MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 73470 bp
Accession: NZ_CP008697 Location: 4051873..4125342 Organism: Escherichia coli strain ST648 isolate Pleural Effusion of Patients with Empyema Thoracis Replicon: chromosome
Accession: NZ_CP008697 Location: 4051873..4125342 Organism: Escherichia coli strain ST648 isolate Pleural Effusion of Patients with Empyema Thoracis Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FH07_RS19955 () | 4047175..4048431 | + | 1257 | WP_001049791.1 | nucleoside permease NupG | - |
| FH07_RS19960 () | 4048480..4050615 | - | 2136 | WP_001564026.1 | ornithine decarboxylase | - |
| FH07_RS28995 () | 4050777..4050854 | - | 78 | WP_212734103.1 | hypothetical protein | - |
| FH07_RS19965 () | 4051007..4051714 | + | 708 | WP_060684483.1 | DUF554 domain-containing protein | - |
| FH07_RS19975 () | 4052093..4053358 | + | 1266 | WP_001218869.1 | Prophage integrase IntS ; Integrase | Integrase |
| FH07_RS19980 () | 4053614..4054657 | + | 1044 | WP_000147018.1 | hypothetical protein | - |
| FH07_RS19985 () | 4055187..4055884 | + | 698 | Protein_3821 | IS1 family transposase IS1R | Transposase |
| FH07_RS28585 () | 4055901..4056692 | + | 792 | Protein_3822 | IS3 family transposase | - |
| FH07_RS19995 () | 4056859..4057409 | + | 551 | Protein_3823 | Transcriptional repressor MprA | VF |
| FH07_RS20005 () | 4057876..4058573 | - | 698 | Protein_3824 | IS1 family transposase IS1X2 | Transposase |
| FH07_RS20010 () | 4058716..4060215 | - | 1500 | WP_001331567.1 | basic amino acid/polyamine antiporter | - |
| FH07_RS20015 () | 4060290..4062659 | - | 2370 | WP_000671170.1 | arginine decarboxylase | - |
| FH07_RS20020 () | 4062764..4064233 | - | 1470 | WP_001331566.1 | basic amino acid/polyamine antiporter | - |
| FH07_RS27980 () | 4064486..4065179 | + | 694 | Protein_3828 | IS1 family transposase IS1N | Transposase |
| FH07_RS20040 () | 4065798..4066145 | + | 348 | WP_001564031.1 | alcohol dehydrogenase catalytic domain-containing protein | - |
| FH07_RS20045 () | 4066215..4066472 | + | 258 | Protein_3830 | IS3 family transposase IS911 | Transposase |
| FH07_RS20050 () | 4066670..4067143 | - | 474 | Protein_3831 | IS3 family transposase IS629 | Transposase |
| FH07_RS20055 () | 4067233..4068741 | - | 1509 | WP_060684526.1 | group II intron reverse transcriptase/maturase | - |
| FH07_RS20070 () | 4069414..4069803 | - | 390 | Protein_3833 | IS3 family transposase | - |
| FH07_RS20075 () | 4069798..4070589 | + | 792 | Protein_3834 | ATP-dependent helicase | - |
| FH07_RS20080 () | 4070637..4070960 | - | 324 | WP_001564033.1 | hypothetical protein | - |
| FH07_RS20085 () | 4071025..4071669 | - | 645 | WP_001564034.1 | hypothetical protein | - |
| FH07_RS20090 () | 4071690..4071959 | - | 270 | WP_000226517.1 | PerC family transcriptional regulator | - |
| FH07_RS20095 () | 4072038..4072676 | - | 639 | WP_001564035.1 | ParB N-terminal domain-containing protein | - |
| FH07_RS20100 () | 4072661..4073893 | - | 1233 | WP_001564037.1 | phosphoadenosine phosphosulfate reductase | - |
| FH07_RS20105 () | 4074034..4074678 | - | 645 | WP_024196335.1 | hypothetical protein | - |
| FH07_RS26990 () | 4074795..4075661 | - | 867 | Protein_3841 | ImpA domain protein | - |
| FH07_RS26995 () | 4075702..4076142 | - | 441 | WP_001403216.1 | hypothetical protein | VF |
| FH07_RS20120 () | 4076536..4078281 | - | 1746 | WP_001564039.1 | AAA family ATPase | - |
| FH07_RS27000 () | 4078424..4078684 | - | 261 | Protein_3844 | IS3 family transposase ISLad1 | Transposase |
| FH07_RS20125 () | 4079405..4079596 | + | 192 | WP_001287883.1 | DUF4222 domain-containing protein | - |
| FH07_RS20130 () | 4079649..4079882 | - | 234 | WP_000124185.1 | hypothetical protein | - |
| FH07_RS20135 () | 4079978..4080478 | - | 501 | Protein_3847 | DNA-binding protein | - |
| FH07_RS20140 () | 4080835..4081953 | + | 1119 | WP_000135343.1 | NAD-dependent methanol dehydrogenase | VF |
| FH07_RS20145 () | 4082093..4082779 | + | 687 | WP_001109982.1 | propanediol utilization system phosphotransacylase GrpB | - |
| FH07_RS20150 () | 4082834..4083593 | + | 760 | Protein_3850 | propanediol utilization system chaperone GrpC | - |
| FH07_RS20155 () | 4083577..4084302 | + | 726 | WP_001329683.1 | propanediol utilization system flavoprotein GrpD | - |
| FH07_RS20160 () | 4084314..4084583 | + | 270 | WP_001564041.1 | propanediol utilization microcompartment vertex protein GrpE | - |
| FH07_RS20165 () | 4084611..4085108 | + | 498 | WP_001564042.1 | propanediol utilization system heme-binding protein GrpF | - |
| FH07_RS20170 () | 4085137..4086333 | + | 1197 | WP_001362987.1 | propanediol utilization system propionate kinase GrpG | - |
| FH07_RS20175 () | 4086618..4086899 | + | 282 | WP_001301171.1 | propanediol utilization system shell hexameric protein GrpH | - |
| FH07_RS20180 () | 4086921..4087706 | + | 786 | WP_001205499.1 | propanediol utilization microcompartment protein GrpI | - |
| FH07_RS20185 () | 4087767..4089284 | + | 1518 | WP_000997839.1 | Aldehyde-alcohol dehydrogenase | VF |
| FH07_RS20190 () | 4089308..4089607 | + | 300 | WP_000746009.1 | propanediol utilization system shell hexameric protein GrpK | - |
| FH07_RS20195 () | 4089618..4090193 | + | 576 | WP_000722279.1 | propanediol utilization system protease GrpL | - |
| FH07_RS20200 () | 4090242..4092794 | + | 2553 | WP_000890295.1 | glycyl radical diol dehydratase GrpM | - |
| FH07_RS20205 () | 4092903..4093820 | + | 918 | WP_001564043.1 | glycyl radical diol dehydratase-activating enzyme GrpN | - |
| FH07_RS20210 () | 4093957..4094871 | + | 915 | WP_060684484.1 | propanediol utilization system permease GrpO | - |
| FH07_RS20215 () | 4095483..4095852 | + | 370 | Protein_3863 | reverse transcriptase/maturase | - |
| FH07_RS20220 () | 4095852..4096445 | + | 594 | Protein_3864 | maturase | - |
| FH07_RS20225 () | 4097061..4098323 | + | 1263 | WP_213044856.1 | PocR ligand-binding domain-containing protein | - |
| FH07_RS20230 () | 4098340..4099395 | + | 1056 | WP_001564046.1 | HTH-type transcriptional activator Btr | VF |
| FH07_RS20235 () | 4099524..4100675 | + | 1152 | WP_001001003.1 | propanediol utilization system methionine adenosyltransferase GrpR | - |
| FH07_RS20240 () | 4100720..4101265 | + | 546 | WP_001564047.1 | propanediol utilization system shell hexameric protein GrpS | - |
| FH07_RS27010 () | 4101622..4101915 | - | 294 | Protein_3869 | helix-turn-helix domain-containing protein | - |
| FH07_RS28000 () | 4101938..4102589 | - | 652 | Protein_3870 | TetR/AcrR family transcriptional regulator | - |
| FH07_RS20255 () | 4102710..4103867 | - | 1158 | Protein_3871 | Multidrug resistance protein MexB | VF |
| FH07_RS25785 () | 4103958..4104219 | + | 262 | Protein_3872 | IS3 family transposase IS2 | Transposase |
| FH07_RS28005 () | 4104287..4104512 | - | 226 | Protein_3873 | hypothetical protein | - |
| FH07_RS20265 () | 4104524..4104757 | - | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| FH07_RS20270 () | 4104826..4105401 | - | 576 | WP_001564054.1 | hypothetical protein | - |
| FH07_RS20275 () | 4105659..4106225 | - | 567 | WP_001126810.1 | inovirus-type Gp2 protein | - |
| FH07_RS20280 () | 4107526..4108620 | + | 1095 | WP_000370278.1 | sugar kinase | - |
| FH07_RS20285 () | 4108639..4109894 | - | 1256 | Protein_3878 | NupC/NupG family nucleoside CNT transporter | - |
| FH07_RS20290 () | 4109978..4110913 | - | 936 | WP_001290195.1 | pseudouridine-5'-phosphate glycosidase | - |
| FH07_RS20295 () | 4110906..4111841 | - | 936 | WP_000332862.1 | pseudouridine kinase | - |
| FH07_RS20300 () | 4112377..4112829 | - | 453 | WP_000558152.1 | N-acetyltransferase | - |
| FH07_RS20310 () | 4113350..4114081 | - | 732 | WP_001075495.1 | inovirus Gp2 family protein | - |
| FH07_RS20315 () | 4114751..4115281 | + | 531 | WP_000778605.1 | hypothetical protein | - |
| FH07_RS20325 () | 4116444..4117668 | - | 1225 | Protein_3884 | hypothetical protein | - |
| FH07_RS20330 () | 4117769..4118653 | + | 885 | WP_001564055.1 | 50S ribosome-binding GTPase | - |
| FH07_RS20340 () | 4118856..4119536 | + | 681 | WP_032333197.1 | WYL domain-containing protein | - |
| FH07_RS20345 () | 4119684..4120361 | + | 678 | WP_060684486.1 | hypothetical protein | - |
| FH07_RS20350 () | 4120367..4120600 | + | 234 | WP_001278283.1 | DUF905 family protein | - |
| FH07_RS20355 () | 4120690..4121508 | + | 819 | WP_001773857.1 | DUF945 domain-containing protein | - |
| FH07_RS20360 () | 4121599..4122084 | + | 486 | WP_000214398.1 | antirestriction protein | - |
| FH07_RS20365 () | 4122100..4122576 | + | 477 | WP_001186786.1 | RadC family protein | - |
| FH07_RS20370 () | 4122639..4122860 | + | 222 | WP_000692311.1 | DUF987 domain-containing protein | - |
| FH07_RS20380 () | 4123023..4123391 | + | 369 | WP_001540478.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| FH07_RS20385 () | 4123481..4123855 | + | 375 | WP_032333762.1 | TA system toxin CbtA family protein | Toxin Detail |
| FH07_RS20390 () | 4123852..4124340 | + | 489 | WP_000777545.1 | hypothetical protein | - |
| FH07_RS20395 () | 4124352..4124549 | + | 198 | WP_000839281.1 | DUF957 domain-containing protein | - |
| FH07_RS20400 () | 4124646..4125215 | + | 570 | WP_001560692.1 | DUF4942 domain-containing protein | - |
| FH07_RS28880 () | 4125573..4125728 | + | 156 | WP_000729638.1 | hypothetical protein | - |
| FH07_RS20410 () | 4126539..4127522 | + | 984 | WP_024946586.1 | KpsF/GutQ family sugar-phosphate isomerase | - |
| FH07_RS20415 () | 4127594..4128742 | + | 1149 | WP_000905920.1 | capsule polysaccharide export inner-membrane protein KpsE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|