NZ_CP0075924149854..4165000

MGE detailed information

MGE type: Genomic_island        MGE length: 15147 bp
Accession: NZ_CP007592        Location: 4149854..4165000         Organism: Escherichia coli O157:H16 strain Santai       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

CH99_RS20475CH99_RS20480CH99_RS20485CH99_RS20490CH99_RS20495CH99_RS20500CH99_RS20505CH99_RS20510CH99_RS20515CH99_RS20520CH99_RS20525CH99_RS20530CH99_RS20580CH99_RS20590CH99_RS20535CH99_RS20540CH99_RS20545CH99_RS20550CH99_RS20555CH99_RS20560CH99_RS20565CH99_RS20585
Location: 4145907..4146851 (945 bp)
Type: Others
Protein ID: WP_000947082.1
Location: 4146848..4147681 (834 bp)
Type: Others
Protein ID: WP_001008963.1
Location: 4147681..4148445 (765 bp)
Type: Others
Protein ID: WP_001136211.1
Location: 4148442..4149248 (807 bp)
Type: Others
Protein ID: WP_021557287.1
Location: 4149254..4149655 (402 bp)
Type: Others
Protein ID: WP_001190062.1
Location: 4149854..4150600 (747 bp)
Type: Others
Protein ID: WP_001308115.1
Location: 4150625..4151098 (474 bp)
Type: Others
Protein ID: WP_001161650.1
Location: 4151095..4151376 (282 bp)
Type: Others
Protein ID: WP_000084025.1
Location: 4151453..4152811 (1359 bp)
Type: Others
Protein ID: WP_001308116.1
Location: 4152804..4154312 (1509 bp)
Type: Others
Protein ID: WP_021557288.1
Location: 4154302..4154571 (270 bp)
Type: Others
Protein ID: WP_000933060.1
Location: 4154603..4155463 (861 bp)
Type: Others
Protein ID: WP_021557289.1
Location: 4165383..4166435 (1053 bp)
Type: Others
Protein ID: WP_001028905.1
Location: 4168186..4169685 (1500 bp)
Type: Others
Protein ID: WP_000902780.1
Location: 4155513..4155872 (360 bp)
Type: Antitoxin
Protein ID: WP_000593555.1
Location: 4155869..4156144 (276 bp)
Type: Toxin
Protein ID: WP_001259382.1
Location: 4156217..4157341 (1125 bp)
Type: Others
Protein ID: WP_021557290.1
Location: 4157341..4160076 (2736 bp)
Type: VF
Protein ID: WP_000149130.1
Location: 4160073..4161140 (1068 bp)
Type: Others
Protein ID: WP_000361517.1
Location: 4161506..4163128 (1623 bp)
Type: Others
Protein ID: WP_021557291.1
Location: 4163390..4165000 (1611 bp)
Type: Others
Protein ID: WP_021557292.1
Location: 4166752..4167954 (1203 bp)
Type: Others
Protein ID: WP_000439188.1
ToxinAntibiotic ResistanceTransposaseIntegraseOthersAntitoxinVirulence FactorRelaxaseoriT
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
CH99_RS20475 ()4145907..4146851+945WP_000947082.1nickel ABC transporter permease subunit NikB-
CH99_RS20480 ()4146848..4147681+834WP_001008963.1nickel ABC transporter permease subunit NikC-
CH99_RS20485 ()4147681..4148445+765WP_001136211.1nickel import ATP-binding protein NikD-
CH99_RS20490 ()4148442..4149248+807WP_021557287.1nickel import ATP-binding protein NikE-
CH99_RS20495 ()4149254..4149655+402WP_001190062.1nickel-responsive transcriptional regulator NikR-
CH99_RS20500 ()4149854..4150600+747WP_001308115.1GntR family transcriptional regulator-
CH99_RS20505 ()4150625..4151098+474WP_001161650.1PTS sugar transporter subunit IIA-
CH99_RS20510 ()4151095..4151376+282WP_000084025.1PTS sugar transporter subunit IIB-
CH99_RS20515 ()4151453..4152811+1359WP_001308116.1PTS galactitol transporter subunit IIC-
CH99_RS20520 ()4152804..4154312+1509WP_021557288.1xylulose kinase-
CH99_RS20525 ()4154302..4154571+270WP_000933060.1HPr family phosphocarrier protein-
CH99_RS20530 ()4154603..4155463+861WP_021557289.1class II aldolase-
CH99_RS20535 ()4155513..4155872-360WP_000593555.1type II toxin-antitoxin system HicB family antitoxinAntitoxin Detail
CH99_RS20540 ()4155869..4156144-276WP_001259382.1type II toxin-antitoxin system HicA family toxinToxin Detail
CH99_RS20545 ()4156217..4157341-1125WP_021557290.1ABC transporter permease-
CH99_RS20550 ()4157341..4160076-2736WP_000149130.1Ribosome-associated ATPaseVF
CH99_RS20555 ()4160073..4161140-1068WP_000361517.1HlyD family secretion protein-
CH99_RS20560 ()4161506..4163128-1623WP_021557291.1DUF4049 domain-containing protein-
CH99_RS20565 ()4163390..4165000-1611WP_021557292.1DUF4049 domain-containing protein-
CH99_RS20580 ()4165383..4166435+1053WP_001028905.1DUF2776 domain-containing protein-
Showing 1 to 20 of 22 rows rows per page

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

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Detail
Organism
MGE type
Related TA
Genome accession
Coordinates
Mash
distance
No matching records found