MGE detailed information
MGE type: Prophage MGE length: 48166 bp
Accession: NZ_CP008742 Location: 4611732..4659897 Organism: Pseudomonas savastanoi pv. savastanoi NCPPB 3335 Replicon: chromosome
Accession: NZ_CP008742 Location: 4611732..4659897 Organism: Pseudomonas savastanoi pv. savastanoi NCPPB 3335 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PSA3335_RS21950 () | 4607705..4609348 | - | 1644 | WP_002552601.1 | phosphoethanolamine--lipid A transferase | - |
| PSA3335_RS21955 () | 4609596..4611278 | - | 1683 | WP_082301342.1 | NAD-dependent malic enzyme | - |
| PSA3335_RS21960 () | 4611732..4613246 | + | 1515 | WP_054082386.1 | IS21 family transposase ISPsy14 | Transposase |
| PSA3335_RS21965 () | 4613267..4614022 | + | 756 | WP_002552598.1 | IS21 family transposase ISPsy40 | Transposase |
| PSA3335_RS29440 () | 4614126..4614443 | - | 318 | Protein_4115 | transposase zinc-binding domain-containing protein | - |
| PSA3335_RS21975 () | 4614839..4616320 | + | 1482 | WP_002556030.1 | hypothetical protein | - |
| PSA3335_RS21980 () | 4616620..4616901 | - | 282 | WP_002556029.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PSA3335_RS21985 () | 4616901..4617089 | - | 189 | WP_002556028.1 | hypothetical protein | Antitoxin Detail |
| PSA3335_RS21990 () | 4617266..4617857 | - | 592 | Protein_4119 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| PSA3335_RS21995 () | 4617898..4618317 | - | 420 | WP_082301344.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| PSA3335_RS22000 () | 4618314..4618571 | - | 258 | WP_003381346.1 | Arc family DNA-binding protein | Antitoxin Detail |
| PSA3335_RS22010 () | 4619102..4620601 | + | 1500 | WP_122302115.1 | IS21 family transposase ISPsy20 | Transposase |
| PSA3335_RS22015 () | 4620594..4621397 | + | 804 | WP_031598096.1 | IS21 family transposase ISPsy20 | Transposase |
| PSA3335_RS22020 () | 4621553..4621681 | - | 129 | Protein_4124 | IS3 family transposase ISPsy29 | Transposase |
| PSA3335_RS29445 () | 4621740..4623281 | - | 1542 | Protein_4125 | effector protein | - |
| PSA3335_RS22040 () | 4623733..4624767 | - | 1035 | WP_015060660.1 | IS110 family transposase ISPsy16 | Transposase |
| PSA3335_RS22045 () | 4624875..4625708 | - | 834 | Protein_4127 | IS3-like element IS51 family transposase | - |
| PSA3335_RS29830 () | 4625760..4626842 | - | 1083 | Protein_4128 | silent information regulator protein Sir2 | - |
| PSA3335_RS22055 () | 4627079..4628851 | + | 1773 | WP_031597946.1 | Amidophosphoribosyltransferase | VF |
| PSA3335_RS22060 () | 4628855..4630603 | + | 1749 | WP_002552560.1 | N-acetylglutaminylglutamine synthetase | - |
| PSA3335_RS22065 () | 4630685..4631881 | + | 1197 | WP_002552559.1 | osmoprotectant NAGGN system M42 family peptidase | - |
| PSA3335_RS22070 () | 4631949..4632176 | + | 228 | WP_002552558.1 | YheU family protein | - |
| PSA3335_RS22075 () | 4632224..4632418 | - | 195 | WP_002552557.1 | carbon storage regulator CsrA | - |
| PSA3335_RS22080 () | 4632588..4632928 | - | 341 | Protein_4134 | YnfA family protein | - |
| PSA3335_RS22090 () | 4633021..4633776 | - | 756 | WP_002552598.1 | IS21 family transposase ISPsy40 | Transposase |
| PSA3335_RS22095 () | 4633797..4635311 | - | 1515 | WP_082301208.1 | IS21 family transposase ISPsy14 | Transposase |
| PSA3335_RS22100 () | 4635855..4636670 | - | 816 | WP_002552556.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| PSA3335_RS22105 () | 4636774..4637151 | - | 378 | WP_002552555.1 | DUF2784 domain-containing protein | - |
| PSA3335_RS22110 () | 4637466..4637624 | + | 159 | WP_002552554.1 | DUF3309 domain-containing protein | - |
| PSA3335_RS22115 () | 4637730..4639388 | - | 1659 | WP_031597943.1 | cation acetate symporter | - |
| PSA3335_RS22120 () | 4639385..4639696 | - | 312 | WP_002552552.1 | DUF485 domain-containing protein | - |
| PSA3335_RS22125 () | 4639933..4640787 | - | 855 | WP_002552551.1 | glycine betaine ABC transporter substrate-binding protein | - |
| PSA3335_RS22130 () | 4641834..4643056 | + | 1223 | WP_095178853.1 | IS3 family transposase IS51 | Transposase |
| PSA3335_RS22135 () | 4643380..4644675 | + | 1296 | WP_002552550.1 | hypothetical protein | - |
| PSA3335_RS22140 () | 4644668..4645480 | + | 813 | WP_002552549.1 | VacJ family lipoprotein | - |
| PSA3335_RS22145 () | 4645607..4646197 | + | 591 | WP_002552548.1 | polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) | - |
| PSA3335_RS22150 () | 4646230..4647138 | - | 909 | WP_002552547.1 | HTH-type transcriptional regulator ArgP | VF |
| PSA3335_RS22155 () | 4647248..4648450 | + | 1203 | WP_002552546.1 | MFS transporter | - |
| PSA3335_RS22160 () | 4648752..4649828 | + | 1077 | WP_002552545.1 | diguanylate cyclase | - |
| PSA3335_RS22165 () | 4649833..4650713 | - | 881 | Protein_4150 | hypothetical protein | - |
| PSA3335_RS22170 () | 4650946..4651665 | - | 720 | WP_002552542.1 | hypothetical protein | - |
| PSA3335_RS22175 () | 4651849..4652118 | - | 270 | WP_004657623.1 | hypothetical protein | VF |
| PSA3335_RS22180 () | 4652592..4653908 | - | 1317 | WP_002552541.1 | MFS transporter | - |
| PSA3335_RS22185 () | 4654178..4656352 | - | 2175 | WP_002552540.1 | TonB-dependent siderophore receptor | - |
| PSA3335_RS22190 () | 4656653..4656961 | + | 309 | WP_002552539.1 | PepSY domain-containing protein | - |
| PSA3335_RS22195 () | 4657054..4658217 | - | 1164 | WP_002552538.1 | PQQ-dependent sugar dehydrogenase | - |
| PSA3335_RS22200 () | 4658280..4658600 | - | 321 | WP_002552537.1 | hypothetical protein | - |
| PSA3335_RS22210 () | 4659960..4660742 | - | 783 | Protein_4159 | GAF domain-containing protein | - |
| PSA3335_RS22215 () | 4660902..4662077 | - | 1176 | WP_002554391.1 | PAS domain-containing sensor histidine kinase | - |
| PSA3335_RS22220 () | 4662067..4662888 | - | 822 | WP_002554392.1 | alpha/beta hydrolase | - |
| PSA3335_RS22225 () | 4663227..4663664 | - | 438 | WP_002554393.1 | nucleoside deaminase | - |
| PSA3335_RS22230 () | 4663693..4664193 | - | 501 | WP_002554394.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|