MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 76381 bp
Accession: NZ_CP007572 Location: 192991..269371 Organism: Streptococcus agalactiae strain GBS6 Replicon: chromosome
Accession: NZ_CP007572 Location: 192991..269371 Organism: Streptococcus agalactiae strain GBS6 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DX05_RS11120 () | 189029..189619 | - | 591 | WP_052471775.1 | helix-turn-helix domain-containing protein | - |
| DX05_RS01125 () | 189842..190045 | + | 204 | WP_003066809.1 | transcriptional regulator | - |
| DX05_RS01130 () | 190060..190467 | + | 408 | WP_024053155.1 | hypothetical protein | - |
| DX05_RS01135 () | 190484..191230 | + | 747 | WP_041326052.1 | hypothetical protein | - |
| DX05_RS01140 () | 191221..191853 | + | 633 | WP_024053153.1 | Rha family transcriptional regulator | - |
| DX05_RS01145 () | 192301..192828 | + | 528 | WP_024053152.1 | hypothetical protein | - |
| DX05_RS12005 () | 192825..193001 | + | 177 | WP_174721377.1 | hypothetical protein | - |
| DX05_RS01150 () | 192991..193227 | + | 237 | WP_041326054.1 | hypothetical protein | - |
| DX05_RS01155 () | 193224..193574 | + | 351 | WP_024053150.1 | HTH domain-containing protein | - |
| DX05_RS01160 () | 193577..193849 | + | 273 | WP_041326056.1 | hypothetical protein | - |
| DX05_RS01165 () | 193846..194010 | + | 165 | WP_041326058.1 | hypothetical protein | - |
| DX05_RS12010 () | 193997..194143 | + | 147 | WP_181970976.1 | hypothetical protein | - |
| DX05_RS01170 () | 194145..195002 | + | 858 | WP_041326060.1 | primase alpha helix C-terminal domain-containing protein | - |
| DX05_RS01175 () | 195085..196533 | + | 1449 | WP_041326850.1 | DNA primase family protein | - |
| DX05_RS01180 () | 197391..197792 | + | 402 | Protein_181 | hypothetical protein | - |
| DX05_RS01185 () | 197973..198416 | + | 444 | WP_024053143.1 | DUF1492 domain-containing protein | - |
| DX05_RS01190 () | 198464..199042 | + | 579 | WP_024053142.1 | hypothetical protein | - |
| DX05_RS01195 () | 199042..199377 | + | 336 | WP_041326062.1 | hypothetical protein | - |
| DX05_RS01205 () | 200156..200347 | + | 192 | WP_003038349.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| DX05_RS01210 () | 200384..200764 | + | 381 | WP_041326065.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| DX05_RS01215 () | 201029..202288 | - | 1260 | WP_041326067.1 | tyrosine--tRNA ligase | - |
| DX05_RS01220 () | 202399..204696 | + | 2298 | WP_041326069.1 | penicillin-binding protein PBP1B | - |
| DX05_RS01225 () | 205220..208795 | + | 3576 | WP_000907191.1 | DNA-directed RNA polymerase subunit beta | - |
| DX05_RS01230 () | 208912..212562 | + | 3651 | WP_000228729.1 | DNA-directed RNA polymerase subunit beta' | - |
| DX05_RS01235 () | 212676..213041 | + | 366 | WP_000285374.1 | DUF1033 family protein | - |
| DX05_RS01240 () | 213732..215009 | + | 1278 | WP_001292556.1 | group II intron reverse transcriptase/maturase | - |
| DX05_RS01245 () | 215059..216471 | - | 1413 | WP_017771557.1 | IS1182 family transposase ISSth2 | Transposase |
| DX05_RS01250 () | 216636..217568 | + | 933 | Protein_194 | hypothetical protein | VF |
| DX05_RS01255 () | 217453..218448 | + | 996 | Protein_195 | type II secretion system F family protein | - |
| DX05_RS01270 () | 219976..220431 | + | 456 | WP_000793378.1 | competence protein ComGF | - |
| DX05_RS01275 () | 220409..220780 | + | 372 | WP_000601101.1 | hypothetical protein | - |
| DX05_RS01280 () | 220895..221869 | + | 975 | WP_001008569.1 | class I SAM-dependent methyltransferase | - |
| DX05_RS01285 () | 221901..223094 | + | 1194 | WP_000047534.1 | acetate kinase | - |
| DX05_RS01290 () | 223222..223414 | + | 193 | Protein_201 | helix-turn-helix transcriptional regulator | - |
| DX05_RS11170 () | 223408..223659 | + | 252 | WP_001872485.1 | hypothetical protein | - |
| DX05_RS01295 () | 223728..224393 | + | 666 | WP_000008108.1 | CPBP family intramembrane metalloprotease | - |
| DX05_RS01300 () | 224414..225184 | - | 771 | WP_001881026.1 | pyrroline-5-carboxylate reductase | - |
| DX05_RS01305 () | 225254..226321 | - | 1068 | WP_001281321.1 | glutamyl aminopeptidase | - |
| DX05_RS01310 () | 226506..226745 | - | 240 | WP_000660182.1 | hypothetical protein | - |
| DX05_RS01315 () | 226906..227190 | + | 285 | WP_000791272.1 | DUF4651 domain-containing protein | - |
| DX05_RS01320 () | 227187..227510 | + | 324 | WP_000602780.1 | thioredoxin family protein | - |
| DX05_RS01325 () | 227543..228169 | + | 627 | WP_000578324.1 | DUF4479 and tRNA-binding domain-containing protein | - |
| DX05_RS01330 () | 228223..228938 | - | 716 | Protein_210 | Ubiquinone biosynthesis O-methyltransferase | VF |
| DX05_RS01335 () | 229019..229414 | + | 396 | WP_000282446.1 | single-stranded DNA-binding protein | - |
| DX05_RS01340 () | 229538..230182 | + | 645 | WP_000416614.1 | HAD family hydrolase | - |
| DX05_RS01345 () | 230209..231954 | + | 1746 | WP_000930328.1 | hypothetical protein | VF |
| DX05_RS01350 () | 231935..232679 | + | 745 | Protein_214 | LytTR family transcriptional regulator DNA-binding domain-containing protein | - |
| DX05_RS01355 () | 232849..233304 | + | 456 | WP_000683317.1 | CidA/LrgA family protein | - |
| DX05_RS01360 () | 233306..234034 | + | 729 | WP_000421730.1 | antiholin-like protein LrgB | - |
| DX05_RS01365 () | 234277..235905 | + | 1629 | WP_000170509.1 | ABC transporter substrate-binding protein | - |
| DX05_RS01370 () | 236018..236995 | + | 978 | WP_000680645.1 | ABC transporter permease | - |
| DX05_RS01375 () | 236992..237813 | + | 822 | WP_000603397.1 | ABC transporter permease | - |
| DX05_RS01380 () | 237825..238628 | + | 804 | WP_000140980.1 | ABC transporter ATP-binding protein | - |
| DX05_RS01385 () | 238612..239238 | + | 627 | WP_000171306.1 | ABC transporter ATP-binding protein | - |
| DX05_RS01390 () | 239521..241551 | + | 2031 | WP_000434616.1 | PTS system trehalose-specific EIIBC component | - |
| DX05_RS01395 () | 241773..243398 | + | 1626 | WP_000151015.1 | alpha,alpha-phosphotrehalase | - |
| DX05_RS01400 () | 243614..245650 | + | 2037 | WP_000228186.1 | BglG family transcription antiterminator | - |
| DX05_RS01405 () | 245653..245937 | + | 285 | WP_000944235.1 | PTS sugar transporter subunit IIB | - |
| DX05_RS01410 () | 245950..247305 | + | 1356 | WP_000677351.1 | PTS ascorbate transporter subunit IIC | - |
| DX05_RS01415 () | 247308..248165 | + | 858 | WP_000203493.1 | transketolase | - |
| DX05_RS01420 () | 248162..249091 | + | 930 | WP_001203822.1 | transketolase | - |
| DX05_RS01425 () | 249200..250459 | + | 1260 | WP_001203064.1 | ferric reductase-like transmembrane domain-containing protein | - |
| DX05_RS01430 () | 250547..250816 | + | 270 | WP_001018249.1 | 30S ribosomal protein S15 | - |
| DX05_RS01435 () | 251197..253326 | + | 2130 | WP_000043841.1 | polyribonucleotide nucleotidyltransferase | - |
| DX05_RS01440 () | 253328..254080 | + | 753 | WP_000204781.1 | SseB family protein | - |
| DX05_RS01445 () | 254089..254673 | + | 585 | WP_000539954.1 | serine O-acetyltransferase | - |
| DX05_RS01450 () | 254683..254865 | + | 183 | WP_000656476.1 | lipoprotein | - |
| DX05_RS01455 () | 254862..256205 | + | 1344 | WP_000591130.1 | cysteine--tRNA ligase | - |
| DX05_RS01460 () | 256198..256584 | + | 387 | WP_000568029.1 | Mini-ribonuclease 3 | - |
| DX05_RS01465 () | 256710..258179 | + | 1470 | WP_041326110.1 | IS1182 family transposase ISSth2 | Transposase |
| DX05_RS01470 () | 258247..259002 | + | 756 | WP_000178021.1 | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | - |
| DX05_RS01475 () | 258999..259517 | + | 519 | WP_000716636.1 | NYN domain-containing protein | - |
| DX05_RS01480 () | 259610..260470 | + | 861 | WP_000143135.1 | DegV family protein | - |
| DX05_RS01485 () | 261008..261130 | + | 123 | WP_000793594.1 | ISNCY family transposase ISH7A | Transposase |
| DX05_RS01490 () | 261352..261798 | + | 447 | WP_001867156.1 | 50S ribosomal protein L13 | - |
| DX05_RS01495 () | 261819..262211 | + | 393 | WP_000035940.1 | 30S ribosomal protein S9 | - |
| DX05_RS01500 () | 262339..263493 | - | 1155 | WP_000022172.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| DX05_RS01505 () | 263562..264113 | - | 552 | WP_001097380.1 | helix-turn-helix domain-containing protein | - |
| DX05_RS01510 () | 264278..264571 | + | 294 | WP_000331953.1 | hypothetical protein | - |
| DX05_RS01515 () | 264712..264993 | + | 282 | WP_000134666.1 | helix-turn-helix domain-containing protein | - |
| DX05_RS01520 () | 264999..265326 | + | 328 | Protein_248 | replication initiator protein A | - |
| DX05_RS01525 () | 265330..265971 | + | 642 | WP_000591144.1 | hypothetical protein | - |
| DX05_RS01535 () | 266271..267146 | + | 876 | WP_000421240.1 | hypothetical protein | - |
| DX05_RS01540 () | 267182..267616 | + | 435 | WP_001220479.1 | hypothetical protein | - |
| DX05_RS01545 () | 267933..269189 | + | 1257 | WP_000122836.1 | plasmid recombination protein | - |
| DX05_RS01550 () | 269357..269827 | + | 471 | WP_000130119.1 | hypothetical protein | - |
| DX05_RS01555 () | 270132..270467 | - | 336 | WP_000384859.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| DX05_RS01560 () | 270457..270744 | - | 288 | WP_000259017.1 | hypothetical protein | - |
| DX05_RS01565 () | 271251..271541 | + | 291 | WP_000078284.1 | WXG100 family type VII secretion target | - |
| DX05_RS01570 () | 271643..272050 | + | 408 | WP_000749960.1 | hypothetical protein | - |
| DX05_RS01575 () | 272136..272543 | + | 408 | WP_000749954.1 | hypothetical protein | - |
| DX05_RS01580 () | 273077..273757 | + | 681 | WP_025194578.1 | hypothetical protein | - |
| DX05_RS01585 () | 273742..274128 | + | 387 | WP_000259071.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|