MGE detailed information
MGE type: Genomic_island MGE length: 47927 bp
Accession: NZ_CP007557 Location: 1231517..1279443 Organism: Citrobacter freundii CFNIH1 Replicon: chromosome
Accession: NZ_CP007557 Location: 1231517..1279443 Organism: Citrobacter freundii CFNIH1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CFNIH1_RS05885 () | 1227855..1229237 | - | 1383 | WP_038635456.1 | glycoside-pentoside-hexuronide family transporter | - |
| CFNIH1_RS05895 () | 1229922..1231106 | + | 1185 | WP_001218910.1 | tyrosine-type recombinase/integrase | - |
| CFNIH1_RS05900 () | 1231517..1232560 | + | 1044 | WP_000999850.1 | hypothetical protein | - |
| CFNIH1_RS05905 () | 1232958..1234028 | - | 1071 | WP_000412404.1 | LacI family transcriptional regulator | - |
| CFNIH1_RS05910 () | 1234290..1235591 | + | 1302 | WP_001329026.1 | MFS transporter | - |
| CFNIH1_RS05915 () | 1235606..1237987 | + | 2382 | WP_038635468.1 | glycoside hydrolase family 31 protein | - |
| CFNIH1_RS05920 () | 1238635..1239120 | + | 486 | WP_000157061.1 | single-stranded DNA-binding protein | - |
| CFNIH1_RS05925 () | 1239174..1240753 | + | 1580 | Protein_1166 | conjugal transfer protein TrbC | - |
| CFNIH1_RS05930 () | 1240794..1241267 | - | 474 | Protein_1167 | IS3 family transposase IS629 | Transposase |
| CFNIH1_RS05935 () | 1241357..1242865 | - | 1509 | WP_038635474.1 | group II intron reverse transcriptase/maturase | - |
| CFNIH1_RS27905 () | 1243538..1244276 | - | 739 | Protein_1169 | IS3 family transposase IS1203 | Transposase |
| CFNIH1_RS05950 () | 1244507..1245931 | - | 1425 | Protein_1170 | IS66 family transposase ISEc43 | Transposase |
| CFNIH1_RS05960 () | 1245962..1246312 | - | 351 | WP_038635488.1 | IS66 family transposase IS682 | Transposase |
| CFNIH1_RS05965 () | 1246309..1246734 | - | 426 | WP_038635492.1 | IS66 family transposase ISEc23 | Transposase |
| CFNIH1_RS05970 () | 1247151..1247848 | + | 698 | Protein_1173 | IS1 family transposase IS1X2 | Transposase |
| CFNIH1_RS26405 () | 1247863..1249026 | + | 1164 | Protein_1174 | IS4 family transposase IS10R | Transposase |
| CFNIH1_RS05975 () | 1249109..1249806 | - | 698 | Protein_1175 | IS1 family transposase IS1R | Transposase |
| CFNIH1_RS05980 () | 1250085..1250744 | + | 660 | WP_000412211.1 | Chloramphenicol acetyltransferase | ARG |
| CFNIH1_RS05985 () | 1250945..1251322 | - | 378 | WP_000656305.1 | GNAT family N-acetyltransferase | - |
| CFNIH1_RS05990 () | 1251389..1254355 | - | 2967 | WP_001138064.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| CFNIH1_RS05995 () | 1254358..1254918 | - | 561 | WP_000147567.1 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| CFNIH1_RS27910 () | 1255044..1255394 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| CFNIH1_RS06005 () | 1255597..1256610 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| CFNIH1_RS06010 () | 1256756..1257289 | + | 534 | WP_000381802.1 | 2''-aminoglycoside nucleotidyltransferase | ARG |
| CFNIH1_RS06015 () | 1257372..1258004 | + | 633 | WP_000186237.1 | Chloramphenicol acetyltransferase | VF |
| CFNIH1_RS06020 () | 1258161..1258508 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| CFNIH1_RS06025 () | 1258502..1259341 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| CFNIH1_RS06030 () | 1259746..1261287 | + | 1542 | WP_000050481.1 | IS91 family transposase ISVsa3 | Transposase |
| CFNIH1_RS26430 () | 1261384..1261806 | + | 423 | Protein_1187 | IS91 family transposase ISVsa3 | Transposase |
| CFNIH1_RS06040 () | 1262072..1262572 | + | 501 | WP_002008781.1 | hypothetical protein | - |
| CFNIH1_RS06045 () | 1262572..1263141 | + | 570 | WP_000019304.1 | Dihydrofolate reductase | ARG |
| CFNIH1_RS28190 () | 1263542..1263757 | + | 216 | Protein_1190 | hypothetical protein | - |
| CFNIH1_RS06055 () | 1263744..1264757 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| CFNIH1_RS06060 () | 1264967..1265797 | + | 831 | WP_001334766.1 | Beta-lactamase OXA-1 | ARG |
| CFNIH1_RS06065 () | 1265910..1266701 | + | 792 | WP_001209508.1 | Streptomycin 3''-adenylyltransferase | ARG |
| CFNIH1_RS06070 () | 1266837..1267534 | + | 698 | Protein_1194 | IS1 family transposase IS1R | Transposase |
| CFNIH1_RS06075 () | 1267531..1267980 | + | 450 | WP_080700391.1 | hypothetical protein | - |
| CFNIH1_RS27920 () | 1268100..1268273 | + | 174 | WP_000088744.1 | DUF905 family protein | - |
| CFNIH1_RS06080 () | 1268373..1269194 | + | 822 | WP_038635526.1 | DUF945 domain-containing protein | - |
| CFNIH1_RS06085 () | 1269194..1269439 | + | 246 | WP_000680586.1 | hypothetical protein | - |
| CFNIH1_RS06090 () | 1269533..1270006 | + | 474 | WP_000855059.1 | antirestriction protein | - |
| CFNIH1_RS06095 () | 1270022..1270498 | + | 477 | WP_001186768.1 | RadC family protein | - |
| CFNIH1_RS06100 () | 1270567..1270788 | + | 222 | WP_000692306.1 | DUF987 domain-containing protein | - |
| CFNIH1_RS06105 () | 1270917..1271240 | + | 324 | WP_155268626.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| CFNIH1_RS06110 () | 1271287..1271664 | + | 378 | WP_038635535.1 | TA system toxin CbtA family protein | Toxin Detail |
| CFNIH1_RS06115 () | 1271661..1272149 | + | 489 | WP_038635538.1 | hypothetical protein | - |
| CFNIH1_RS06120 () | 1272116..1272358 | + | 243 | WP_012777794.1 | DUF957 domain-containing protein | - |
| CFNIH1_RS06125 () | 1272443..1272631 | + | 189 | Protein_1206 | restriction endonuclease subunit M | - |
| CFNIH1_RS06130 () | 1272826..1274367 | + | 1542 | Protein_1207 | IS21 family transposase ISEc12 | Transposase |
| CFNIH1_RS06135 () | 1274382..1275128 | + | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| CFNIH1_RS06140 () | 1275210..1275590 | + | 381 | Protein_1209 | DUF4942 domain-containing protein | - |
| CFNIH1_RS06145 () | 1275662..1276666 | + | 1005 | WP_001179707.1 | IS110 family transposase ISSfl8 | Transposase |
| CFNIH1_RS06150 () | 1276969..1277232 | + | 264 | Protein_1211 | DUF4942 domain-containing protein | - |
| CFNIH1_RS06155 () | 1277471..1278097 | + | 627 | WP_051594495.1 | hypothetical protein | - |
| CFNIH1_RS06160 () | 1278094..1278285 | - | 192 | WP_038635544.1 | toxin-antitoxin system HicB family antitoxin | - |
| CFNIH1_RS06165 () | 1278412..1278702 | + | 291 | WP_038635547.1 | SymE family type I addiction module toxin | - |
| CFNIH1_RS06170 () | 1278877..1279137 | + | 261 | WP_038635550.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| CFNIH1_RS26455 () | 1279141..1279443 | + | 303 | WP_071888055.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CFNIH1_RS06175 () | 1279632..1282436 | - | 2805 | WP_038635552.1 | intestinal colonization autotransporter adhesin MisL | - |
| CFNIH1_RS06180 () | 1282511..1283128 | - | 618 | WP_038635555.1 | helix-turn-helix transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|