MGE detailed information
MGE type: Prophage MGE length: 94896 bp
Accession: NZ_CP007394 Location: 2098022..2192917 Organism: Escherichia coli strain ST2747 Replicon: chromosome
Accession: NZ_CP007394 Location: 2098022..2192917 Organism: Escherichia coli strain ST2747 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CF60_RS10090 () | 2094074..2095056 | + | 983 | Protein_1881 | zinc transporter ZntB | - |
| CF60_RS10100 () | 2095533..2096906 | + | 1374 | WP_001599773.1 | ATP-dependent RNA helicase DbpA | - |
| CF60_RS10105 () | 2097035..2097970 | - | 936 | WP_001157407.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| CF60_RS25795 () | 2098022..2099257 | - | 1236 | WP_001516465.1 | Putative defective protein IntQ ; Integrase | Integrase |
| CF60_RS10115 () | 2099259..2099474 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| CF60_RS10120 () | 2099574..2099762 | - | 189 | WP_001605349.1 | DUF1187 family protein | - |
| - () | 2099578..2099756 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2099578..2099756 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2099578..2099756 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2099578..2099756 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| CF60_RS10125 () | 2099755..2099949 | - | 195 | WP_032159264.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| CF60_RS10130 () | 2100013..2101065 | - | 1053 | WP_001004422.1 | recombinase RecT | - |
| CF60_RS10135 () | 2101077..2104148 | - | 3072 | WP_001605350.1 | exodeoxyribonuclease VIII | - |
| CF60_RS10140 () | 2104250..2104525 | - | 276 | WP_001344816.1 | hypothetical protein | - |
| CF60_RS10145 () | 2104600..2104770 | - | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| CF60_RS10150 () | 2104770..2104991 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| CF60_RS10155 () | 2105433..2105921 | + | 489 | WP_001312793.1 | superinfection exclusion protein B | - |
| CF60_RS24865 () | 2105918..2106073 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| CF60_RS27130 () | 2106084..2106263 | - | 180 | WP_001326317.1 | hypothetical protein | - |
| CF60_RS10160 () | 2106527..2107003 | - | 477 | WP_001551043.1 | DNA-binding transcriptional repressor RacR | - |
| CF60_RS10165 () | 2107127..2107423 | + | 297 | WP_001551044.1 | toxin YdaS | - |
| CF60_RS10170 () | 2107446..2107868 | + | 423 | WP_025210427.1 | hypothetical protein | - |
| CF60_RS10175 () | 2107946..2108734 | + | 789 | WP_001396581.1 | hypothetical protein | - |
| CF60_RS10180 () | 2108741..2109487 | + | 747 | WP_000788969.1 | ATP-binding protein | - |
| CF60_RS10185 () | 2109510..2110271 | + | 762 | WP_001605353.1 | DUF1627 domain-containing protein | - |
| CF60_RS10190 () | 2110287..2110709 | + | 423 | WP_001605354.1 | DUF977 family protein | - |
| CF60_RS27775 () | 2110870..2111214 | + | 345 | Protein_1903 | hypothetical protein | - |
| CF60_RS10205 () | 2111805..2112956 | + | 1152 | WP_001100703.1 | DNA cytosine methyltransferase | - |
| CF60_RS10210 () | 2112924..2113913 | - | 990 | WP_000016656.1 | hypothetical protein | - |
| CF60_RS10215 () | 2113913..2115304 | - | 1392 | WP_000138556.1 | ATP-binding protein | - |
| CF60_RS10220 () | 2115804..2116403 | + | 600 | WP_000940319.1 | DUF1367 family protein | - |
| CF60_RS10225 () | 2116403..2116693 | + | 291 | WP_001605357.1 | DUF1364 domain-containing protein | - |
| CF60_RS10230 () | 2116690..2117232 | + | 543 | WP_000640161.1 | DUF1133 family protein | - |
| CF60_RS10235 () | 2118277..2118705 | + | 429 | WP_000506936.1 | cell envelope integrity protein TolA | - |
| CF60_RS10240 () | 2118877..2119251 | + | 375 | WP_001348108.1 | hypothetical protein | - |
| CF60_RS10245 () | 2119503..2119718 | + | 216 | WP_000839565.1 | phage lysis protein EssD | - |
| CF60_RS10250 () | 2119718..2120215 | + | 498 | WP_001135310.1 | lysozyme RrrD | - |
| CF60_RS27140 () | 2120432..2120617 | + | 186 | WP_001228688.1 | prophage lysis lipoprotein RzoD | - |
| CF60_RS10260 () | 2120814..2122271 | + | 1458 | WP_001097895.1 | Trk system potassium transporter TrkG | - |
| CF60_RS10265 () | 2122409..2123200 | + | 792 | WP_025210428.1 | ParB/Srx family N-terminal domain-containing protein | - |
| CF60_RS10270 () | 2123193..2124125 | + | 933 | WP_001204037.1 | hypothetical protein | - |
| CF60_RS10275 () | 2124061..2124312 | + | 252 | WP_000613571.1 | hypothetical protein | - |
| CF60_RS10280 () | 2124316..2125410 | + | 1095 | WP_000089447.1 | terminase small subunit | - |
| CF60_RS10285 () | 2125391..2126692 | + | 1302 | WP_000625348.1 | terminase family protein | - |
| CF60_RS10290 () | 2126695..2128101 | + | 1407 | WP_000763704.1 | DUF4055 domain-containing protein | - |
| CF60_RS10295 () | 2128085..2129197 | + | 1113 | WP_001351715.1 | hypothetical protein | - |
| CF60_RS10300 () | 2129302..2130066 | + | 765 | WP_000770042.1 | hypothetical protein | - |
| CF60_RS10305 () | 2130165..2131304 | + | 1140 | WP_000918487.1 | hypothetical protein | - |
| CF60_RS28375 () | 2131347..2131523 | + | 177 | WP_000908084.1 | hypothetical protein | - |
| CF60_RS10310 () | 2131527..2131922 | + | 396 | WP_000634214.1 | hypothetical protein | - |
| CF60_RS10315 () | 2131922..2132305 | + | 384 | WP_000524260.1 | hypothetical protein | - |
| CF60_RS10320 () | 2132306..2132686 | + | 381 | WP_001029815.1 | hypothetical protein | - |
| CF60_RS10325 () | 2132683..2133075 | + | 393 | WP_000144678.1 | hypothetical protein | - |
| CF60_RS10330 () | 2133102..2134064 | + | 963 | WP_025234901.1 | hypothetical protein | - |
| CF60_RS10335 () | 2134215..2134574 | + | 360 | WP_012565075.1 | hypothetical protein | - |
| CF60_RS24870 () | 2135048..2138275 | + | 3228 | Protein_1932 | phage tail tape measure protein | - |
| CF60_RS24875 () | 2138268..2138603 | + | 336 | Protein_1933 | phage tail protein | - |
| CF60_RS27780 () | 2138603..2139293 | + | 691 | Protein_1934 | phage minor tail protein L | - |
| CF60_RS25040 () | 2139299..2139857 | + | 559 | Protein_1935 | phage tail protein | - |
| CF60_RS27155 () | 2139817..2140089 | + | 273 | WP_051539322.1 | hypothetical protein | - |
| CF60_RS10385 () | 2140102..2143089 | + | 2988 | WP_025210440.1 | hypothetical protein | - |
| CF60_RS10390 () | 2143079..2143387 | + | 309 | WP_001165936.1 | hypothetical protein | - |
| CF60_RS10395 () | 2143408..2143758 | - | 351 | Protein_1939 | hypothetical protein | - |
| CF60_RS10400 () | 2143765..2144442 | - | 678 | WP_025210442.1 | DUF2829 domain-containing protein | - |
| CF60_RS10410 () | 2144640..2145128 | - | 489 | WP_025210444.1 | single-stranded DNA-binding protein | - |
| CF60_RS10415 () | 2145298..2145855 | + | 558 | WP_025210445.1 | lysozyme | - |
| CF60_RS10425 () | 2146140..2147159 | - | 1020 | WP_000132937.1 | head processing protein | - |
| CF60_RS10430 () | 2147272..2148402 | + | 1131 | WP_001312284.1 | IS200-IS605 family transposase ISEc42 | Transposase |
| CF60_RS25825 () | 2148587..2148846 | - | 260 | Protein_1945 | recombination enhancement function domain protein | - |
| CF60_RS10440 () | 2149191..2149967 | + | 777 | WP_000691857.1 | MBL fold metallo-hydrolase | - |
| CF60_RS10445 () | 2149983..2150972 | + | 990 | WP_000104482.1 | HTH-type transcriptional regulator CdhR | VF |
| CF60_RS10450 () | 2150999..2151382 | + | 384 | WP_198290423.1 | ester cyclase | - |
| CF60_RS25830 () | 2151489..2151635 | - | 147 | Protein_1949 | helix-turn-helix domain-containing protein | - |
| CF60_RS10455 () | 2151650..2152752 | - | 1103 | Protein_1950 | phage antirepressor KilAC domain-containing protein | - |
| CF60_RS27785 () | 2152749..2153246 | - | 498 | Protein_1951 | host cell division inhibitor Icd-like protein | - |
| CF60_RS10460 () | 2153329..2154813 | - | 1485 | WP_000124159.1 | hypothetical protein | - |
| CF60_RS10465 () | 2154813..2156006 | - | 1194 | WP_025210451.1 | hypothetical protein | - |
| CF60_RS10475 () | 2156338..2159454 | + | 3117 | WP_025210457.1 | HsdR family type I site-specific deoxyribonuclease | - |
| CF60_RS10485 () | 2159719..2160225 | - | 507 | WP_025210458.1 | hypothetical protein | - |
| CF60_RS10490 () | 2160298..2161395 | - | 1098 | WP_038429649.1 | hypothetical protein | - |
| CF60_RS10495 () | 2161525..2162741 | + | 1217 | Protein_1957 | phage tail protein | - |
| CF60_RS10500 () | 2162745..2163473 | + | 729 | WP_000896806.1 | hypothetical protein | - |
| CF60_RS10505 () | 2163460..2164230 | + | 771 | Protein_1959 | baseplate | - |
| CF60_RS27790 () | 2164246..2164389 | + | 144 | Protein_1960 | phage tail tape measure protein | - |
| CF60_RS10510 () | 2164412..2167699 | - | 3288 | WP_000660977.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| CF60_RS10515 () | 2167696..2168601 | - | 906 | WP_025210464.1 | recombination-associated protein RdgC | - |
| CF60_RS10520 () | 2168594..2168878 | - | 285 | WP_001177864.1 | hypothetical protein | - |
| CF60_RS10530 () | 2169340..2170128 | + | 789 | WP_025210465.1 | hypothetical protein | - |
| CF60_RS10535 () | 2170168..2170590 | + | 423 | WP_025210466.1 | hypothetical protein | - |
| CF60_RS10545 () | 2170768..2171160 | + | 393 | WP_001281116.1 | hypothetical protein | - |
| CF60_RS10550 () | 2171496..2172381 | + | 886 | Protein_1967 | RepB family plasmid replication initiator protein | - |
| CF60_RS10555 () | 2172674..2173483 | + | 810 | WP_001154687.1 | GIY-YIG nuclease family protein | - |
| CF60_RS10560 () | 2173652..2174848 | + | 1197 | WP_001285362.1 | AAA family ATPase | - |
| CF60_RS10565 () | 2174865..2175866 | + | 1002 | WP_000038866.1 | ParB/RepB/Spo0J family partition protein | - |
| CF60_RS10570 () | 2176151..2176945 | + | 795 | Protein_1971 | hypothetical protein | - |
| CF60_RS28380 () | 2176931..2177198 | + | 268 | Protein_1972 | hypothetical protein | - |
| CF60_RS10575 () | 2177379..2177728 | + | 350 | Protein_1973 | hypothetical protein | - |
| CF60_RS28385 () | 2178208..2179929 | + | 1722 | Protein_1974 | phage tail length tape measure family protein | - |
| CF60_RS28390 () | 2179942..2181438 | + | 1497 | WP_186189254.1 | phage tail tape measure protein | - |
| CF60_RS10590 () | 2181431..2181769 | + | 339 | WP_000024051.1 | phage tail protein | - |
| CF60_RS10595 () | 2181769..2182467 | + | 699 | WP_001605366.1 | phage minor tail protein L | - |
| CF60_RS10600 () | 2182473..2183216 | + | 744 | WP_001349921.1 | C40 family peptidase | - |
| CF60_RS10605 () | 2183153..2183785 | + | 633 | WP_000090891.1 | tail assembly protein | - |
| CF60_RS10610 () | 2183846..2187325 | + | 3480 | WP_025234914.1 | host specificity protein J | - |
| CF60_RS10615 () | 2187393..2187992 | + | 600 | WP_001228228.1 | Outer membrane protein X | VF |
| CF60_RS10620 () | 2188057..2190432 | + | 2376 | WP_000741766.1 | prophage tail fiber N-terminal domain-containing protein | - |
| CF60_RS10625 () | 2190432..2190713 | + | 282 | WP_000654143.1 | hypothetical protein | - |
| CF60_RS10630 () | 2190723..2191763 | + | 1041 | WP_025210478.1 | tail fiber domain-containing protein | - |
| CF60_RS10635 () | 2191806..2192099 | + | 294 | WP_000355601.1 | hypothetical protein | - |
| CF60_RS25850 () | 2192119..2192229 | + | 111 | Protein_1986 | tail fiber assembly protein | - |
| CF60_RS10640 () | 2192327..2192917 | - | 591 | WP_025210479.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| CF60_RS10645 () | 2193234..2193467 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| CF60_RS27795 () | 2193536..2193649 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| CF60_RS28230 () | 2193989..2194162 | + | 174 | WP_001157926.1 | hypothetical protein | - |
| CF60_RS10650 () | 2194427..2194861 | - | 435 | WP_001295593.1 | universal stress protein UspF | - |
| CF60_RS10655 () | 2195002..2196135 | - | 1134 | WP_000837902.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|