MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 47196 bp
Accession: NZ_CP007593 Location: 981499..1028694 Organism: Streptococcus pneumoniae strain NT_110_58 Replicon: chromosome
Accession: NZ_CP007593 Location: 981499..1028694 Organism: Streptococcus pneumoniae strain NT_110_58 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| spnnt_RS12655 () | 976849..976965 | + | 117 | WP_001814923.1 | tetracycline resistance determinant leader peptide | - |
| spnnt_RS04815 () | 976981..978900 | + | 1920 | WP_000691734.1 | tetracycline resistance ribosomal protection protein Tet(M) | - |
| spnnt_RS12660 () | 979019..979186 | + | 168 | WP_000336323.1 | cysteine-rich KTR domain-containing protein | - |
| spnnt_RS04825 () | 979246..979599 | - | 354 | WP_001227347.1 | helix-turn-helix transcriptional regulator | - |
| spnnt_RS04830 () | 980104..980526 | + | 423 | WP_000804885.1 | sigma-70 family RNA polymerase sigma factor | - |
| spnnt_RS04835 () | 980523..980753 | + | 231 | WP_000857133.1 | helix-turn-helix domain-containing protein | - |
| spnnt_RS04840 () | 981214..981417 | + | 204 | WP_000814511.1 | excisionase | - |
| spnnt_RS04845 () | 981499..982716 | + | 1218 | WP_001291561.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| spnnt_RS04850 () | 982986..983576 | + | 591 | WP_000227919.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| spnnt_RS04855 () | 983576..984412 | + | 837 | WP_016398732.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| spnnt_RS04860 () | 984695..984994 | + | 300 | WP_000869763.1 | hypothetical protein | - |
| spnnt_RS04865 () | 984984..985472 | + | 489 | WP_000093677.1 | hypothetical protein | - |
| spnnt_RS04870 () | 985472..987349 | + | 1878 | WP_016398731.1 | type IV secretory system conjugative DNA transfer family protein | - |
| spnnt_RS04875 () | 987370..987612 | + | 243 | WP_000627865.1 | hypothetical protein | - |
| spnnt_RS04880 () | 987629..988483 | + | 855 | WP_001054257.1 | conjugal transfer protein TrbL | - |
| spnnt_RS04885 () | 988537..988896 | + | 360 | WP_001097589.1 | PrgI family protein | - |
| spnnt_RS04890 () | 988889..991204 | + | 2316 | Protein_948 | AAA family ATPase | - |
| spnnt_RS04895 () | 991216..993921 | + | 2706 | WP_016569825.1 | CHAP domain-containing protein | - |
| spnnt_RS04900 () | 994630..996552 | + | 1923 | WP_016399336.1 | group II intron reverse transcriptase/maturase | - |
| spnnt_RS13440 () | 997000..998240 | + | 1241 | Protein_951 | IS3 family transposase | - |
| spnnt_RS04920 () | 998246..999559 | + | 1314 | WP_016398973.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| spnnt_RS04925 () | 999695..1000965 | - | 1271 | Protein_953 | IS110 family transposase ISSpn10 | Transposase |
| spnnt_RS04930 () | 1001508..1002149 | + | 642 | WP_016397477.1 | hypothetical protein | - |
| spnnt_RS04935 () | 1002159..1003244 | + | 1086 | Protein_955 | toprim domain-containing protein | - |
| spnnt_RS04940 () | 1003295..1003528 | + | 234 | WP_000152423.1 | hypothetical protein | - |
| spnnt_RS04945 () | 1003525..1003908 | + | 384 | WP_002933294.1 | hypothetical protein | - |
| spnnt_RS04950 () | 1003946..1004218 | + | 273 | WP_016399544.1 | hypothetical protein | - |
| spnnt_RS04955 () | 1004288..1004764 | + | 477 | WP_025173761.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| spnnt_RS04960 () | 1004764..1005543 | + | 780 | WP_039704000.1 | zeta toxin family protein | Toxin Detail |
| spnnt_RS04965 () | 1005545..1006941 | + | 1397 | Protein_961 | hypothetical protein | - |
| spnnt_RS04970 () | 1006943..1007638 | + | 696 | WP_016399482.1 | hypothetical protein | - |
| spnnt_RS04975 () | 1007635..1010283 | + | 2649 | WP_016399481.1 | AAA family ATPase | - |
| spnnt_RS04980 () | 1010672..1011031 | + | 360 | WP_000529543.1 | hypothetical protein | - |
| spnnt_RS04985 () | 1011041..1011406 | + | 366 | WP_016399480.1 | MobC family plasmid mobilization relaxosome protein | - |
| spnnt_RS12685 () | 1011393..1013259 | + | 1867 | Protein_966 | relaxase/mobilization nuclease domain-containing protein | - |
| spnnt_RS05000 () | 1013304..1014158 | - | 855 | WP_016399479.1 | Rgg/GadR/MutR family transcriptional regulator | - |
| spnnt_RS13705 () | 1014238..1014300 | + | 63 | WP_133457516.1 | SHP2/SHP3 family peptide pheromone | - |
| spnnt_RS05005 () | 1014381..1014923 | + | 543 | WP_016399478.1 | hypothetical protein | VF |
| spnnt_RS05010 () | 1014920..1016059 | + | 1140 | WP_031241576.1 | ABC transporter permease | - |
| spnnt_RS05015 () | 1016122..1016763 | + | 642 | WP_016399476.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| spnnt_RS14120 () | 1016776..1016946 | + | 171 | WP_000757485.1 | hypothetical protein | - |
| spnnt_RS05025 () | 1016980..1017708 | + | 729 | WP_001018880.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| spnnt_RS05030 () | 1017701..1018438 | + | 738 | WP_016397757.1 | hypothetical protein | - |
| spnnt_RS05035 () | 1018451..1019161 | + | 711 | WP_016399475.1 | hypothetical protein | - |
| spnnt_RS05040 () | 1019704..1019925 | + | 222 | WP_016397755.1 | helix-turn-helix domain-containing protein | - |
| spnnt_RS05045 () | 1020231..1020545 | + | 315 | WP_016399474.1 | DUF3173 family protein | - |
| spnnt_RS05050 () | 1020472..1021657 | + | 1186 | Protein_978 | Tyrosine recombinase XerC ; Integrase | Integrase |
| spnnt_RS05055 () | 1022114..1023460 | - | 1347 | WP_016399473.1 | NADP-specific glutamate dehydrogenase | - |
| spnnt_RS12695 () | 1023906..1024439 | + | 534 | Protein_980 | IS630 family transposase IS630-Spn1 | Transposase |
| spnnt_RS12700 () | 1024592..1025918 | + | 1327 | Protein_981 | ISL3 family transposase | - |
| spnnt_RS05080 () | 1026025..1027236 | - | 1212 | WP_016399520.1 | hypothetical protein | VF |
| spnnt_RS05085 () | 1027583..1028535 | + | 953 | Protein_983 | IS30 family transposase ISSpn8 | Transposase |
| spnnt_RS05090 () | 1028608..1028892 | - | 285 | WP_001808393.1 | type B 50S ribosomal protein L31 | - |
| spnnt_RS05095 () | 1028946..1029881 | - | 936 | WP_000401781.1 | bifunctional oligoribonuclease/PAP phosphatase NrnA | - |
| spnnt_RS05100 () | 1029985..1030428 | + | 444 | WP_016399517.1 | flavodoxin | - |
| spnnt_RS05105 () | 1030544..1030810 | + | 267 | WP_000362440.1 | chorismate mutase | - |
| spnnt_RS05110 () | 1030807..1031181 | + | 375 | WP_016399516.1 | fluoride efflux transporter CrcB | - |
| spnnt_RS05115 () | 1031175..1031504 | + | 330 | WP_016398167.1 | fluoride efflux transporter CrcB | - |
| spnnt_RS05120 () | 1031623..1031970 | + | 348 | WP_001068669.1 | 50S ribosomal protein L19 | - |
| spnnt_RS14125 () | 1032250..1032417 | + | 168 | WP_001812200.1 | hypothetical protein | - |
| spnnt_RS05130 () | 1032649..1033503 | - | 855 | WP_016399514.1 | Rgg/GadR/MutR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|