MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 116214 bp
Accession: NZ_CP008856 Location: 5221858..5338071 Organism: Pseudomonas aeruginosa strain F23197 Replicon: chromosome
Accession: NZ_CP008856 Location: 5221858..5338071 Organism: Pseudomonas aeruginosa strain F23197 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HW10_RS24485 () | 5217376..5221629 | + | 4254 | WP_033936290.1 | two-partner secretion system exoprotein TpsA4 | - |
| HW10_RS24490 () | 5221996..5222862 | + | 867 | WP_003111785.1 | ParA family protein | - |
| HW10_RS24495 () | 5222864..5223601 | + | 738 | WP_003117024.1 | hypothetical protein | - |
| HW10_RS24500 () | 5223598..5224095 | + | 498 | WP_003111783.1 | hypothetical protein | - |
| HW10_RS24505 () | 5224101..5224802 | + | 702 | WP_015503560.1 | DUF2786 domain-containing protein | - |
| HW10_RS24510 () | 5224921..5226264 | + | 1344 | WP_003117027.1 | replicative DNA helicase | - |
| HW10_RS30900 () | 5226703..5227149 | - | 447 | WP_003117028.1 | hypothetical protein | - |
| HW10_RS24525 () | 5227502..5228028 | + | 527 | Protein_4744 | hypothetical protein | - |
| HW10_RS24530 () | 5228025..5228282 | + | 258 | WP_003117031.1 | hypothetical protein | - |
| HW10_RS30715 () | 5228275..5228769 | + | 495 | WP_004347979.1 | hypothetical protein | - |
| HW10_RS24540 () | 5228762..5228995 | + | 234 | WP_003103841.1 | hypothetical protein | - |
| HW10_RS24545 () | 5228995..5230017 | + | 1023 | WP_003117033.1 | nucleoid-associated protein YejK | - |
| HW10_RS24550 () | 5230014..5230904 | + | 891 | WP_058167156.1 | DNA adenine methylase | - |
| HW10_RS24555 () | 5230925..5231194 | + | 270 | WP_003117035.1 | Arc family DNA-binding protein | - |
| HW10_RS24560 () | 5231191..5232927 | + | 1737 | WP_003117036.1 | ParB family protein | - |
| HW10_RS24565 () | 5232955..5233722 | + | 768 | WP_003117037.1 | DUF2857 domain-containing protein | - |
| HW10_RS24570 () | 5233719..5235038 | + | 1320 | WP_059303268.1 | hypothetical protein | - |
| HW10_RS24575 () | 5236587..5237315 | + | 729 | WP_003117039.1 | TIGR03761 family integrating conjugative element protein | - |
| HW10_RS24580 () | 5237321..5237869 | + | 549 | WP_003117040.1 | DUF3158 family protein | - |
| HW10_RS24585 () | 5237917..5238759 | + | 843 | WP_003117041.1 | Rha family transcriptional regulator | - |
| HW10_RS24590 () | 5238789..5239277 | + | 489 | WP_059303267.1 | single-stranded DNA-binding protein | - |
| HW10_RS24600 () | 5239693..5239860 | + | 168 | WP_147318654.1 | CrpP family protein | - |
| HW10_RS24605 () | 5239976..5241895 | + | 1920 | WP_033973126.1 | type I DNA topoisomerase | - |
| HW10_RS24610 () | 5241969..5242439 | + | 471 | WP_071536306.1 | hypothetical protein | - |
| HW10_RS24615 () | 5242573..5244462 | + | 1890 | WP_023093023.1 | hypothetical protein | - |
| HW10_RS24620 () | 5244459..5246429 | + | 1971 | WP_058181085.1 | DEAD/DEAH box helicase | - |
| HW10_RS30720 () | 5246779..5247399 | + | 621 | WP_139274639.1 | hypothetical protein | - |
| HW10_RS24625 () | 5247511..5248632 | + | 1122 | WP_059303266.1 | hypothetical protein | VF |
| HW10_RS24630 () | 5248632..5250341 | + | 1710 | WP_059303265.1 | Outer membrane lipoprotein BfpB | VF |
| HW10_RS24635 () | 5250345..5251670 | + | 1326 | WP_058130308.1 | type 4b pilus protein PilO2 | - |
| HW10_RS24640 () | 5251660..5252193 | + | 534 | WP_059303264.1 | type IV pilus biogenesis protein PilP | - |
| HW10_RS24645 () | 5252202..5253782 | + | 1581 | WP_034036276.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| HW10_RS24650 () | 5253782..5254861 | + | 1080 | WP_003109360.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| HW10_RS24655 () | 5254883..5255413 | + | 531 | WP_003099765.1 | hypothetical protein | VF |
| HW10_RS24660 () | 5255410..5256351 | + | 942 | WP_003109361.1 | Flp pilus assembly complex ATPase component TadA | - |
| HW10_RS24665 () | 5256356..5257684 | + | 1329 | WP_004352824.1 | hypothetical protein | VF |
| HW10_RS24670 () | 5257713..5258150 | + | 438 | WP_009875868.1 | hypothetical protein | VF |
| HW10_RS30905 () | 5259214..5259459 | + | 246 | WP_009875867.1 | hypothetical protein | - |
| HW10_RS30910 () | 5259534..5259710 | + | 177 | WP_015503587.1 | hypothetical protein | - |
| HW10_RS24685 () | 5260171..5260650 | + | 480 | WP_009875866.1 | DUF3577 domain-containing protein | - |
| HW10_RS30915 () | 5260788..5260946 | + | 159 | WP_003109368.1 | hypothetical protein | - |
| HW10_RS24690 () | 5261020..5261217 | + | 198 | WP_009315817.1 | hypothetical protein | - |
| HW10_RS24700 () | 5261702..5262409 | + | 708 | WP_059303263.1 | hypothetical protein | - |
| HW10_RS24705 () | 5262645..5262995 | + | 351 | WP_033992391.1 | hypothetical protein | - |
| HW10_RS24710 () | 5263052..5263843 | + | 792 | WP_059303262.1 | DUF3275 family protein | - |
| HW10_RS24715 () | 5263946..5264308 | + | 363 | WP_003117061.1 | hypothetical protein | - |
| HW10_RS24720 () | 5264376..5264630 | + | 255 | WP_033937081.1 | hypothetical protein | - |
| HW10_RS24725 () | 5264724..5265329 | + | 606 | WP_049239287.1 | hypothetical protein | - |
| HW10_RS24730 () | 5265359..5266804 | + | 1446 | WP_059303261.1 | class I SAM-dependent methyltransferase | - |
| HW10_RS24735 () | 5266909..5269158 | + | 2250 | WP_126634615.1 | DEAD/DEAH box helicase | - |
| HW10_RS24740 () | 5269305..5269529 | + | 225 | Protein_4787 | IS3 family transposase ISPa20 | Transposase |
| HW10_RS24745 () | 5269681..5272648 | - | 2968 | Protein_4788 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| HW10_RS24750 () | 5272900..5273931 | + | 1032 | WP_073700136.1 | hypothetical protein | - |
| HW10_RS24755 () | 5273942..5274607 | + | 666 | WP_075116957.1 | DUF3218 family protein | - |
| HW10_RS30920 () | 5275029..5275364 | + | 336 | WP_172403162.1 | hypothetical protein | - |
| HW10_RS24765 () | 5275421..5275981 | - | 561 | WP_023102601.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| HW10_RS24770 () | 5276233..5276505 | + | 273 | WP_023102602.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| HW10_RS24775 () | 5276505..5276780 | + | 276 | WP_023102603.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HW10_RS24780 () | 5277021..5277656 | - | 636 | WP_023102604.1 | hypothetical protein | - |
| HW10_RS24785 () | 5277656..5279527 | - | 1872 | WP_059303259.1 | hypothetical protein | - |
| HW10_RS24790 () | 5279499..5281616 | - | 2118 | WP_023102606.1 | hypothetical protein | - |
| HW10_RS24795 () | 5281911..5282225 | + | 315 | WP_059303258.1 | IS3 family transposase ISDps1 | Transposase |
| HW10_RS24800 () | 5282222..5283088 | + | 867 | WP_004352797.1 | IS3 family transposase ISPosp5 | Transposase |
| HW10_RS24805 () | 5283118..5283891 | - | 774 | Protein_4800 | hypothetical protein ; Integrase | Integrase |
| HW10_RS24815 () | 5284430..5284645 | - | 216 | WP_003159697.1 | 4-oxalocrotonate tautomerase family protein | - |
| HW10_RS24820 () | 5284695..5285792 | - | 1098 | WP_019726860.1 | alkene reductase | - |
| HW10_RS24825 () | 5285834..5286388 | - | 555 | WP_019726861.1 | OsmC family protein | - |
| HW10_RS24830 () | 5286456..5287127 | - | 672 | WP_019727266.1 | DsbA family oxidoreductase | - |
| HW10_RS24835 () | 5287180..5287521 | - | 342 | WP_024928862.1 | carboxymuconolactone decarboxylase family protein | - |
| HW10_RS24840 () | 5287616..5288176 | - | 561 | WP_019726864.1 | TetR/AcrR family transcriptional regulator | - |
| HW10_RS24845 () | 5288238..5289023 | - | 786 | WP_019726865.1 | 3-alpha-hydroxycholanate dehydrogenase (NADP(+)) | VF |
| HW10_RS24850 () | 5289180..5289593 | - | 414 | WP_023093047.1 | hypothetical protein | - |
| HW10_RS24855 () | 5289586..5290146 | - | 561 | Protein_4809 | integrase | - |
| HW10_RS24860 () | 5290449..5291587 | + | 1139 | WP_088376620.1 | IS3 family transposase ISPa32 | Transposase |
| HW10_RS24865 () | 5291838..5292527 | + | 690 | WP_023093050.1 | hypothetical protein | - |
| HW10_RS24870 () | 5292538..5293293 | + | 756 | WP_023093051.1 | TIGR03759 family integrating conjugative element protein | - |
| HW10_RS24875 () | 5293278..5293859 | + | 582 | WP_015648301.1 | hypothetical protein | VF |
| HW10_RS24880 () | 5293856..5294356 | + | 501 | WP_059303257.1 | integrating conjugative element protein | - |
| HW10_RS24885 () | 5294365..5294634 | + | 270 | WP_023092918.1 | hypothetical protein | - |
| HW10_RS24890 () | 5294638..5296869 | + | 2232 | WP_012076864.1 | type IV conjugative transfer system coupling protein TraD | - |
| HW10_RS24895 () | 5296869..5297615 | + | 747 | WP_023129326.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| HW10_RS24900 () | 5297626..5299107 | + | 1482 | WP_059303256.1 | UvrD-helicase domain-containing protein | - |
| HW10_RS30925 () | 5299239..5300348 | + | 1110 | WP_023093054.1 | hypothetical protein | - |
| HW10_RS24910 () | 5300393..5300704 | - | 312 | WP_003117074.1 | DUF2845 domain-containing protein | - |
| HW10_RS24915 () | 5300877..5301176 | + | 300 | WP_003109393.1 | hypothetical protein | - |
| HW10_RS24920 () | 5301269..5301607 | + | 339 | WP_020751097.1 | RAQPRD family integrative conjugative element protein | - |
| HW10_RS24925 () | 5301604..5301843 | + | 240 | WP_023443559.1 | TIGR03758 family integrating conjugative element protein | - |
| HW10_RS24930 () | 5301861..5302217 | + | 357 | WP_003117077.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| HW10_RS24935 () | 5302228..5302614 | + | 387 | WP_003117078.1 | TIGR03750 family conjugal transfer protein | - |
| HW10_RS24940 () | 5302611..5303270 | + | 660 | WP_003117079.1 | TIGR03746 family integrating conjugative element protein | - |
| HW10_RS24945 () | 5303267..5304151 | + | 885 | WP_003117080.1 | TIGR03749 family integrating conjugative element protein | - |
| HW10_RS24950 () | 5304135..5305640 | + | 1506 | WP_019416328.1 | TIGR03752 family integrating conjugative element protein | - |
| HW10_RS24955 () | 5305618..5306061 | + | 444 | WP_003121022.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| HW10_RS24960 () | 5306061..5309003 | + | 2943 | WP_025981583.1 | conjugative transfer ATPase | - |
| HW10_RS24965 () | 5309000..5309284 | + | 285 | WP_019726875.1 | hypothetical protein | - |
| HW10_RS24970 () | 5309281..5309940 | + | 660 | WP_003109405.1 | DsbA family protein | - |
| HW10_RS24975 () | 5309937..5310155 | - | 219 | WP_003109406.1 | hypothetical protein | - |
| HW10_RS24990 () | 5312292..5312723 | + | 432 | WP_003111736.1 | TIGR03757 family integrating conjugative element protein | - |
| HW10_RS24995 () | 5312723..5313661 | + | 939 | WP_003117084.1 | TIGR03756 family integrating conjugative element protein | - |
| HW10_RS25000 () | 5313679..5315067 | + | 1389 | WP_004352770.1 | integrating conjugative element protein | - |
| HW10_RS25005 () | 5315067..5315414 | + | 348 | WP_003117086.1 | hypothetical protein | - |
| HW10_RS25010 () | 5315411..5316946 | + | 1536 | WP_003117087.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| HW10_RS25015 () | 5316976..5317329 | - | 354 | WP_071534128.1 | hypothetical protein | - |
| HW10_RS25020 () | 5317448..5317720 | + | 273 | WP_003086148.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| HW10_RS25025 () | 5317724..5318065 | + | 342 | Protein_4841 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HW10_RS25030 () | 5318611..5320347 | + | 1737 | WP_058017044.1 | N-6 DNA methylase | - |
| HW10_RS25035 () | 5320400..5323186 | + | 2787 | WP_124086756.1 | hypothetical protein | - |
| HW10_RS25040 () | 5323183..5327385 | + | 4203 | WP_058017042.1 | helicase | - |
| HW10_RS25045 () | 5327387..5329612 | + | 2226 | WP_058017041.1 | hypothetical protein | - |
| HW10_RS25050 () | 5329602..5330762 | + | 1161 | WP_158699610.1 | DUF4263 domain-containing protein | - |
| HW10_RS30725 () | 5330834..5331995 | - | 1162 | Protein_4847 | IS3 family transposase | - |
| HW10_RS30730 () | 5332073..5332573 | + | 501 | WP_124086832.1 | hypothetical protein | - |
| HW10_RS30735 () | 5332807..5333387 | - | 581 | Protein_4849 | hypothetical protein | - |
| HW10_RS25075 () | 5333468..5333965 | - | 498 | WP_070746939.1 | hypothetical protein | - |
| HW10_RS25080 () | 5334460..5336379 | + | 1920 | WP_059303255.1 | helicase/relaxase domain-containing protein | - |
| HW10_RS25085 () | 5336376..5337656 | + | 1281 | WP_059303254.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| HW10_RS25105 () | 5338509..5341073 | - | 2565 | WP_003094682.1 | ATP-dependent chaperone ClpB | - |
| HW10_RS25110 () | 5341229..5341957 | - | 729 | WP_033937143.1 | peptidoglycan editing factor PgeF | - |
| HW10_RS25115 () | 5341954..5342916 | - | 963 | WP_003094686.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|