MGE detailed information
MGE type: Prophage MGE length: 147470 bp
Accession: NZ_CP007594 Location: 5000309..5147778 Organism: Escherichia coli strain SEC470 Replicon: chromosome
Accession: NZ_CP007594 Location: 5000309..5147778 Organism: Escherichia coli strain SEC470 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DP32_RS25070 () | 4995433..4995876 | - | 444 | WP_000786399.1 | DNA polymerase III subunit chi | - |
| DP32_RS25075 () | 4996230..4997741 | - | 1512 | WP_000397144.1 | leucyl aminopeptidase | - |
| DP32_RS25080 () | 4998008..4999108 | + | 1101 | WP_000584114.1 | LPS export ABC transporter permease LptF | - |
| DP32_RS25085 () | 4999108..5000190 | + | 1083 | WP_001295681.1 | LPS export ABC transporter permease LptG | - |
| DP32_RS25090 () | 5000309..5001811 | - | 1503 | WP_014640076.1 | DUF853 domain-containing protein | - |
| DP32_RS25095 () | 5001941..5002960 | - | 1020 | WP_001300770.1 | NADPH-dependent aldehyde reductase Ahr | - |
| DP32_RS25105 () | 5003427..5004692 | + | 1266 | WP_001218934.1 | hypothetical protein ; Integrase | Integrase |
| DP32_RS25110 () | 5005009..5006190 | - | 1182 | Protein_4753 | phosphoethanolamine transferase | - |
| DP32_RS28180 () | 5006777..5007006 | + | 230 | Protein_4754 | transposase domain-containing protein | - |
| DP32_RS29695 () | 5007349..5007492 | + | 144 | WP_000050905.1 | hypothetical protein | - |
| DP32_RS25135 () | 5008037..5009254 | + | 1218 | WP_000179692.1 | MFS transporter | - |
| DP32_RS25140 () | 5009266..5010384 | + | 1119 | WP_000611568.1 | Gfo/Idh/MocA family oxidoreductase | - |
| DP32_RS28880 () | 5010427..5010552 | + | 126 | WP_000594406.1 | hypothetical protein | - |
| DP32_RS25145 () | 5010605..5010862 | - | 258 | WP_000255001.1 | hypothetical protein | - |
| DP32_RS29470 () | 5010852..5011088 | + | 237 | Protein_4760 | MFS transporter | - |
| DP32_RS25155 () | 5011176..5011414 | + | 239 | Protein_4761 | IS3 family transposase ISLad1 | Transposase |
| DP32_RS25160 () | 5011656..5012987 | + | 1332 | Protein_4762 | IS110 family transposase ISWpi13 | Transposase |
| DP32_RS29475 () | 5013193..5013315 | + | 123 | Protein_4763 | IS3 family transposase | - |
| DP32_RS25170 () | 5013807..5014504 | - | 698 | Protein_4764 | IS1 family transposase IS1R | Transposase |
| DP32_RS25180 () | 5014568..5015640 | + | 1073 | Protein_4765 | helicase YjhR | - |
| DP32_RS25185 () | 5016223..5017203 | - | 981 | WP_000991454.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| DP32_RS25190 () | 5017268..5018374 | - | 1107 | WP_001299704.1 | N-acetylneuraminate epimerase | - |
| DP32_RS25195 () | 5018394..5019110 | - | 717 | WP_014640078.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| DP32_RS25210 () | 5020565..5021167 | + | 603 | WP_000790583.1 | hypothetical protein | VF |
| DP32_RS25215 () | 5021646..5022242 | + | 597 | WP_000044700.1 | hypothetical protein | VF |
| DP32_RS25225 () | 5022724..5023272 | + | 549 | WP_000695574.1 | hypothetical protein | VF |
| DP32_RS25230 () | 5023337..5023875 | + | 539 | Protein_4772 | hypothetical protein | VF |
| DP32_RS25235 () | 5023912..5024637 | + | 726 | WP_000066581.1 | hypothetical protein | VF |
| DP32_RS25240 () | 5024704..5027340 | + | 2637 | WP_000120922.1 | hypothetical protein | VF |
| DP32_RS25245 () | 5027350..5027880 | + | 531 | WP_001244823.1 | hypothetical protein | VF |
| DP32_RS25250 () | 5027893..5028396 | + | 504 | WP_000872005.1 | hypothetical protein | VF |
| DP32_RS25255 () | 5028416..5029318 | + | 903 | WP_000832226.1 | hypothetical protein | VF |
| DP32_RS25260 () | 5029499..5030842 | - | 1344 | WP_000558251.1 | gluconate permease GntP | - |
| DP32_RS25270 () | 5031182..5032366 | + | 1185 | WP_000438591.1 | mannonate dehydratase | - |
| DP32_RS25275 () | 5032447..5033907 | + | 1461 | WP_000208180.1 | fructuronate reductase | - |
| DP32_RS25285 () | 5034122..5034895 | + | 774 | WP_000833694.1 | Uxu operon transcriptional regulator | - |
| DP32_RS25290 () | 5035070..5035767 | - | 698 | Protein_4782 | IS1 family transposase IS1A | Transposase |
| DP32_RS25295 () | 5035801..5036643 | - | 843 | WP_014640079.1 | DUF2686 family protein | - |
| DP32_RS29485 () | 5037235..5037318 | + | 84 | WP_120795393.1 | iraD leader peptide IdlP | - |
| DP32_RS25305 () | 5037315..5037707 | + | 393 | WP_000986215.1 | anti-adapter protein IraD | - |
| DP32_RS25310 () | 5037700..5038611 | - | 912 | WP_000340758.1 | hypochlorite stress DNA-binding transcriptional regulator HypT | - |
| DP32_RS25315 () | 5038676..5039848 | - | 1173 | WP_000568416.1 | beta-aspartyl-peptidase | - |
| DP32_RS25320 () | 5039861..5040322 | - | 462 | WP_000211971.1 | YjiG family protein | - |
| DP32_RS25325 () | 5040319..5041002 | - | 684 | WP_001295597.1 | nucleoside recognition pore and gate family inner membrane transporter | - |
| DP32_RS25330 () | 5041252..5041806 | + | 555 | WP_001151855.1 | RNA 2'-phosphotransferase | - |
| DP32_RS25335 () | 5041819..5042997 | - | 1179 | WP_001139962.1 | MFS transporter | - |
| DP32_RS25340 () | 5043065..5043925 | - | 861 | WP_001317601.1 | YjiK family protein | - |
| DP32_RS25345 () | 5043990..5044247 | - | 258 | WP_000666413.1 | DUF3343 domain-containing protein | - |
| DP32_RS25350 () | 5044244..5045011 | - | 768 | WP_001297641.1 | hypothetical protein | - |
| DP32_RS25355 () | 5045021..5046172 | - | 1152 | WP_001329087.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| DP32_RS25360 () | 5046288..5047568 | - | 1281 | WP_001037380.1 | DUF445 domain-containing protein | - |
| DP32_RS25365 () | 5047609..5048841 | - | 1233 | WP_001339512.1 | multidrug efflux MFS transporter MdtM | - |
| DP32_RS28215 () | 5048987..5049082 | - | 96 | Protein_4798 | dienelactone hydrolase family protein | - |
| DP32_RS28890 () | 5049139..5049836 | + | 698 | Protein_4799 | IS1 family transposase | - |
| DP32_RS25380 () | 5050035..5050322 | + | 288 | WP_001297643.1 | BrnT family toxin | Toxin Detail |
| DP32_RS25385 () | 5050309..5050611 | + | 303 | WP_000063156.1 | BrnA antitoxin family protein | Antitoxin Detail |
| DP32_RS25390 () | 5050645..5051601 | - | 957 | WP_001297640.1 | GTPase | - |
| DP32_RS25395 () | 5051612..5051815 | - | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| DP32_RS25400 () | 5051865..5054015 | - | 2151 | WP_001295524.1 | pyruvate/proton symporter BtsT | - |
| DP32_RS25410 () | 5054392..5056056 | + | 1665 | WP_000919540.1 | hypothetical protein | VF |
| DP32_RS25415 () | 5056105..5057466 | - | 1362 | WP_000410144.1 | MFS transporter | - |
| DP32_RS25420 () | 5057681..5058595 | - | 915 | WP_000091572.1 | GntR family transcriptional regulator | - |
| DP32_RS25425 () | 5058734..5059756 | + | 1023 | WP_000106043.1 | L-galactonate oxidoreductase | - |
| DP32_RS25430 () | 5059896..5062187 | - | 2292 | WP_001292680.1 | phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase | - |
| DP32_RS25435 () | 5062441..5062935 | - | 495 | WP_001308243.1 | DUF2501 domain-containing protein | - |
| DP32_RS25440 () | 5062984..5063721 | - | 738 | WP_000799911.1 | IS21 family transposase ISSme2 | Transposase |
| DP32_RS25445 () | 5063724..5064263 | - | 540 | WP_000098818.1 | primosomal protein DnaT | - |
| DP32_RS25450 () | 5064371..5064844 | - | 474 | WP_000538191.1 | threonine/serine exporter | - |
| DP32_RS25455 () | 5064835..5065605 | - | 771 | WP_001340933.1 | threonine/serine exporter ThrE family protein | - |
| DP32_RS25460 () | 5066224..5066949 | + | 726 | WP_000936624.1 | hypothetical protein | VF |
| DP32_RS25465 () | 5066907..5067593 | + | 687 | WP_024185667.1 | hypothetical protein | VF |
| DP32_RS25470 () | 5067622..5068410 | - | 789 | WP_000331478.1 | siderophore-iron reductase FhuF | - |
| DP32_RS25475 () | 5068551..5068787 | + | 237 | WP_001360092.1 | DUF1435 domain-containing protein | - |
| DP32_RS25500 () | 5069346..5070377 | - | 1032 | WP_001272359.1 | 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC | - |
| DP32_RS25505 () | 5070480..5070893 | + | 414 | WP_000204018.1 | DNA polymerase III subunit psi | - |
| DP32_RS25510 () | 5070862..5071308 | + | 447 | WP_001092465.1 | hypothetical protein | VF |
| DP32_RS25515 () | 5071323..5072000 | + | 678 | WP_000870712.1 | pyrimidine 5'-nucleotidase | - |
| DP32_RS25520 () | 5072386..5073609 | + | 1224 | WP_001218277.1 | hypothetical protein ; Integrase | Integrase |
| DP32_RS25525 () | 5073792..5077619 | + | 3828 | WP_001159678.1 | SIR2 family protein | - |
| DP32_RS29495 () | 5078016..5078636 | - | 621 | WP_000206803.1 | DUF551 domain-containing protein | - |
| DP32_RS25540 () | 5078636..5078998 | - | 363 | WP_001242723.1 | phage protein | - |
| DP32_RS25545 () | 5078989..5079525 | - | 537 | WP_000008209.1 | 5'-deoxynucleotidase | - |
| DP32_RS25550 () | 5079653..5080477 | - | 825 | WP_000081316.1 | DUF2303 family protein | - |
| DP32_RS25555 () | 5080543..5080905 | - | 363 | WP_000135688.1 | hypothetical protein | - |
| DP32_RS25565 () | 5081574..5082248 | - | 675 | WP_000848749.1 | LexA family transcriptional regulator | - |
| DP32_RS25570 () | 5082339..5082539 | + | 201 | WP_000388778.1 | helix-turn-helix domain-containing protein | - |
| DP32_RS25575 () | 5082583..5083134 | + | 552 | WP_000521508.1 | hypothetical protein | - |
| DP32_RS25580 () | 5083131..5083967 | + | 837 | WP_001087321.1 | ash family protein | - |
| DP32_RS25585 () | 5083960..5084196 | + | 237 | WP_000933947.1 | hypothetical protein | - |
| DP32_RS25590 () | 5084193..5085011 | + | 819 | WP_000061531.1 | helix-turn-helix domain-containing protein | - |
| DP32_RS25595 () | 5085008..5085502 | + | 495 | WP_001315196.1 | PerC family transcriptional regulator | - |
| DP32_RS25600 () | 5085502..5086155 | + | 654 | WP_014640085.1 | phage N-6-adenine-methyltransferase | - |
| DP32_RS25605 () | 5086152..5086478 | + | 327 | WP_000210169.1 | LexA family transcriptional regulator | - |
| DP32_RS25610 () | 5086475..5086864 | + | 390 | WP_000767103.1 | RusA family crossover junction endodeoxyribonuclease | - |
| DP32_RS25620 () | 5087048..5088276 | + | 1229 | WP_149006549.1 | IS3 family transposase IS2 | Transposase |
| DP32_RS25625 () | 5088283..5089029 | + | 747 | WP_044519660.1 | KilA-N domain-containing protein | - |
| DP32_RS25630 () | 5089037..5090026 | + | 990 | WP_024185670.1 | DUF968 domain-containing protein | - |
| DP32_RS25635 () | 5090040..5090792 | + | 753 | WP_001047110.1 | antitermination protein | - |
| DP32_RS25640 () | 5091046..5091249 | + | 204 | WP_000917724.1 | hypothetical protein | - |
| DP32_RS25645 () | 5091400..5092452 | + | 1053 | WP_000799656.1 | site-specific DNA-methyltransferase | - |
| DP32_RS25650 () | 5092520..5092735 | + | 216 | WP_000839596.1 | phage lysis protein EssD | - |
| DP32_RS25655 () | 5092735..5093232 | + | 498 | WP_001135305.1 | lysozyme RrrD | - |
| DP32_RS25660 () | 5093229..5093672 | + | 444 | WP_014640088.1 | lysis protein | - |
| DP32_RS25665 () | 5094053..5094373 | - | 321 | WP_000025002.1 | hypothetical protein | - |
| DP32_RS25670 () | 5094711..5095256 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
| DP32_RS25675 () | 5095231..5097156 | + | 1926 | WP_001027267.1 | phage terminase large subunit family protein | - |
| DP32_RS25680 () | 5097153..5097359 | + | 207 | WP_000198157.1 | gpW family protein | - |
| DP32_RS25685 () | 5097356..5098957 | + | 1602 | WP_001356325.1 | phage portal protein | - |
| DP32_RS25690 () | 5098938..5100257 | + | 1320 | WP_000123256.1 | S49 family peptidase | - |
| DP32_RS25695 () | 5100267..5100599 | + | 333 | WP_001299443.1 | head decoration protein | - |
| DP32_RS25700 () | 5100655..5101680 | + | 1026 | WP_000063221.1 | major capsid protein | - |
| DP32_RS25705 () | 5101722..5102117 | + | 396 | WP_000158880.1 | DNA-packaging protein FI | - |
| DP32_RS25710 () | 5102129..5102482 | + | 354 | WP_000753008.1 | head-tail joining protein | - |
| DP32_RS25715 () | 5102494..5103072 | + | 579 | WP_000985119.1 | phage tail protein | - |
| DP32_RS25720 () | 5103069..5103344 | + | 276 | Protein_4860 | phage tail protein | - |
| DP32_RS25725 () | 5103376..5104947 | - | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| DP32_RS25730 () | 5104967..5105314 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| DP32_RS25735 () | 5105314..5105991 | - | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| DP32_RS28240 () | 5106037..5106171 | + | 135 | Protein_4864 | phage tail protein | - |
| DP32_RS25745 () | 5106179..5106919 | + | 741 | WP_014640089.1 | phage tail protein | - |
| DP32_RS25750 () | 5106935..5107357 | + | 423 | WP_000479151.1 | phage minor tail protein G | - |
| DP32_RS25755 () | 5107339..5107773 | + | 435 | WP_000459458.1 | phage tail assembly protein T | - |
| DP32_RS25760 () | 5107766..5110345 | + | 2580 | WP_000840197.1 | phage tail tape measure protein | - |
| DP32_RS25765 () | 5110342..5110671 | + | 330 | WP_000847331.1 | phage tail protein | - |
| DP32_RS25770 () | 5110671..5111369 | + | 699 | WP_001152622.1 | phage minor tail protein L | - |
| DP32_RS25775 () | 5111375..5112118 | + | 744 | WP_014640090.1 | C40 family peptidase | - |
| DP32_RS25780 () | 5112055..5112657 | + | 603 | WP_000090847.1 | tail assembly protein | - |
| DP32_RS25785 () | 5112718..5116197 | + | 3480 | WP_000515695.1 | host specificity protein J | - |
| DP32_RS25790 () | 5116265..5116864 | + | 600 | WP_001233112.1 | hypothetical protein | VF |
| DP32_RS28245 () | 5116929..5120287 | + | 3359 | Protein_4875 | prophage tail fiber N-terminal domain-containing protein | - |
| DP32_RS25810 () | 5120287..5120859 | + | 573 | WP_024185674.1 | tail fiber assembly protein | - |
| DP32_RS25815 () | 5120870..5121415 | - | 546 | WP_001026781.1 | serine acetyltransferase | - |
| DP32_RS28250 () | 5121500..5121628 | + | 129 | Protein_4878 | helix-turn-helix domain-containing protein | - |
| DP32_RS25820 () | 5121732..5121980 | - | 249 | WP_001217539.1 | DinI-like family protein | - |
| DP32_RS25830 () | 5122200..5123786 | + | 1587 | WP_000202564.1 | peptide chain release factor 3 | - |
| DP32_RS25835 () | 5124179..5124784 | + | 606 | WP_014640092.1 | molecular chaperone OsmY | - |
| DP32_RS25840 () | 5124911..5125072 | + | 162 | WP_000490275.1 | DUF1328 domain-containing protein | - |
| DP32_RS25845 () | 5125194..5126267 | + | 1074 | WP_001550260.1 | patatin family protein | - |
| DP32_RS25850 () | 5126264..5127046 | + | 783 | WP_000563071.1 | metal-dependent hydrolase | - |
| DP32_RS25855 () | 5127561..5128424 | - | 864 | WP_001088378.1 | YjjW family glycine radical enzyme activase | - |
| DP32_RS25860 () | 5128396..5129946 | - | 1551 | WP_001143241.1 | YjjI family glycine radical enzyme | - |
| DP32_RS25870 () | 5130204..5130983 | + | 780 | WP_001295412.1 | deoxyribose-phosphate aldolase | - |
| DP32_RS25875 () | 5131110..5132432 | + | 1323 | WP_000477811.1 | thymidine phosphorylase | - |
| DP32_RS25880 () | 5132484..5133707 | + | 1224 | WP_000816471.1 | phosphopentomutase | - |
| DP32_RS25885 () | 5133764..5134483 | + | 720 | WP_000224877.1 | purine-nucleoside phosphorylase | - |
| DP32_RS29700 () | 5134758..5134907 | - | 150 | WP_000566153.1 | hypothetical protein | - |
| DP32_RS29500 () | 5134939..5135955 | - | 1017 | WP_000105890.1 | hypothetical protein | VF |
| DP32_RS29505 () | 5135983..5136627 | - | 645 | WP_000124615.1 | YtjB family periplasmic protein | - |
| DP32_RS25905 () | 5136733..5137701 | + | 969 | WP_001132956.1 | phosphoserine phosphatase | - |
| DP32_RS25910 () | 5137750..5139132 | + | 1383 | WP_001029698.1 | DNA repair protein RadA | - |
| DP32_RS25915 () | 5139153..5140385 | + | 1233 | WP_000093813.1 | multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR | - |
| DP32_RS25925 () | 5140692..5142359 | - | 1668 | WP_000046749.1 | hypothetical protein | VF |
| DP32_RS25930 () | 5142570..5144507 | + | 1938 | WP_014640093.1 | murein transglycosylase | - |
| DP32_RS25935 () | 5144597..5144923 | + | 327 | WP_000068679.1 | trp operon repressor | - |
| DP32_RS25940 () | 5145008..5145529 | - | 522 | WP_001341279.1 | inosine/xanthosine triphosphatase | - |
| DP32_RS25945 () | 5145581..5146228 | + | 648 | WP_000942344.1 | 2,3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB | - |
| DP32_RS25950 () | 5146225..5147094 | - | 870 | WP_000371666.1 | MDR efflux pump AcrAB transcriptional activator RobA | - |
| DP32_RS25955 () | 5147305..5147778 | + | 474 | WP_000875487.1 | protein CreA | - |
| DP32_RS25960 () | 5147791..5148480 | + | 690 | WP_001188663.1 | two-component system response regulator CreB | - |
| DP32_RS25965 () | 5148480..5149904 | + | 1425 | WP_001219619.1 | two-component system sensor histidine kinase CreC | - |
| DP32_RS25970 () | 5149962..5151314 | + | 1353 | WP_000920337.1 | cell envelope integrity protein CreD | - |
| DP32_RS25975 () | 5151374..5152090 | - | 717 | WP_001194358.1 | two-component system response regulator ArcA | - |
| DP32_RS25980 () | 5152186..5152326 | + | 141 | WP_001303782.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|