MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 103466 bp
Accession: NZ_CP007499 Location: 364134..467599 Organism: Staphylococcus aureus strain 2395 USA500 Replicon: chromosome
Accession: NZ_CP007499 Location: 364134..467599 Organism: Staphylococcus aureus strain 2395 USA500 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CH51_RS01620 () | 359162..359494 | + | 333 | WP_000731878.1 | glycine cleavage system protein H | - |
| CH51_RS01625 () | 359495..360295 | + | 801 | WP_000449061.1 | protein-ADP-ribose hydrolase | - |
| CH51_RS01630 () | 360285..361229 | + | 945 | WP_001191946.1 | NAD-dependent deacetylase | - |
| CH51_RS01635 () | 361207..362229 | + | 1023 | WP_000280803.1 | lipoate--protein ligase | - |
| CH51_RS01640 () | 362544..363569 | + | 1026 | WP_001060912.1 | aldehyde reductase | - |
| CH51_RS01645 () | 363662..365008 | - | 1347 | WP_001147970.1 | PTS ascorbate transporter subunit IIC | - |
| CH51_RS01650 () | 365023..365307 | - | 285 | WP_000699538.1 | PTS sugar transporter subunit IIB | - |
| CH51_RS01655 () | 365309..365752 | - | 444 | WP_000050762.1 | PTS sugar transporter subunit IIA | - |
| CH51_RS01660 () | 365757..367712 | - | 1956 | WP_000954261.1 | BglG family transcription antiterminator | - |
| CH51_RS01665 () | 367924..368343 | + | 420 | WP_000397416.1 | multidrug efflux transporter transcriptional repressor MepR | - |
| CH51_RS01670 () | 368450..369805 | + | 1356 | WP_000651060.1 | multidrug efflux MATE transporter MepA | - |
| CH51_RS01675 () | 369910..370350 | + | 441 | WP_000335332.1 | MepB family protein | - |
| CH51_RS01680 () | 370433..371791 | - | 1359 | WP_001010111.1 | hypothetical protein | VF |
| CH51_RS01685 () | 372099..373025 | + | 927 | WP_001028221.1 | VOC family protein | - |
| CH51_RS01690 () | 373039..374100 | + | 1062 | WP_001096116.1 | LLM class flavin-dependent oxidoreductase | - |
| CH51_RS01695 () | 374114..374680 | + | 567 | WP_001028431.1 | NAD(P)H-dependent oxidoreductase | - |
| CH51_RS01700 () | 374740..375735 | - | 996 | WP_000157641.1 | YeiH family protein | - |
| CH51_RS01705 () | 375833..376129 | + | 297 | WP_010956542.1 | hypothetical protein | - |
| CH51_RS01710 () | 376209..376754 | + | 546 | WP_000467652.1 | GNAT family N-acetyltransferase | - |
| CH51_RS01715 () | 377022..377876 | + | 855 | WP_000737196.1 | EfeM/EfeO family lipoprotein | - |
| CH51_RS01720 () | 377873..379102 | + | 1230 | WP_000186217.1 | deferrochelatase/peroxidase EfeB | - |
| CH51_RS01725 () | 379083..380795 | + | 1713 | WP_000683699.1 | FTR1 family protein | - |
| CH51_RS01730 () | 380887..381588 | - | 702 | WP_001795631.1 | twin-arginine translocase subunit TatC | - |
| CH51_RS01735 () | 381605..381829 | - | 225 | WP_001794540.1 | twin-arginine translocase TatA/TatE family subunit | - |
| CH51_RS01740 () | 381929..382318 | - | 390 | WP_000886005.1 | DUF1398 family protein | - |
| CH51_RS01745 () | 382559..382762 | + | 204 | WP_001246013.1 | hypothetical protein | VF |
| CH51_RS01750 () | 382759..383472 | + | 714 | WP_000698752.1 | DUF3169 family protein | - |
| CH51_RS01755 () | 383497..384339 | + | 843 | WP_000209565.1 | ABC transporter ATP-binding protein | - |
| CH51_RS01760 () | 384339..384968 | + | 630 | WP_000677714.1 | ABC-2 transporter permease | - |
| CH51_RS01765 () | 385335..386468 | - | 1134 | WP_000245700.1 | low temperature requirement protein A | - |
| CH51_RS01775 () | 387007..388188 | + | 1182 | WP_000199070.1 | acetyl-CoA C-acetyltransferase | - |
| CH51_RS01780 () | 388271..389023 | - | 753 | WP_000195907.1 | cyclase family protein | - |
| CH51_RS01785 () | 389066..391294 | - | 2229 | WP_000207614.1 | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase | - |
| CH51_RS01790 () | 391291..393132 | - | 1842 | WP_000077328.1 | bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase | - |
| CH51_RS01795 () | 393101..394261 | - | 1161 | WP_000175846.1 | PLP-dependent aspartate aminotransferase family protein | - |
| CH51_RS01800 () | 394258..395361 | - | 1104 | WP_000655692.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| CH51_RS01805 () | 396025..396870 | + | 846 | WP_001550052.1 | ParB/RepB/Spo0J family partition protein | - |
| CH51_RS01810 () | 397027..397908 | + | 882 | WP_001077602.1 | mechanosensitive ion channel family protein | - |
| CH51_RS01815 () | 397938..398141 | + | 204 | WP_000157345.1 | DUF951 domain-containing protein | - |
| CH51_RS01820 () | 398153..399250 | + | 1098 | WP_001218732.1 | redox-regulated ATPase YchF | - |
| CH51_RS01825 () | 399336..399527 | - | 192 | WP_001052483.1 | hypothetical protein | - |
| CH51_RS01830 () | 399771..400067 | + | 297 | WP_001261460.1 | 30S ribosomal protein S6 | - |
| CH51_RS01835 () | 400088..400591 | + | 504 | WP_000934799.1 | single-stranded DNA-binding protein | - |
| CH51_RS01840 () | 400643..400885 | + | 243 | WP_000897044.1 | 30S ribosomal protein S18 | - |
| CH51_RS01845 () | 401114..401911 | - | 798 | WP_000119675.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| CH51_RS01850 () | 401935..403149 | - | 1215 | WP_000270128.1 | hypothetical protein ; Integrase | Integrase |
| CH51_RS01855 () | 403448..404182 | - | 735 | WP_000142630.1 | helix-turn-helix domain-containing protein | - |
| CH51_RS01860 () | 404332..404544 | + | 213 | WP_001063623.1 | helix-turn-helix transcriptional regulator | - |
| CH51_RS01865 () | 404545..404817 | + | 273 | WP_001138303.1 | helix-turn-helix domain-containing protein | - |
| CH51_RS01870 () | 404829..404975 | + | 147 | WP_000784873.1 | hypothetical protein | - |
| CH51_RS01875 () | 404968..405177 | + | 210 | WP_001058494.1 | hypothetical protein | Antitoxin Detail |
| CH51_RS01880 () | 405180..405494 | + | 315 | WP_001103949.1 | DUF1474 family protein | Toxin Detail |
| CH51_RS01885 () | 405565..407817 | + | 2253 | WP_000974924.1 | DNA primase | - |
| CH51_RS01890 () | 408088..408432 | + | 345 | WP_000567971.1 | hypothetical protein | - |
| CH51_RS01895 () | 408434..409075 | + | 642 | WP_001019274.1 | hypothetical protein | - |
| CH51_RS01900 () | 409525..409866 | + | 342 | WP_001190606.1 | hypothetical protein | - |
| CH51_RS01905 () | 409878..410456 | + | 579 | WP_000846280.1 | hypothetical protein | - |
| CH51_RS01910 () | 410474..410692 | + | 219 | WP_000448770.1 | capsid morphogenesis B protein | - |
| CH51_RS01915 () | 410743..411270 | + | 528 | WP_000771370.1 | spore coat protein | - |
| CH51_RS01920 () | 411273..411614 | + | 342 | WP_000358778.1 | hypothetical protein | - |
| CH51_RS01925 () | 411611..412180 | + | 570 | WP_001293077.1 | terminase small subunit | - |
| CH51_RS16345 () | 412455..412625 | + | 171 | WP_000022954.1 | hypothetical protein | - |
| CH51_RS15645 () | 412936..413217 | + | 282 | WP_001577971.1 | hypothetical protein | - |
| CH51_RS01945 () | 413335..413847 | + | 513 | WP_000813311.1 | hypothetical protein | - |
| CH51_RS01955 () | 414646..415584 | - | 939 | WP_001822249.1 | Abi family protein | - |
| CH51_RS16590 () | 415623..416330 | - | 708 | Protein_378 | tyrosine-type recombinase/integrase | - |
| CH51_RS01970 () | 416530..417141 | + | 612 | WP_000475326.1 | toxin | - |
| CH51_RS01975 () | 417510..417878 | + | 369 | WP_000849177.1 | YxeA family protein | - |
| CH51_RS01980 () | 418059..418631 | + | 573 | WP_000769721.1 | PepSY domain-containing protein | - |
| CH51_RS01985 () | 418769..419032 | - | 264 | WP_001055897.1 | helix-turn-helix domain-containing protein | - |
| CH51_RS01990 () | 419332..419583 | + | 252 | WP_000466748.1 | GlsB/YeaQ/YmgE family stress response membrane protein | - |
| CH51_RS01995 () | 419622..419831 | - | 210 | WP_000211676.1 | hypothetical protein | - |
| CH51_RS02000 () | 420009..420590 | + | 582 | WP_000158374.1 | phosphoglycerate mutase family protein | - |
| CH51_RS02005 () | 420656..421039 | - | 384 | WP_000868248.1 | hypothetical protein | - |
| CH51_RS02010 () | 421294..421920 | - | 627 | WP_000746687.1 | NDxxF motif lipoprotein | - |
| CH51_RS02015 () | 421993..422235 | - | 243 | Protein_388 | hypothetical protein | - |
| CH51_RS02020 () | 422365..423888 | - | 1524 | WP_000930486.1 | alkyl hydroperoxide reductase subunit F | - |
| CH51_RS02025 () | 423904..424473 | - | 570 | WP_000052781.1 | peroxiredoxin | - |
| CH51_RS02030 () | 424965..425720 | + | 756 | WP_001289311.1 | NADPH-dependent oxidoreductase | - |
| CH51_RS02035 () | 425801..427189 | - | 1389 | WP_000991007.1 | L-cystine transporter | - |
| CH51_RS02040 () | 427274..427375 | + | 102 | WP_001789518.1 | hypothetical protein | - |
| CH51_RS02045 () | 428166..429122 | - | 957 | WP_000956132.1 | hypothetical protein | - |
| CH51_RS02050 () | 429240..429902 | - | 663 | WP_000394698.1 | hypothetical protein | - |
| CH51_RS02055 () | 430045..430452 | - | 408 | WP_000763768.1 | general stress protein | - |
| CH51_RS02060 () | 430965..431543 | + | 579 | WP_000421410.1 | xanthine phosphoribosyltransferase | - |
| CH51_RS02065 () | 431543..432811 | + | 1269 | WP_000793009.1 | purine permease | - |
| CH51_RS02070 () | 432849..434315 | + | 1467 | WP_000264071.1 | IMP dehydrogenase | - |
| CH51_RS02075 () | 434340..435881 | + | 1542 | WP_000424966.1 | glutamine-hydrolyzing GMP synthase | - |
| CH51_RS02080 () | 435949..437142 | - | 1194 | WP_000237797.1 | hypothetical protein ; Integrase | Integrase |
| CH51_RS02085 () | 437169..437369 | - | 201 | WP_000633907.1 | DUF3173 family protein | - |
| CH51_RS02090 () | 437867..438097 | - | 231 | WP_000845143.1 | helix-turn-helix domain-containing protein | - |
| CH51_RS02095 () | 438094..438516 | - | 423 | WP_000804879.1 | sigma-70 family RNA polymerase sigma factor | - |
| CH51_RS16570 () | 438473..438660 | - | 188 | Protein_405 | hypothetical protein | - |
| CH51_RS02100 () | 439047..439400 | + | 354 | WP_001227350.1 | helix-turn-helix domain-containing protein | - |
| CH51_RS15665 () | 439458..439646 | - | 189 | WP_032506803.1 | cysteine-rich KTR domain-containing protein | - |
| CH51_RS02105 () | 439744..441663 | - | 1920 | WP_000691738.1 | hypothetical protein | VF |
| CH51_RS15670 () | 441679..441795 | - | 117 | WP_001791010.1 | tetracycline resistance determinant leader peptide | - |
| CH51_RS02110 () | 442040..442969 | - | 930 | WP_000584386.1 | conjugal transfer protein | - |
| CH51_RS02115 () | 442986..444008 | - | 1023 | WP_000768372.1 | hypothetical protein | VF |
| CH51_RS02120 () | 444005..446032 | - | 2028 | WP_000192392.1 | membrane protein | - |
| CH51_RS02125 () | 446029..448482 | - | 2454 | WP_000331165.1 | ATP-binding protein | - |
| CH51_RS02130 () | 448466..448861 | - | 396 | WP_000723887.1 | conjugal transfer protein | - |
| CH51_RS02135 () | 448933..449571 | - | 639 | WP_000248477.1 | hypothetical protein | - |
| CH51_RS02140 () | 449627..450121 | - | 495 | WP_162472447.1 | antirestriction protein ArdA | - |
| CH51_RS02145 () | 450188..450967 | - | 780 | WP_000675717.1 | abortive infection family protein | - |
| CH51_RS02150 () | 451009..451230 | - | 222 | WP_001009054.1 | hypothetical protein | - |
| CH51_RS02155 () | 451227..451517 | - | 291 | WP_000055376.1 | hypothetical protein | - |
| CH51_RS02160 () | 451514..452698 | - | 1185 | WP_000426689.1 | replication initiation factor domain-containing protein | - |
| CH51_RS02165 () | 452880..454283 | - | 1404 | WP_001130244.1 | DUF87 domain-containing protein | - |
| CH51_RS02170 () | 454305..455078 | - | 774 | WP_000185761.1 | hypothetical protein | - |
| CH51_RS02175 () | 455088..455465 | - | 378 | WP_001234191.1 | YdcP family protein | - |
| CH51_RS02180 () | 455486..455800 | - | 315 | WP_000421279.1 | YdcP family protein | - |
| CH51_RS02185 () | 456000..457793 | - | 1794 | WP_000181735.1 | ATP-dependent helicase | - |
| CH51_RS02190 () | 457790..459979 | - | 2190 | WP_000470931.1 | AAA family ATPase | - |
| CH51_RS02195 () | 460113..461303 | - | 1191 | WP_000997693.1 | IS256 family transposase ISLgar5 | Transposase |
| CH51_RS02200 () | 461797..462333 | - | 537 | WP_000551776.1 | hypothetical protein | - |
| CH51_RS02205 () | 462890..464251 | + | 1362 | WP_001549130.1 | ISL3 family transposase IS1181 | Transposase |
| CH51_RS02210 () | 464234..464950 | - | 717 | WP_000041885.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| CH51_RS02215 () | 465349..465621 | - | 273 | WP_000159787.1 | IS3 family transposase IS655 | Transposase |
| CH51_RS02220 () | 465882..466034 | - | 153 | WP_000248839.1 | hypothetical protein | - |
| CH51_RS02225 () | 466558..466917 | - | 360 | WP_001021622.1 | DUF1304 domain-containing protein | - |
| CH51_RS02230 () | 466936..467781 | - | 846 | WP_001024377.1 | SDR family oxidoreductase | - |
| CH51_RS02235 () | 468253..468933 | + | 681 | WP_000669005.1 | superantigen-like protein SSL1 | - |
| CH51_RS02240 () | 469219..469914 | + | 696 | WP_000782618.1 | superantigen-like protein SSL2 | - |
| CH51_RS02245 () | 470205..470882 | + | 678 | Protein_437 | superantigen-like protein | - |
| CH51_RS02250 () | 470982..472154 | + | 1173 | WP_000195429.1 | IS256-like element IS256 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|