5786437..5786799 | - | 363 | WP_003117061.1 | hypothetical protein | - |
| HW05_RS26610 () | 5786869..5787144 | - | 276 | WP_003117060.1 | hypothetical protein | - |
| HW05_RS26615 () | 5787141..5787773 | - | 633 | WP_003158170.1 | DUF3275 family protein | - |
| HW05_RS26620 () | 5787830..5788180 | - | 351 | WP_003099791.1 | hypothetical protein | - |
| HW05_RS26625 () | 5788416..5789123 | - | 708 | WP_003117058.1 | hypothetical protein | - |
| HW05_RS26635 () | 5789608..5789805 | - | 198 | WP_003117057.1 | hypothetical protein | - |
| HW05_RS33350 () | 5789879..5790037 | - | 159 | WP_003109368.1 | hypothetical protein | - |
| HW05_RS26640 () | 5790175..5790654 | - | 480 | WP_003117056.1 | DUF3577 domain-containing protein | - |
| HW05_RS33355 () | 5791115..5791288 | - | 174 | WP_003158172.1 | hypothetical protein | - |
| HW05_RS33360 () | 5791363..5791608 | - | 246 | WP_003117055.1 | hypothetical protein | - |
| HW05_RS26650 () | 5792671..5793108 | - | 438 | WP_003117054.1 | hypothetical protein | VF |
| HW05_RS26655 () | 5793126..5794505 | - | 1380 | WP_003117053.1 | hypothetical protein | VF |
| HW05_RS26660 () | 5794498..5795454 | - | 957 | WP_003117051.1 | Twitching mobility protein | VF |
| HW05_RS26665 () | 5795451..5795981 | - | 531 | WP_023122673.1 | type IV B pilus protein | - |
| HW05_RS26670 () | 5796003..5797082 | - | 1080 | WP_003099764.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| HW05_RS26675 () | 5797082..5798662 | - | 1581 | WP_003099761.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| HW05_RS26680 () | 5798671..5799204 | - | 534 | WP_003099760.1 | type IV pilus biogenesis protein PilP | - |
| HW05_RS26685 () | 5799194..5800519 | - | 1326 | WP_003099758.1 | type 4b pilus protein PilO2 | - |
| HW05_RS26690 () | 5800523..5802232 | - | 1710 | WP_012076860.1 | Outer membrane lipoprotein BfpB | VF |
| HW05_RS26695 () | 5802232..5803356 | - | 1125 | WP_012076859.1 | hypothetical protein | VF |
| HW05_RS26700 () | 5803558..5803857 | + | 300 | WP_003120987.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HW05_RS26705 () | 5803854..5804144 | + | 291 | WP_003448662.1 | putative addiction module antidote protein | Antitoxin Detail |
| HW05_RS26710 () | 5804215..5804559 | - | 345 | WP_016851612.1 | hypothetical protein | - |
| HW05_RS26715 () | 5804700..5806676 | - | 1977 | WP_016851611.1 | DEAD/DEAH box helicase | - |
| HW05_RS26720 () | 5806673..5808562 | - | 1890 | WP_016851610.1 | hypothetical protein | - |
| HW05_RS26725 () | 5808784..5808993 | - | 210 | WP_003105733.1 | cold-shock protein | - |
| HW05_RS26730 () | 5809300..5810640 | - | 1341 | Protein_5318 | DNA topoisomerase I | - |
| HW05_RS26735 () | 5810837..5811640 | - | 804 | WP_013983152.1 | IS21 family transposase ISPst3 | Transposase |
| HW05_RS26740 () | 5811633..5813132 | - | 1500 | WP_105264318.1 | IS21 family transposase ISPst3 | Transposase |
| HW05_RS26745 () | 5813251..5813832 | - | 582 | Protein_5321 | DNA topoisomerase I | - |
| HW05_RS32715 () | 5813948..5814115 | - | 168 | WP_170323396.1 | CrpP family protein | - |
| HW05_RS26750 () | 5814360..5814554 | - | 195 | WP_016851608.1 | hypothetical protein | - |
| HW05_RS26755 () | 5814660..5815118 | - | 459 | WP_016851607.1 | single-stranded DNA-binding protein | - |
| HW05_RS26760 () | 5815262..5816761 | + | 1500 | WP_105264318.1 | IS21 family transposase ISPst3 | Transposase |
| HW05_RS26765 () | 5816754..5817557 | + | 804 | WP_013983152.1 | IS21 family transposase ISPst3 | Transposase |
| HW05_RS32725 () | 5817740..5817955 | - | 216 | WP_144440662.1 | hypothetical protein | - |
| HW05_RS26770 () | 5817952..5818605 | - | 654 | WP_016852971.1 | hypothetical protein | - |
| HW05_RS26775 () | 5818611..5819102 | - | 492 | WP_016852972.1 | hypothetical protein | - |
| HW05_RS26780 () | 5819099..5819836 | - | 738 | WP_016852973.1 | hypothetical protein | - |
| HW05_RS26785 () | 5819838..5820704 | - | 867 | WP_003120956.1 | ParA family protein | - |
| HW05_RS26790 () | 5821228..5821632 | + | 405 | WP_003112559.1 | acyl-CoA thioesterase | - |
| HW05_RS26795 () | 5821753..5822313 | - | 561 | WP_003117022.1 | hypothetical protein | - |
| HW05_RS26800 () | 5822698..5823336 | - | 639 | WP_003120654.1 | NUDIX hydrolase | - |
| HW05_RS26805 () | 5823920..5824297 | + | 378 | WP_003117019.1 | Hpt domain-containing protein | - |
| HW05_RS26810 () | 5824740..5825351 | + | 612 | WP_004348355.1 | type 1 fimbrial protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|