MGE detailed information
MGE type: Genomic_island MGE length: 15147 bp
Accession: NZ_CP007592 Location: 4149854..4165000 Organism: Escherichia coli O157:H16 strain Santai Replicon: chromosome
Accession: NZ_CP007592 Location: 4149854..4165000 Organism: Escherichia coli O157:H16 strain Santai Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CH99_RS20475 () | 4145907..4146851 | + | 945 | WP_000947082.1 | nickel ABC transporter permease subunit NikB | - |
| CH99_RS20480 () | 4146848..4147681 | + | 834 | WP_001008963.1 | nickel ABC transporter permease subunit NikC | - |
| CH99_RS20485 () | 4147681..4148445 | + | 765 | WP_001136211.1 | nickel import ATP-binding protein NikD | - |
| CH99_RS20490 () | 4148442..4149248 | + | 807 | WP_021557287.1 | nickel import ATP-binding protein NikE | - |
| CH99_RS20495 () | 4149254..4149655 | + | 402 | WP_001190062.1 | nickel-responsive transcriptional regulator NikR | - |
| CH99_RS20500 () | 4149854..4150600 | + | 747 | WP_001308115.1 | GntR family transcriptional regulator | - |
| CH99_RS20505 () | 4150625..4151098 | + | 474 | WP_001161650.1 | PTS sugar transporter subunit IIA | - |
| CH99_RS20510 () | 4151095..4151376 | + | 282 | WP_000084025.1 | PTS sugar transporter subunit IIB | - |
| CH99_RS20515 () | 4151453..4152811 | + | 1359 | WP_001308116.1 | PTS galactitol transporter subunit IIC | - |
| CH99_RS20520 () | 4152804..4154312 | + | 1509 | WP_021557288.1 | xylulose kinase | - |
| CH99_RS20525 () | 4154302..4154571 | + | 270 | WP_000933060.1 | HPr family phosphocarrier protein | - |
| CH99_RS20530 () | 4154603..4155463 | + | 861 | WP_021557289.1 | class II aldolase | - |
| CH99_RS20535 () | 4155513..4155872 | - | 360 | WP_000593555.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| CH99_RS20540 () | 4155869..4156144 | - | 276 | WP_001259382.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| CH99_RS20545 () | 4156217..4157341 | - | 1125 | WP_021557290.1 | ABC transporter permease | - |
| CH99_RS20550 () | 4157341..4160076 | - | 2736 | WP_000149130.1 | Ribosome-associated ATPase | VF |
| CH99_RS20555 () | 4160073..4161140 | - | 1068 | WP_000361517.1 | HlyD family secretion protein | - |
| CH99_RS20560 () | 4161506..4163128 | - | 1623 | WP_021557291.1 | DUF4049 domain-containing protein | - |
| CH99_RS20565 () | 4163390..4165000 | - | 1611 | WP_021557292.1 | DUF4049 domain-containing protein | - |
| CH99_RS20580 () | 4165383..4166435 | + | 1053 | WP_001028905.1 | DUF2776 domain-containing protein | - |
| CH99_RS20585 () | 4166752..4167954 | - | 1203 | WP_000439188.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| CH99_RS20590 () | 4168186..4169685 | + | 1500 | WP_000902780.1 | inorganic phosphate transporter PitA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|