MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 78218 bp
Accession: NZ_CP008754 Location: 2335613..2413830 Organism: Burkholderia pseudomallei strain 9 Replicon: chromosome
Accession: NZ_CP008754 Location: 2335613..2413830 Organism: Burkholderia pseudomallei strain 9 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DP46_RS11805 () | 2333054..2333710 | + | 657 | WP_099975785.1 | hypothetical protein | - |
| DP46_RS11810 () | 2333791..2334399 | - | 609 | WP_004547950.1 | recombinase family protein | - |
| DP46_RS11815 () | 2334757..2335212 | + | 456 | Protein_2353 | restriction endonuclease subunit R | - |
| DP46_RS11820 () | 2335281..2336392 | + | 1112 | WP_085952178.1 | IS3-like element ISBp1 family transposase | - |
| DP46_RS11825 () | 2336859..2337152 | + | 294 | WP_009951458.1 | hypothetical protein | - |
| DP46_RS11830 () | 2337289..2337807 | + | 519 | WP_099975786.1 | hypothetical protein | - |
| DP46_RS11835 () | 2337860..2338111 | - | 252 | WP_009951454.1 | helix-turn-helix domain-containing protein | - |
| DP46_RS11840 () | 2338345..2338920 | + | 576 | WP_004547952.1 | hypothetical protein | - |
| DP46_RS11845 () | 2339085..2339396 | - | 312 | WP_009951452.1 | hypothetical protein | - |
| DP46_RS11850 () | 2339390..2340604 | - | 1215 | WP_004547111.1 | hypothetical protein | - |
| DP46_RS11855 () | 2340918..2341931 | - | 1014 | WP_004547089.1 | helix-turn-helix domain containing protein | - |
| DP46_RS11860 () | 2341931..2342068 | - | 138 | WP_004547122.1 | helix-turn-helix domain-containing protein | - |
| DP46_RS11865 () | 2342695..2343951 | - | 1257 | WP_038728098.1 | hypothetical protein ; Integrase | Integrase |
| DP46_RS11870 () | 2344267..2345466 | - | 1200 | WP_004537208.1 | IS3 family transposase ISBps2 | Transposase |
| DP46_RS11875 () | 2345463..2345612 | - | 150 | WP_004537646.1 | bacteriophage protein Gp44 | - |
| DP46_RS11880 () | 2345754..2346452 | + | 699 | WP_076805202.1 | hypothetical protein | - |
| DP46_RS11885 () | 2346642..2346896 | + | 255 | WP_004552959.1 | hypothetical protein | - |
| DP46_RS11890 () | 2346893..2347240 | - | 348 | WP_009946438.1 | hypothetical protein | - |
| DP46_RS11895 () | 2347475..2347582 | - | 108 | WP_009946436.1 | hypothetical protein | - |
| DP46_RS11900 () | 2347584..2347715 | - | 132 | WP_015967385.1 | hypothetical protein | - |
| DP46_RS11905 () | 2347725..2348000 | - | 276 | WP_004537565.1 | bacteriophage protein Gp49 | - |
| DP46_RS11910 () | 2348620..2348841 | + | 222 | WP_004547086.1 | BrnT family toxin | Toxin Detail |
| DP46_RS11915 () | 2348825..2349109 | + | 285 | WP_004525420.1 | BrnA antitoxin family protein | Antitoxin Detail |
| DP46_RS11920 () | 2349419..2349616 | - | 198 | WP_076823250.1 | hypothetical protein | - |
| DP46_RS11925 () | 2349527..2349766 | + | 240 | WP_004536695.1 | HNH endonuclease | - |
| DP46_RS11930 () | 2349756..2350139 | + | 384 | Protein_2376 | IS3 family transposase ISBps2 | Transposase |
| DP46_RS11935 () | 2350102..2350530 | + | 429 | Protein_2377 | IS110 family transposase | - |
| DP46_RS11940 () | 2350757..2350873 | - | 117 | Protein_2378 | IS3 family transposase ISBcen15 | Transposase |
| DP46_RS11945 () | 2351139..2352599 | + | 1461 | WP_004547073.1 | metallophosphoesterase | - |
| DP46_RS11950 () | 2352650..2354020 | + | 1371 | WP_011857641.1 | c-type cytochrome | - |
| DP46_RS11955 () | 2354177..2355109 | + | 933 | WP_009946455.1 | glycerophosphoryl diester phosphodiesterase | - |
| DP46_RS11960 () | 2355192..2355347 | - | 156 | Protein_2382 | capsule biosynthesis protein | - |
| DP46_RS11965 () | 2355307..2355500 | + | 194 | Protein_2383 | IS21 family transposase | - |
| DP46_RS11970 () | 2355501..2355671 | - | 171 | Protein_2384 | IS3 family transposase ISKpn40 | Transposase |
| DP46_RS11975 () | 2355553..2356248 | + | 696 | WP_111963057.1 | IS3 family transposase ISKpn40 | Transposase |
| DP46_RS11980 () | 2356275..2357009 | - | 735 | WP_004525427.1 | hypothetical protein | - |
| DP46_RS11985 () | 2357000..2369395 | - | 12396 | WP_076910177.1 | LysM peptidoglycan-binding domain-containing protein | - |
| DP46_RS11990 () | 2369379..2372957 | - | 3579 | WP_009946465.1 | hypothetical protein | - |
| DP46_RS11995 () | 2373075..2373851 | - | 777 | WP_076910176.1 | hypothetical protein | - |
| DP46_RS12000 () | 2373884..2374631 | - | 748 | Protein_2390 | DUF3596 domain-containing protein | - |
| DP46_RS12005 () | 2374845..2375252 | + | 408 | WP_004525432.1 | hypothetical protein | - |
| DP46_RS12010 () | 2375491..2377203 | + | 1713 | WP_023358470.1 | thiamine pyrophosphate-binding protein | - |
| DP46_RS12015 () | 2377362..2380349 | - | 2988 | WP_004547090.1 | YjbH domain-containing protein | - |
| DP46_RS12020 () | 2380351..2380995 | - | 645 | WP_004537658.1 | YjbF family lipoprotein | - |
| DP46_RS12025 () | 2381088..2381444 | + | 357 | WP_004547107.1 | hypothetical protein | - |
| DP46_RS12030 () | 2381644..2381922 | + | 279 | WP_009946470.1 | hypothetical protein | - |
| DP46_RS12035 () | 2381863..2382060 | - | 198 | WP_004547104.1 | hypothetical protein | - |
| DP46_RS12040 () | 2382314..2384872 | + | 2559 | WP_076910175.1 | SLBB domain-containing protein | - |
| DP46_RS12045 () | 2384877..2386094 | + | 1218 | WP_004529927.1 | transport-related membrane protein | - |
| DP46_RS12050 () | 2386091..2386867 | + | 777 | WP_009946475.1 | Glucose-1-phosphate adenylyltransferase | VF |
| DP46_RS12055 () | 2386870..2387943 | + | 1074 | WP_004529928.1 | GDP-mannose 4,6-dehydratase | VF |
| DP46_RS12060 () | 2387951..2389303 | + | 1353 | WP_004525442.1 | lipopolysaccharide biosynthesis protein RfbH | - |
| DP46_RS12065 () | 2389329..2391089 | + | 1761 | WP_004538059.1 | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | VF |
| DP46_RS12070 () | 2391129..2391341 | + | 213 | WP_004535184.1 | hypothetical protein | - |
| DP46_RS12075 () | 2391338..2392693 | + | 1356 | WP_004530747.1 | hypothetical protein | - |
| DP46_RS12080 () | 2392690..2393751 | + | 1062 | WP_076809408.1 | glycosyltransferase family 2 protein | - |
| DP46_RS12085 () | 2393924..2395180 | + | 1257 | WP_004547080.1 | glycosyltransferase family 9 protein | - |
| DP46_RS12090 () | 2395086..2396141 | + | 1056 | WP_076910174.1 | glycosyltransferase family 9 protein | - |
| DP46_RS12095 () | 2396134..2396703 | + | 570 | WP_004525449.1 | O-acetyltransferase | - |
| DP46_RS12100 () | 2396715..2397761 | + | 1047 | WP_004525450.1 | glycosyltransferase | - |
| DP46_RS12105 () | 2397765..2398814 | + | 1050 | WP_004529935.1 | hypothetical protein | - |
| DP46_RS12110 () | 2399166..2399681 | - | 516 | Protein_2412 | ClbS/DfsB family four-helix bundle protein | - |
| DP46_RS12115 () | 2399768..2400667 | - | 900 | WP_004542645.1 | HTH-type transcriptional regulator ArgP | VF |
| DP46_RS12120 () | 2400797..2401522 | + | 726 | WP_004525454.1 | pirin family protein | - |
| DP46_RS12125 () | 2401824..2402504 | + | 681 | WP_004547133.1 | DUF1275 family protein | - |
| DP46_RS12130 () | 2402534..2403565 | - | 1032 | WP_009946487.1 | cyclic nucleotide-binding domain-containing protein | - |
| DP46_RS12135 () | 2403562..2403819 | - | 258 | WP_076839927.1 | hypothetical protein | - |
| DP46_RS12140 () | 2403904..2404836 | + | 933 | WP_004538052.1 | HTH-type transcriptional activator RhaR | VF |
| DP46_RS12145 () | 2404895..2405797 | - | 903 | WP_004547126.1 | helix-turn-helix transcriptional regulator | - |
| DP46_RS12150 () | 2405794..2406150 | - | 357 | WP_004547105.1 | hypothetical protein | - |
| DP46_RS12155 () | 2406147..2407349 | - | 1203 | WP_004553191.1 | MFS transporter | - |
| DP46_RS12160 () | 2407346..2407648 | - | 303 | WP_004547132.1 | hypothetical protein | - |
| DP46_RS12165 () | 2407755..2408666 | + | 912 | WP_004529948.1 | HTH-type transcriptional regulator ArgP | VF |
| DP46_RS12170 () | 2408941..2409627 | - | 687 | WP_004551352.1 | hydrolase | - |
| DP46_RS12175 () | 2410159..2410473 | + | 315 | WP_004530757.1 | XapX domain-containing protein | - |
| DP46_RS12180 () | 2410466..2412364 | + | 1899 | WP_004538051.1 | amidohydrolase | - |
| DP46_RS12185 () | 2412548..2413783 | + | 1236 | WP_076910173.1 | hypothetical protein | - |
| DP46_RS12190 () | 2414119..2415468 | + | 1350 | WP_076859713.1 | alginate export family protein | - |
| DP46_RS12195 () | 2415542..2415960 | - | 419 | Protein_2429 | hypothetical protein | - |
| DP46_RS12200 () | 2416048..2416869 | + | 822 | WP_004525468.1 | alpha/beta hydrolase | - |
| DP46_RS12205 () | 2416823..2417441 | + | 619 | Protein_2431 | LysR family transcriptional regulator | - |
| DP46_RS12210 () | 2417748..2418377 | + | 630 | WP_004529957.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|