MGE detailed information
MGE type: Genomic_island MGE length: 17277 bp
Accession: NZ_CP007410 Location: 4772193..4789469 Organism: Pseudomonas brassicacearum strain DF41 Replicon: chromosome
Accession: NZ_CP007410 Location: 4772193..4789469 Organism: Pseudomonas brassicacearum strain DF41 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CD58_RS20170 () | 4769708..4770958 | - | 1251 | WP_025211138.1 | IS256 family transposase | - |
| CD58_RS20175 () | 4771497..4771775 | + | 279 | WP_025214790.1 | hypothetical protein | - |
| CD58_RS20180 () | 4772193..4772696 | - | 504 | WP_025214791.1 | GNAT family N-acetyltransferase | - |
| CD58_RS20185 () | 4773256..4773879 | - | 624 | WP_025214792.1 | SMI1/KNR4 family protein | - |
| CD58_RS20190 () | 4773970..4774785 | - | 816 | WP_025214793.1 | suppressor of fused domain protein | - |
| CD58_RS20195 () | 4774782..4775879 | - | 1098 | WP_025214794.1 | sterol desaturase family protein | - |
| CD58_RS20200 () | 4775939..4776658 | - | 720 | WP_025214795.1 | hypothetical protein | - |
| CD58_RS20205 () | 4776843..4777664 | - | 822 | WP_025214796.1 | diaminopimelate epimerase | - |
| CD58_RS20210 () | 4777734..4778288 | - | 555 | WP_025214797.1 | GNAT family N-acetyltransferase | - |
| CD58_RS20215 () | 4778367..4779137 | - | 771 | WP_025214798.1 | Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE | VF |
| CD58_RS20220 () | 4779205..4779843 | - | 639 | WP_025214799.1 | XRE family transcriptional regulator | - |
| CD58_RS20225 () | 4779840..4780172 | - | 333 | WP_025214800.1 | type II toxin-antitoxin system HigB family toxin | - |
| CD58_RS20230 () | 4780330..4781286 | - | 957 | WP_025214801.1 | 2-hydroxyacid dehydrogenase | - |
| CD58_RS20235 () | 4781319..4782077 | - | 759 | WP_025214802.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| CD58_RS20240 () | 4782120..4782812 | - | 693 | WP_025214803.1 | fumarylacetoacetate hydrolase family protein | - |
| CD58_RS20245 () | 4782914..4784263 | - | 1350 | WP_025214804.1 | MFS transporter | - |
| CD58_RS20250 () | 4784818..4785753 | + | 936 | WP_025214805.1 | HTH-type transcriptional activator RhaR | VF |
| CD58_RS20255 () | 4785828..4786301 | + | 474 | WP_025214806.1 | GNAT family N-acetyltransferase | - |
| CD58_RS20260 () | 4786319..4786546 | - | 228 | WP_025214807.1 | integrase | - |
| CD58_RS20265 () | 4786758..4787579 | + | 822 | WP_025214808.1 | DUF1206 domain-containing protein | - |
| CD58_RS20270 () | 4787581..4788072 | - | 492 | WP_025214809.1 | nuclear transport factor 2 family protein | - |
| CD58_RS20275 () | 4788703..4788990 | + | 288 | WP_038436701.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| CD58_RS20280 () | 4788981..4789469 | + | 489 | WP_025214811.1 | hypothetical protein | Toxin Detail |
| CD58_RS20290 () | 4790001..4790690 | + | 690 | WP_025214812.1 | crotonase/enoyl-CoA hydratase family protein | - |
| CD58_RS20295 () | 4790906..4791628 | + | 723 | WP_025214813.1 | 1-acylglycerol-3-phosphate O-acyltransferase | - |
| CD58_RS20300 () | 4791764..4792735 | + | 972 | WP_025214814.1 | magnesium and cobalt transport protein CorA | - |
| CD58_RS20305 () | 4792839..4793573 | - | 735 | WP_025214815.1 | amidotransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|