MGE detailed information
MGE type: Conjugative plasmid MGE length: 167267 bp
Accession: NZ_CP007636 Location: 1..167267 Organism: Vibrio cholerae strain 2012EL-2176 Replicon: plasmid unnamed
Accession: NZ_CP007636 Location: 1..167267 Organism: Vibrio cholerae strain 2012EL-2176 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EN18_RS19090 () | 23..892 | + | 870 | WP_000997323.1 | 3'-5' exonuclease | - |
| EN18_RS19095 () | 889..1380 | + | 492 | WP_000139717.1 | hypothetical protein | - |
| EN18_RS19100 () | 1717..2592 | + | 876 | WP_001097010.1 | DNA replication terminus site-binding protein | - |
| EN18_RS19105 () | 2746..3786 | + | 1041 | WP_000101568.1 | DNA-binding protein | - |
| EN18_RS19115 () | 4073..5584 | + | 1512 | WP_000811656.1 | ATP-dependent helicase | - |
| EN18_RS19120 () | 5695..6735 | + | 1041 | WP_001326396.1 | conjugal transfer protein TraF | - |
| EN18_RS19125 () | 6737..8170 | + | 1434 | WP_000256129.1 | conjugal transfer protein TraH | - |
| EN18_RS19130 () | 8183..11797 | + | 3615 | WP_040118556.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| EN18_RS19135 () | 11835..12197 | - | 363 | WP_000683483.1 | hypothetical protein | - |
| EN18_RS19140 () | 12913..13185 | + | 273 | WP_000356489.1 | helix-turn-helix domain-containing protein | - |
| EN18_RS19145 () | 13185..13718 | + | 534 | WP_000790610.1 | transglycosylase SLT domain-containing protein | - |
| EN18_RS19150 () | 13729..14337 | + | 609 | WP_000891157.1 | hypothetical protein | - |
| EN18_RS19155 () | 14334..14885 | + | 552 | WP_001020646.1 | hypothetical protein | - |
| EN18_RS19160 () | 14945..15364 | - | 420 | WP_000651490.1 | H-NS histone family protein | - |
| EN18_RS19165 () | 15366..15659 | - | 294 | WP_000919078.1 | hypothetical protein | - |
| EN18_RS19170 () | 15676..16659 | - | 984 | WP_000077458.1 | ParM/StbA family protein | - |
| EN18_RS19175 () | 17158..17697 | + | 540 | WP_001447712.1 | hypothetical protein | - |
| EN18_RS19180 () | 17702..17989 | + | 288 | WP_000127321.1 | hypothetical protein | - |
| EN18_RS19185 () | 17974..19074 | + | 1101 | WP_000350011.1 | plasmid replication protein | - |
| EN18_RS19195 () | 20111..20545 | - | 435 | WP_000883925.1 | hypothetical protein | - |
| EN18_RS19200 () | 20563..21678 | - | 1116 | WP_000946102.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| EN18_RS19205 () | 21947..22555 | + | 609 | WP_000849071.1 | hypothetical protein | - |
| EN18_RS19210 () | 22560..23081 | + | 522 | WP_000393785.1 | hypothetical protein | - |
| EN18_RS19215 () | 23084..23605 | + | 522 | WP_000805800.1 | hypothetical protein | - |
| EN18_RS19220 () | 23702..24175 | + | 474 | WP_000057877.1 | hypothetical protein | - |
| EN18_RS19225 () | 24186..24479 | + | 294 | WP_001370730.1 | hypothetical protein | - |
| EN18_RS19230 () | 24484..25338 | + | 855 | WP_000539392.1 | hypothetical protein | - |
| EN18_RS19235 () | 25338..26297 | + | 960 | WP_000829616.1 | S49 family peptidase | - |
| EN18_RS19240 () | 26313..27173 | + | 861 | WP_000139698.1 | DsbA family protein | - |
| EN18_RS19245 () | 27207..27635 | + | 429 | WP_000591074.1 | hypothetical protein | - |
| EN18_RS19250 () | 27692..28051 | + | 360 | WP_000422768.1 | hypothetical protein | - |
| EN18_RS19255 () | 28051..28497 | + | 447 | WP_000919345.1 | Fe3+-siderophore ABC transporter permease | - |
| EN18_RS19260 () | 28494..29012 | + | 519 | WP_000210756.1 | nitrite reductase | - |
| EN18_RS19265 () | 29012..29242 | + | 231 | WP_000972663.1 | hypothetical protein | - |
| EN18_RS19270 () | 29229..30086 | + | 858 | WP_001167032.1 | hypothetical protein | - |
| EN18_RS19280 () | 30317..30844 | + | 528 | WP_001236377.1 | thermonuclease family protein | - |
| EN18_RS19285 () | 30902..31174 | + | 273 | WP_001043047.1 | HU family DNA-binding protein | - |
| EN18_RS19290 () | 31262..31555 | + | 294 | WP_001239997.1 | chromosome segregation protein ParM | - |
| EN18_RS19295 () | 31582..31884 | - | 303 | WP_000124640.1 | XRE family transcriptional regulator | Antitoxin Detail |
| EN18_RS19300 () | 31889..32239 | - | 351 | WP_000270043.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| EN18_RS19305 () | 32402..32950 | + | 549 | WP_001061574.1 | transcriptional regulator | - |
| EN18_RS19315 () | 33291..33485 | + | 195 | WP_000343597.1 | hypothetical protein | - |
| EN18_RS19320 () | 33496..33867 | + | 372 | WP_000516916.1 | hypothetical protein | - |
| EN18_RS19325 () | 33860..34330 | + | 471 | WP_001281821.1 | hypothetical protein | - |
| EN18_RS19330 () | 34345..34680 | - | 336 | WP_000683476.1 | hypothetical protein | - |
| EN18_RS19335 () | 34777..35265 | + | 489 | WP_001273096.1 | DUF1643 domain-containing protein | - |
| EN18_RS19340 () | 35268..35765 | + | 498 | WP_000062185.1 | hypothetical protein | - |
| EN18_RS19345 () | 35980..36684 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| EN18_RS19350 () | 36747..37202 | + | 456 | Protein_49 | Tn3 family transposase TnpR_Tn3 | Transposase |
| EN18_RS19355 () | 37385..38245 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| EN18_RS19360 () | 38427..39245 | + | 819 | WP_033107705.1 | SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| EN18_RS19365 () | 39292..39996 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| EN18_RS21425 () | 40002..40142 | + | 141 | WP_001044210.1 | hypothetical protein | - |
| EN18_RS19375 () | 40628..41365 | + | 738 | WP_001366550.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| EN18_RS19380 () | 41362..41586 | + | 225 | WP_000743213.1 | hypothetical protein | - |
| EN18_RS19385 () | 41797..43290 | + | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| EN18_RS21595 () | 43759..44205 | + | 447 | Protein_57 | DUF3363 domain-containing protein | - |
| EN18_RS19395 () | 44422..45636 | + | 1215 | WP_000214119.1 | Bicyclomycin resistance protein | ARG |
| EN18_RS19400 () | 45664..45969 | + | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| EN18_RS21280 () | 46081..46269 | + | 189 | Protein_60 | IS91 family transposase | - |
| EN18_RS19405 () | 46236..47435 | - | 1200 | WP_000804063.1 | Tetracycline resistance protein, class C | ARG |
| EN18_RS19410 () | 47541..48191 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| EN18_RS19415 () | 48223..48465 | - | 243 | WP_000844627.1 | transposase | - |
| EN18_RS19420 () | 48771..49607 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| EN18_RS19425 () | 49607..50410 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| EN18_RS19430 () | 50471..51286 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| EN18_RS19435 () | 51593..51904 | + | 312 | WP_000338945.1 | hypothetical protein | - |
| EN18_RS19440 () | 52078..52863 | + | 786 | WP_001151304.1 | Sporulation initiation inhibitor protein Soj | VF |
| EN18_RS19445 () | 52867..54048 | + | 1182 | WP_001207227.1 | ParB/RepB/Spo0J family partition protein | - |
| EN18_RS19450 () | 54097..54369 | + | 273 | WP_000703827.1 | helix-turn-helix domain-containing protein | - |
| EN18_RS19455 () | 54422..55057 | - | 636 | WP_000074431.1 | N-6 DNA methylase | - |
| EN18_RS21435 () | 55149..55292 | - | 144 | WP_000939033.1 | hypothetical protein | - |
| EN18_RS19460 () | 55619..55996 | + | 378 | WP_001125904.1 | hypothetical protein | - |
| EN18_RS21600 () | 55989..56270 | + | 282 | WP_000044823.1 | hypothetical protein | - |
| EN18_RS19470 () | 56245..56919 | + | 675 | WP_000344149.1 | hypothetical protein | - |
| EN18_RS19475 () | 56987..57418 | + | 432 | WP_001326170.1 | hypothetical protein | - |
| EN18_RS19480 () | 57424..57735 | + | 312 | WP_001447539.1 | hypothetical protein | - |
| EN18_RS19485 () | 57744..58244 | + | 501 | WP_000647188.1 | hypothetical protein | - |
| EN18_RS19490 () | 58248..59675 | + | 1428 | WP_000936897.1 | DNA cytosine methyltransferase | - |
| EN18_RS19495 () | 59675..60331 | + | 657 | WP_000268552.1 | hypothetical protein | - |
| EN18_RS19500 () | 60387..61004 | + | 618 | WP_000464630.1 | hypothetical protein | - |
| EN18_RS19510 () | 61216..61515 | + | 300 | WP_001326171.1 | hypothetical protein | - |
| EN18_RS19515 () | 61606..62094 | - | 489 | WP_000467110.1 | hypothetical protein | - |
| EN18_RS19520 () | 62109..64301 | - | 2193 | WP_000366823.1 | DNA topoisomerase 3 | - |
| EN18_RS19525 () | 64301..64534 | - | 234 | WP_001191890.1 | hypothetical protein | - |
| EN18_RS19530 () | 64516..65133 | - | 618 | WP_001249395.1 | hypothetical protein | - |
| EN18_RS19535 () | 65301..68273 | + | 2973 | WP_001326173.1 | hypothetical protein | Relaxase |
| EN18_RS19540 () | 68270..70135 | + | 1866 | WP_000178857.1 | conjugative transfer system coupling protein TraD | - |
| EN18_RS19545 () | 70146..70730 | + | 585 | WP_000332868.1 | hypothetical protein | - |
| EN18_RS19550 () | 70687..71316 | + | 630 | WP_000743449.1 | DUF4400 domain-containing protein | - |
| EN18_RS19555 () | 71326..71772 | + | 447 | WP_000122507.1 | hypothetical protein | - |
| EN18_RS19560 () | 71782..72159 | + | 378 | WP_000869297.1 | hypothetical protein | - |
| EN18_RS19565 () | 72159..72821 | + | 663 | WP_001231464.1 | hypothetical protein | - |
| EN18_RS21605 () | 73002..73145 | + | 144 | WP_001275801.1 | hypothetical protein | - |
| EN18_RS19570 () | 73145..73522 | + | 378 | WP_001326174.1 | hypothetical protein | - |
| EN18_RS19575 () | 73667..73948 | + | 282 | WP_000805625.1 | type IV conjugative transfer system protein TraL | - |
| EN18_RS19580 () | 73945..74571 | + | 627 | WP_001049717.1 | hypothetical protein | - |
| EN18_RS19585 () | 74555..75472 | + | 918 | WP_000794249.1 | type-F conjugative transfer system secretin TraK | - |
| EN18_RS19590 () | 75472..76785 | + | 1314 | WP_024131605.1 | conjugal transfer protein TraB | - |
| EN18_RS19595 () | 76782..77360 | + | 579 | WP_000793435.1 | type IV conjugative transfer system lipoprotein TraV | - |
| EN18_RS19600 () | 77364..77756 | + | 393 | WP_000479535.1 | hypothetical protein | - |
| EN18_RS19605 () | 78041..79303 | + | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| EN18_RS19610 () | 79627..80772 | + | 1146 | WP_000976514.1 | Beta-lactamase | ARG |
| EN18_RS19615 () | 80866..81399 | + | 534 | WP_001221666.1 | lipocalin family protein | - |
| EN18_RS19620 () | 81396..81713 | - | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| EN18_RS19625 () | 82441..87927 | + | 5487 | WP_000606835.1 | DUF4165 domain-containing protein | - |
| EN18_RS19630 () | 88076..88783 | + | 708 | WP_001259346.1 | DsbC family protein | - |
| EN18_RS19635 () | 88780..91227 | + | 2448 | WP_000637384.1 | type IV secretion system protein TraC | - |
| EN18_RS19640 () | 91242..91559 | + | 318 | WP_000351984.1 | hypothetical protein | - |
| EN18_RS19645 () | 91556..92086 | + | 531 | WP_001010740.1 | S26 family signal peptidase | - |
| EN18_RS19650 () | 92049..93314 | + | 1266 | WP_001447719.1 | conjugal transfer protein TraW | - |
| EN18_RS19655 () | 93311..93982 | + | 672 | WP_000575345.1 | EAL domain-containing protein | - |
| EN18_RS19660 () | 93979..94986 | + | 1008 | WP_000983282.1 | TraU family protein | - |
| EN18_RS19665 () | 95090..97897 | + | 2808 | WP_001447718.1 | conjugal transfer mating pair stabilization protein TraN | - |
| EN18_RS19670 () | 97936..98796 | - | 861 | WP_000709517.1 | hypothetical protein | - |
| EN18_RS19675 () | 98919..99560 | - | 642 | WP_000796664.1 | hypothetical protein | - |
| EN18_RS19680 () | 99855..100175 | + | 321 | WP_000547566.1 | hypothetical protein | - |
| EN18_RS19685 () | 100479..100664 | + | 186 | WP_001186917.1 | hypothetical protein | - |
| EN18_RS19690 () | 100884..101852 | + | 969 | WP_000085160.1 | CbbQ/NirQ/NorQ C-terminal domain-containing protein | - |
| EN18_RS19695 () | 101863..102771 | + | 909 | WP_000739139.1 | hypothetical protein | - |
| EN18_RS19700 () | 102832..103362 | + | 531 | WP_000987165.1 | single-stranded DNA-binding protein | - |
| EN18_RS19705 () | 103457..104446 | + | 990 | WP_001282585.1 | phage recombination protein Bet | - |
| EN18_RS19710 () | 104509..105519 | + | 1011 | WP_000706865.1 | YqaJ viral recombinase family protein | - |
| EN18_RS19715 () | 105719..106996 | + | 1278 | WP_000170087.1 | DUF3150 domain-containing protein | - |
| EN18_RS19720 () | 107081..108877 | + | 1797 | WP_000039319.1 | VWA domain-containing protein | - |
| EN18_RS19725 () | 108939..109274 | + | 336 | WP_001447572.1 | hypothetical protein | - |
| EN18_RS19730 () | 109539..110078 | + | 540 | WP_000018872.1 | hypothetical protein | - |
| EN18_RS19735 () | 110169..110669 | + | 501 | WP_000793769.1 | hypothetical protein | - |
| EN18_RS19740 () | 110743..111627 | + | 885 | WP_000477209.1 | hypothetical protein | - |
| EN18_RS19745 () | 111693..111917 | + | 225 | WP_040118557.1 | 2Fe-2S ferredoxin-like protein | - |
| EN18_RS19750 () | 111979..112368 | + | 390 | WP_000026577.1 | hypothetical protein | - |
| EN18_RS19755 () | 112358..112810 | + | 453 | WP_001176699.1 | hypothetical protein | - |
| EN18_RS20900 () | 112791..113090 | + | 300 | WP_000164429.1 | hypothetical protein | - |
| EN18_RS19765 () | 113148..113339 | + | 192 | WP_000651508.1 | hypothetical protein | - |
| EN18_RS19770 () | 113384..113761 | + | 378 | WP_001337696.1 | hypothetical protein | - |
| EN18_RS19775 () | 113953..114297 | + | 345 | WP_000209093.1 | hypothetical protein | - |
| EN18_RS19780 () | 114375..114677 | + | 303 | WP_000410925.1 | hypothetical protein | - |
| EN18_RS19785 () | 114755..116380 | + | 1626 | WP_000201432.1 | DNA cytosine methyltransferase | - |
| EN18_RS19790 () | 116441..116872 | + | 432 | WP_000687894.1 | hypothetical protein | - |
| EN18_RS19795 () | 116946..117500 | + | 555 | WP_001093867.1 | hypothetical protein | - |
| EN18_RS19800 () | 117733..118119 | + | 387 | WP_000042274.1 | hypothetical protein | - |
| EN18_RS19805 () | 118207..120660 | + | 2454 | WP_001187969.1 | phosphoadenosine phosphosulfate reductase | - |
| EN18_RS19810 () | 120862..121065 | + | 204 | WP_000050847.1 | hypothetical protein | - |
| EN18_RS19815 () | 121137..121742 | + | 606 | WP_000071870.1 | 5'-deoxynucleotidase | - |
| EN18_RS19820 () | 121735..122004 | + | 270 | WP_000184110.1 | hypothetical protein | - |
| EN18_RS19825 () | 122018..122236 | + | 219 | WP_000260293.1 | hypothetical protein | - |
| EN18_RS19830 () | 122310..122867 | + | 558 | WP_000064432.1 | hypothetical protein | - |
| EN18_RS19835 () | 122942..123793 | + | 852 | WP_000595210.1 | hypothetical protein | - |
| EN18_RS21450 () | 123999..124145 | + | 147 | WP_001032043.1 | hypothetical protein | - |
| EN18_RS19840 () | 124252..124638 | + | 387 | WP_001077336.1 | hypothetical protein | - |
| EN18_RS19845 () | 124816..126543 | + | 1728 | WP_000122922.1 | toprim domain-containing protein | - |
| EN18_RS19850 () | 126530..126808 | + | 279 | WP_000268337.1 | hypothetical protein | - |
| EN18_RS19855 () | 126881..127102 | + | 222 | WP_000714163.1 | hypothetical protein | - |
| EN18_RS19860 () | 127284..128288 | - | 1005 | WP_000427619.1 | IS110 family transposase IS5075 | Transposase |
| EN18_RS19865 () | 128367..131339 | - | 2973 | WP_001138073.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| EN18_RS19870 () | 131342..131899 | - | 558 | WP_001162012.1 | Tn3 family transposase TnpR_TnAs2 | Transposase |
| EN18_RS19875 () | 132196..133209 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| EN18_RS19880 () | 133382..133834 | + | 453 | WP_001749986.1 | hypothetical protein | ARG |
| EN18_RS19885 () | 133967..134440 | + | 474 | WP_001749985.1 | Dihydrofolate reductase type 1 | ARG |
| EN18_RS19890 () | 134621..135448 | + | 828 | WP_080292073.1 | Streptomycin 3''-adenylyltransferase | ARG |
| EN18_RS19895 () | 135508..136857 | - | 1350 | WP_040118558.1 | group II intron reverse transcriptase/maturase | - |
| EN18_RS19900 () | 137530..137877 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| EN18_RS19905 () | 137871..138710 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| EN18_RS19910 () | 139115..140656 | + | 1542 | WP_000050481.1 | IS91 family transposase ISVsa3 | Transposase |
| EN18_RS19915 () | 141155..142030 | + | 876 | WP_025368620.1 | Beta-lactamase Toho-1 | ARG |
| EN18_RS19925 () | 143114..143461 | + | 348 | WP_000679427.1 | quaternary ammonium compound efflux SMR transporter QacE delta 1 | - |
| EN18_RS19930 () | 143455..144294 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| EN18_RS19935 () | 144491..144694 | + | 204 | WP_064765192.1 | hypothetical protein | - |
| EN18_RS19940 () | 144876..145880 | - | 1005 | WP_000427619.1 | IS110 family transposase IS5075 | Transposase |
| EN18_RS19945 () | 146108..147313 | + | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| EN18_RS19950 () | 147324..147629 | + | 306 | WP_000130000.1 | hypothetical protein | Relaxase |
| EN18_RS19955 () | 147856..148620 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| EN18_RS19960 () | 149113..149697 | - | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| EN18_RS19965 () | 149697..150935 | - | 1239 | WP_000004159.1 | MFS transporter | - |
| EN18_RS19970 () | 150932..151837 | - | 906 | WP_000219391.1 | hypothetical protein | ARG |
| EN18_RS19975 () | 151959..152663 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| EN18_RS19980 () | 152723..152968 | - | 246 | Protein_177 | IS6 family transposase IS15 | Transposase |
| EN18_RS19985 () | 152983..154668 | - | 1686 | WP_000149288.1 | mercury(II) reductase | - |
| EN18_RS19990 () | 154740..155015 | - | 276 | WP_000732290.1 | mercury resistance system periplasmic binding protein MerP | - |
| EN18_RS19995 () | 155031..155381 | - | 351 | WP_001294666.1 | mercuric transport protein MerT | - |
| EN18_RS20000 () | 155453..155887 | + | 435 | WP_040118559.1 | IS607 family transposase ISChh1 | Transposase |
| EN18_RS20005 () | 155987..156991 | + | 1005 | WP_000427623.1 | IS110 family transposase IS4321R | Transposase |
| EN18_RS20935 () | 157268..157387 | + | 120 | Protein_183 | permease | - |
| EN18_RS21460 () | 157397..157513 | + | 117 | WP_000338626.1 | hypothetical protein | - |
| EN18_RS20010 () | 157634..158008 | + | 375 | WP_000868820.1 | hypothetical protein | - |
| EN18_RS20015 () | 158122..158847 | + | 726 | WP_000988731.1 | hypothetical protein | - |
| EN18_RS20020 () | 158980..163233 | + | 4254 | WP_001257735.1 | RHS repeat protein | - |
| EN18_RS20025 () | 163205..163645 | + | 441 | WP_001326394.1 | hypothetical protein | - |
| EN18_RS21315 () | 163816..164268 | + | 453 | Protein_189 | hypothetical protein | - |
| EN18_RS20035 () | 164284..164886 | - | 603 | WP_000278322.1 | hypothetical protein | - |
| EN18_RS20040 () | 165156..165437 | + | 282 | WP_000575657.1 | hypothetical protein | - |
| EN18_RS20050 () | 165736..166272 | + | 537 | WP_000949433.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|