MGE detailed information
MGE type: Genomic_island MGE length: 12427 bp
Accession: NZ_CP007448 Location: 1345062..1357488 Organism: Yersinia enterocolitica LC20 Replicon: chromosome
Accession: NZ_CP007448 Location: 1345062..1357488 Organism: Yersinia enterocolitica LC20 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LC20_RS06410 () | 1340485..1341870 | + | 1386 | WP_025377482.1 | cysteine--tRNA ligase | - |
| LC20_RS06415 () | 1341997..1342209 | - | 213 | WP_005182436.1 | ribosome-associated protein YbcJ | - |
| LC20_RS06420 () | 1342209..1343090 | - | 882 | WP_025377483.1 | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD | - |
| LC20_RS06430 () | 1343396..1344451 | - | 1056 | WP_087769690.1 | site-specific integrase | - |
| LC20_RS06435 () | 1344511..1344750 | - | 240 | Protein_1244 | hypothetical protein | - |
| LC20_RS06440 () | 1345062..1345430 | - | 369 | WP_025377486.1 | hypothetical protein | - |
| LC20_RS06445 () | 1345427..1345651 | - | 225 | WP_087769691.1 | hypothetical protein | - |
| LC20_RS06450 () | 1345788..1346036 | - | 249 | WP_025377487.1 | hypothetical protein | - |
| LC20_RS06455 () | 1346250..1346792 | + | 543 | Protein_1248 | Hemolysin transporter protein ShlB | VF |
| LC20_RS06460 () | 1347028..1347759 | + | 732 | WP_087769693.1 | hemagglutinin repeat-containing protein | - |
| LC20_RS06465 () | 1347973..1348329 | + | 357 | WP_025377490.1 | hypothetical protein | - |
| LC20_RS06470 () | 1348337..1348642 | + | 306 | WP_025377491.1 | hypothetical protein | - |
| LC20_RS06475 () | 1349204..1349527 | + | 324 | WP_087769706.1 | TA system toxin CbtA family protein | Toxin Detail |
| LC20_RS06480 () | 1349599..1349943 | + | 345 | WP_025377492.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| LC20_RS06485 () | 1350029..1350883 | + | 855 | WP_025377493.1 | DUF4942 domain-containing protein | - |
| LC20_RS06495 () | 1351731..1352057 | - | 327 | WP_025377494.1 | DUF1493 family protein | - |
| LC20_RS06500 () | 1352182..1352318 | - | 137 | Protein_1256 | transposase | - |
| LC20_RS06505 () | 1352456..1353634 | - | 1179 | WP_140414465.1 | hypothetical protein | - |
| LC20_RS06510 () | 1353930..1354133 | + | 204 | WP_025377496.1 | hypothetical protein | - |
| LC20_RS06515 () | 1354130..1354540 | + | 411 | WP_025377497.1 | hypothetical protein | VF |
| LC20_RS06530 () | 1356724..1357488 | + | 765 | WP_087769617.1 | winged helix-turn-helix domain-containing protein | - |
| LC20_RS06535 () | 1357702..1358205 | - | 504 | WP_025377499.1 | lytic transglycosylase domain-containing protein | - |
| LC20_RS06540 () | 1358251..1358607 | - | 357 | WP_025377500.1 | hypothetical protein | - |
| LC20_RS06545 () | 1358600..1359280 | - | 681 | WP_025377501.1 | hypothetical protein | - |
| LC20_RS06550 () | 1359261..1359815 | - | 555 | WP_025377502.1 | type III secretion protein | - |
| LC20_RS06555 () | 1359812..1360582 | - | 771 | WP_025377503.1 | type III secretion inner membrane ring lipoprotein SctJ | - |
| LC20_RS06560 () | 1360582..1360905 | - | 324 | WP_025377504.1 | type III secretion system inner rod subunit SctI | - |
| LC20_RS06565 () | 1360956..1361219 | - | 264 | WP_025377505.1 | type III secretion system needle filament subunit SctF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|