MGE detailed information
MGE type: IScluster/Tn MGE length: 15165 bp
Accession: NZ_CP007620 Location: 3945733..3960897 Organism: Pseudomonas putida strain DLL-E4 Replicon: chromosome
Accession: NZ_CP007620 Location: 3945733..3960897 Organism: Pseudomonas putida strain DLL-E4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DW66_RS18115 () | 3942074..3943093 | - | 1020 | WP_038409892.1 | hydroxyquinol 1,2-dioxygenase | - |
| DW66_RS18120 () | 3943145..3943639 | - | 495 | WP_038409893.1 | hypothetical protein | - |
| DW66_RS18125 () | 3943806..3944066 | - | 261 | WP_049870826.1 | hypothetical protein | - |
| DW66_RS18135 () | 3944597..3945118 | + | 522 | WP_049870827.1 | cupin domain-containing protein | - |
| DW66_RS32740 () | 3945198..3945443 | + | 246 | WP_038409896.1 | hypothetical protein | - |
| DW66_RS18145 () | 3945733..3948760 | - | 3028 | Protein_3613 | Tn3 family transposase ISPsy42 | Transposase |
| DW66_RS18150 () | 3948744..3949346 | - | 603 | WP_010465829.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| DW66_RS18155 () | 3949538..3949915 | + | 378 | WP_003151133.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DW66_RS18160 () | 3949896..3950231 | + | 336 | WP_001172026.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| DW66_RS18165 () | 3950246..3950581 | + | 336 | WP_000741275.1 | hypothetical protein | - |
| DW66_RS18170 () | 3950605..3950931 | + | 327 | WP_000091614.1 | hypothetical protein | - |
| DW66_RS18175 () | 3950928..3951299 | + | 372 | WP_023294894.1 | hypothetical protein | - |
| DW66_RS18180 () | 3951339..3952163 | + | 825 | Protein_3620 | MFS transporter | - |
| DW66_RS18185 () | 3952188..3953264 | - | 1077 | WP_038409898.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| DW66_RS18190 () | 3953347..3953736 | - | 390 | WP_038409899.1 | hypothetical protein | - |
| DW66_RS18195 () | 3953733..3956750 | - | 3018 | WP_038409900.1 | Tn3 family transposase TnpA_ISPa42 | Transposase |
| DW66_RS18200 () | 3956902..3957111 | + | 210 | Protein_3624 | OsmC family peroxiredoxin | - |
| DW66_RS18205 () | 3957364..3958668 | + | 1305 | WP_038409901.1 | hypothetical protein | VF |
| DW66_RS18210 () | 3958683..3958951 | + | 269 | Protein_3626 | Tn3 family transposase | - |
| DW66_RS18215 () | 3959027..3960040 | + | 1014 | WP_038409903.1 | DUF4113 domain-containing protein | - |
| DW66_RS18230 () | 3960967..3961182 | + | 216 | Protein_3629 | N-acetyltransferase | - |
| DW66_RS18235 () | 3961166..3961978 | + | 813 | WP_038409905.1 | nucleotidyltransferase family protein | - |
| DW66_RS18240 () | 3962085..3963158 | + | 1074 | WP_038409906.1 | LPS export ABC transporter permease LptF | - |
| DW66_RS18245 () | 3963155..3964234 | + | 1080 | WP_038409908.1 | LPS export ABC transporter permease LptG | - |
| DW66_RS18250 () | 3964251..3965219 | + | 969 | WP_038409909.1 | acylglycerol kinase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|