MGE detailed information
MGE type: Prophage MGE length: 51972 bp
Accession: NZ_CP007539 Location: 1987003..2038974 Organism: Staphylococcus aureus strain FDAARGOS_5 Replicon: chromosome
Accession: NZ_CP007539 Location: 1987003..2038974 Organism: Staphylococcus aureus strain FDAARGOS_5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| X998_RS10415 () | 1982101..1982433 | - | 333 | WP_000731878.1 | glycine cleavage system protein H | - |
| X998_RS10420 () | 1982467..1983468 | - | 1002 | WP_000240058.1 | LLM class flavin-dependent oxidoreductase | - |
| X998_RS10425 () | 1983582..1983674 | - | 93 | WP_001801779.1 | hypothetical protein | - |
| X998_RS10430 () | 1983770..1984969 | + | 1200 | WP_000286484.1 | NADH-dependent flavin oxidoreductase | - |
| X998_RS10435 () | 1985042..1985869 | + | 828 | WP_000136020.1 | alpha/beta hydrolase | - |
| X998_RS10450 () | 1987003..1988457 | - | 1455 | WP_000930258.1 | N-acetylmuramoyl-L-alanine amidase | - |
| X998_RS10455 () | 1988469..1988771 | - | 303 | WP_000339146.1 | phage holin | - |
| X998_RS10460 () | 1988907..1989206 | - | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| X998_RS10465 () | 1989252..1989416 | - | 165 | WP_001125229.1 | XkdX family protein | - |
| X998_RS10470 () | 1989409..1989798 | - | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| X998_RS10475 () | 1989798..1991264 | - | 1467 | WP_000067122.1 | BppU family phage baseplate upper protein | - |
| X998_RS10480 () | 1991264..1993174 | - | 1911 | WP_000429557.1 | hypothetical protein | - |
| X998_RS10485 () | 1993190..1993480 | - | 291 | WP_000179858.1 | hypothetical protein | - |
| X998_RS10490 () | 1993480..1995063 | - | 1584 | WP_000384474.1 | prophage endopeptidase tail family protein | - |
| X998_RS10495 () | 1995072..1995896 | - | 825 | WP_001190533.1 | phage tail family protein | - |
| X998_RS10500 () | 1995896..2002096 | - | 6201 | WP_001003428.1 | phage tail tape measure protein | - |
| X998_RS10505 () | 2002110..2002268 | - | 159 | WP_000438833.1 | hypothetical protein | - |
| X998_RS10510 () | 2002310..2002660 | - | 351 | WP_000589167.1 | hypothetical protein | - |
| X998_RS10515 () | 2002718..2003173 | - | 456 | WP_000169127.1 | Ig domain-containing protein | - |
| X998_RS10520 () | 2003265..2003906 | - | 642 | WP_000807536.1 | tail protein | - |
| X998_RS10525 () | 2003941..2004336 | - | 396 | WP_001023806.1 | DUF3168 domain-containing protein | - |
| X998_RS10530 () | 2004337..2004738 | - | 402 | WP_000110023.1 | hypothetical protein | - |
| X998_RS10535 () | 2004735..2005067 | - | 333 | WP_000395498.1 | hypothetical protein | - |
| X998_RS10540 () | 2005079..2005357 | - | 279 | WP_000050973.1 | head-tail connector protein | - |
| X998_RS10545 () | 2005426..2006589 | - | 1164 | WP_001142734.1 | phage major capsid protein | - |
| X998_RS10550 () | 2006601..2007374 | - | 774 | WP_000061866.1 | Clp protease ClpP | - |
| X998_RS10555 () | 2007358..2008596 | - | 1239 | WP_001100669.1 | phage portal protein | - |
| X998_RS10560 () | 2008601..2010292 | - | 1692 | WP_000153555.1 | terminase large subunit | - |
| X998_RS10565 () | 2010282..2010587 | - | 306 | WP_000778932.1 | P27 family phage terminase small subunit | - |
| X998_RS10570 () | 2010716..2011030 | - | 315 | WP_000160689.1 | HNH endonuclease | - |
| X998_RS10575 () | 2011187..2011624 | - | 438 | WP_000513702.1 | transcriptional regulator | - |
| X998_RS10580 () | 2011637..2011960 | - | 324 | Protein_1947 | ATP-dependent helicase | - |
| X998_RS10585 () | 2011944..2012144 | - | 201 | WP_000265258.1 | DUF1514 family protein | - |
| X998_RS10590 () | 2012212..2012364 | - | 153 | WP_000166078.1 | transcriptional activator RinB | - |
| X998_RS10595 () | 2012357..2012560 | - | 204 | WP_001072795.1 | hypothetical protein | - |
| X998_RS10600 () | 2012557..2012751 | - | 195 | WP_000141183.1 | hypothetical protein | - |
| X998_RS10605 () | 2012748..2012954 | - | 207 | WP_000195770.1 | DUF1381 domain-containing protein | - |
| X998_RS10610 () | 2012991..2013533 | - | 543 | WP_000185654.1 | dUTP pyrophosphatase | - |
| X998_RS10615 () | 2013538..2013774 | - | 237 | WP_001065023.1 | DUF1024 family protein | - |
| X998_RS10620 () | 2013767..2014075 | - | 309 | WP_000144708.1 | hypothetical protein | - |
| X998_RS10625 () | 2014072..2014419 | - | 348 | WP_000979209.1 | hypothetical protein | - |
| X998_RS10630 () | 2014416..2014817 | - | 402 | WP_000695759.1 | hypothetical protein | - |
| X998_RS10635 () | 2014820..2015026 | - | 207 | WP_000693987.1 | hypothetical protein | - |
| X998_RS10640 () | 2015040..2015282 | - | 243 | WP_000132205.1 | hypothetical protein | - |
| X998_RS10645 () | 2015286..2015642 | - | 357 | WP_000029384.1 | hypothetical protein | - |
| X998_RS10650 () | 2015654..2015911 | - | 258 | WP_000772916.1 | helix-turn-helix transcriptional regulator | - |
| X998_RS10655 () | 2015912..2016097 | - | 186 | WP_001187232.1 | DUF3113 family protein | - |
| X998_RS10660 () | 2016102..2016506 | - | 405 | WP_000049810.1 | DUF1064 domain-containing protein | - |
| X998_RS10665 () | 2016503..2016928 | - | 426 | WP_000451862.1 | DNA N-6-adenine-methyltransferase | - |
| X998_RS10670 () | 2016938..2017159 | - | 222 | WP_001123688.1 | DUF3269 family protein | - |
| X998_RS10675 () | 2017162..2017377 | - | 216 | WP_001095146.1 | hypothetical protein | - |
| X998_RS10680 () | 2017374..2018615 | - | 1242 | WP_001106168.1 | AAA family ATPase | - |
| X998_RS10685 () | 2018612..2018968 | - | 357 | WP_001132238.1 | hypothetical protein | - |
| X998_RS10690 () | 2018968..2019768 | - | 801 | WP_000504976.1 | phage replisome organizer N-terminal domain-containing protein | - |
| X998_RS10695 () | 2019740..2020435 | - | 696 | WP_001124444.1 | hypothetical protein | - |
| X998_RS10700 () | 2020449..2020868 | - | 420 | WP_000934777.1 | single-stranded DNA-binding protein | - |
| X998_RS10705 () | 2020868..2021491 | - | 624 | WP_000139722.1 | DUF1071 domain-containing protein | - |
| X998_RS10710 () | 2021484..2021705 | - | 222 | WP_000815401.1 | DUF2483 family protein | - |
| X998_RS10715 () | 2021715..2021975 | - | 261 | WP_001556704.1 | DUF1108 family protein | - |
| X998_RS10720 () | 2021980..2022297 | - | 318 | WP_001097093.1 | hypothetical protein | - |
| X998_RS10725 () | 2022387..2022548 | - | 162 | WP_001285962.1 | DUF1270 domain-containing protein | - |
| X998_RS10730 () | 2022561..2022824 | - | 264 | WP_001124196.1 | helix-turn-helix domain-containing protein | - |
| X998_RS10735 () | 2022879..2023130 | + | 252 | WP_000801109.1 | hypothetical protein | - |
| X998_RS10740 () | 2023108..2023299 | - | 192 | WP_000389907.1 | hypothetical protein | - |
| X998_RS10745 () | 2023347..2023727 | + | 381 | WP_000773060.1 | DUF2513 domain-containing protein | - |
| X998_RS10750 () | 2023714..2023911 | - | 198 | WP_031903992.1 | hypothetical protein | - |
| X998_RS10755 () | 2023968..2024333 | + | 366 | WP_001128433.1 | hypothetical protein | Antitoxin Detail |
| X998_RS10760 () | 2024302..2024547 | - | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| X998_RS10765 () | 2024587..2024811 | - | 225 | WP_000187184.1 | hypothetical protein | - |
| X998_RS10770 () | 2024812..2025603 | - | 792 | WP_001148570.1 | phage antirepressor KilAC domain-containing protein | - |
| X998_RS10775 () | 2025760..2026068 | - | 309 | WP_001153965.1 | hypothetical protein | - |
| X998_RS10780 () | 2026083..2026301 | - | 219 | WP_001198674.1 | helix-turn-helix domain-containing protein | - |
| X998_RS10785 () | 2026443..2027162 | + | 720 | WP_000358220.1 | XRE family transcriptional regulator | - |
| X998_RS10790 () | 2027362..2027544 | + | 183 | WP_000705240.1 | hypothetical protein | - |
| X998_RS10795 () | 2027622..2028335 | + | 714 | WP_001582614.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| X998_RS10800 () | 2028529..2029734 | + | 1206 | WP_000264187.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| X998_RS10805 () | 2029828..2031759 | - | 1932 | Protein_1992 | Lipase 2 | VF |
| X998_RS10810 () | 2032177..2033490 | + | 1314 | WP_001077722.1 | YjiH family protein | - |
| X998_RS10815 () | 2033617..2034285 | - | 669 | WP_000936720.1 | N-acetylmannosamine-6-phosphate 2-epimerase | - |
| X998_RS10820 () | 2034425..2035225 | + | 801 | WP_000667382.1 | MurR/RpiR family transcriptional regulator | - |
| X998_RS10825 () | 2035503..2036363 | - | 861 | WP_000291445.1 | ROK family protein | - |
| X998_RS10830 () | 2036521..2037402 | + | 882 | WP_001030738.1 | N-acetylneuraminate lyase | - |
| X998_RS10835 () | 2037442..2038974 | + | 1533 | WP_000665736.1 | sodium:solute symporter | - |
| X998_RS10840 () | 2039079..2040299 | - | 1221 | WP_001022961.1 | NupC/NupG family nucleoside CNT transporter | - |
| X998_RS10845 () | 2040310..2041233 | - | 924 | WP_000002068.1 | pseudouridine-5'-phosphate glycosidase | - |
| X998_RS10850 () | 2041208..2042326 | - | 1119 | WP_001283977.1 | winged helix-turn-helix transcriptional regulator | - |
| X998_RS10855 () | 2042669..2043700 | - | 1032 | WP_000364857.1 | PTS sugar transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|