MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 37447 bp
Accession: NZ_CP008807 Location: 1..37447 Organism: Escherichia coli O157:H7 str. SS17 Replicon: plasmid pSS17
Accession: NZ_CP008807 Location: 1..37447 Organism: Escherichia coli O157:H7 str. SS17 Replicon: plasmid pSS17
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SS17_RS29020 () | 63..1103 | + | 1041 | WP_115448321.1 | replication initiation protein | - |
| SS17_RS29025 () | 1226..1495 | + | 270 | WP_000190069.1 | hypothetical protein | - |
| SS17_RS29030 () | 1757..2029 | + | 273 | WP_012552797.1 | hypothetical protein | - |
| SS17_RS29035 () | 2474..3451 | + | 978 | WP_001021612.1 | type IV secretion system protein | - |
| SS17_RS29040 () | 3453..3677 | + | 225 | WP_000758236.1 | EexN family lipoprotein | - |
| SS17_RS29045 () | 3677..4318 | + | 642 | WP_000910600.1 | conjugal transfer protein TrbJ | - |
| SS17_RS29050 () | 4386..4997 | + | 612 | WP_040126096.1 | Type IV secretion system protein virB1 | VF |
| SS17_RS29055 () | 4990..5283 | + | 294 | WP_001031683.1 | TrbC/VirB2 family protein | - |
| SS17_RS29060 () | 5341..5661 | + | 321 | WP_001000141.1 | VirB3 family type IV secretion system protein | - |
| SS17_RS29065 () | 5664..8036 | + | 2373 | WP_001195522.1 | VirB4 family type IV secretion system protein | - |
| SS17_RS29070 () | 8167..8904 | + | 738 | WP_000364525.1 | Type IV secretion system protein PtlE | VF |
| SS17_RS29075 () | 8901..9680 | + | 780 | WP_000592647.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| SS17_RS29080 () | 9670..10812 | + | 1143 | WP_000787415.1 | Type IV secretion system protein virB10 | VF |
| SS17_RS29085 () | 10812..11831 | + | 1020 | WP_001287983.1 | Type IV secretion system protein VirB11 | VF |
| SS17_RS29090 () | 11882..13849 | + | 1968 | WP_000726939.1 | type IV secretory system conjugative DNA transfer family protein | - |
| SS17_RS29095 () | 13865..14164 | + | 300 | Protein_15 | conjugal transfer protein | - |
| SS17_RS34245 () | 14270..15040 | + | 771 | Protein_16 | hypothetical protein | - |
| SS17_RS34250 () | 15572..15892 | + | 321 | Protein_17 | YadA-like family protein | - |
| SS17_RS29105 () | 15922..16149 | + | 228 | WP_000855411.1 | hypothetical protein | - |
| SS17_RS29110 () | 16274..16861 | + | 588 | WP_000280693.1 | hypothetical protein | - |
| SS17_RS29115 () | 16873..19029 | + | 2157 | WP_040126097.1 | type IA DNA topoisomerase | - |
| SS17_RS29120 () | 19192..19377 | + | 186 | WP_000425267.1 | hypothetical protein | - |
| SS17_RS32870 () | 19709..20005 | + | 297 | WP_000753311.1 | hypothetical protein | - |
| SS17_RS29135 () | 20877..21680 | + | 804 | WP_000525544.1 | sprT domain-containing protein | - |
| SS17_RS29140 () | 21716..21931 | + | 216 | WP_000434157.1 | hypothetical protein | - |
| SS17_RS29145 () | 21995..22276 | + | 282 | WP_001105057.1 | hypothetical protein | - |
| SS17_RS29150 () | 23182..23997 | + | 816 | WP_000018884.1 | Tyrosine recombinase XerD | VF |
| SS17_RS29155 () | 24112..24771 | + | 660 | WP_000516225.1 | peptidyl-arginine deiminase | - |
| SS17_RS29160 () | 25476..25778 | + | 303 | WP_001096503.1 | hypothetical protein | - |
| SS17_RS29165 () | 25814..26098 | + | 285 | WP_000928780.1 | hypothetical protein | - |
| SS17_RS32885 () | 26108..26407 | + | 300 | WP_012552802.1 | hypothetical protein | - |
| SS17_RS29170 () | 26456..29653 | - | 3198 | WP_040126098.1 | hypothetical protein | - |
| SS17_RS29175 () | 29650..29985 | - | 336 | WP_000963830.1 | hypothetical protein | Relaxase |
| SS17_RS29180 () | 30331..30738 | + | 408 | WP_001190619.1 | hypothetical protein | - |
| SS17_RS29185 () | 30748..31509 | + | 762 | WP_001097937.1 | conjugal transfer protein TraL | - |
| SS17_RS29190 () | 31506..32210 | + | 705 | WP_001279868.1 | hypothetical protein | - |
| SS17_RS29195 () | 32239..32676 | - | 438 | WP_000466317.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| SS17_RS29200 () | 32701..32883 | - | 183 | WP_000833471.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| SS17_RS29205 () | 33311..33589 | - | 279 | WP_000545934.1 | hypothetical protein | - |
| SS17_RS29210 () | 33647..33976 | - | 330 | WP_000449469.1 | hypothetical protein | - |
| SS17_RS29215 () | 34416..34658 | - | 243 | WP_001450803.1 | hypothetical protein | - |
| SS17_RS29220 () | 34648..34914 | - | 267 | WP_040126099.1 | hypothetical protein | - |
| SS17_RS29225 () | 34965..35189 | - | 225 | WP_000749827.1 | hypothetical protein | - |
| SS17_RS29230 () | 35285..35509 | - | 225 | WP_000866040.1 | hypothetical protein | - |
| SS17_RS29235 () | 35549..35872 | - | 324 | WP_000432877.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|