MGE detailed information
MGE type: Prophage MGE length: 40606 bp
Accession: NZ_CP007393 Location: 2705929..2746534 Organism: Escherichia coli strain ST2747 Replicon: chromosome
Accession: NZ_CP007393 Location: 2705929..2746534 Organism: Escherichia coli strain ST2747 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CF59_RS13020 () | 2701784..2702584 | + | 801 | WP_000406928.1 | PTS mannose transporter subunit IIC | - |
| CF59_RS13025 () | 2702597..2703448 | + | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| CF59_RS13030 () | 2703504..2703962 | + | 459 | WP_000156255.1 | DUF986 family protein | - |
| CF59_RS13040 () | 2704391..2704957 | + | 567 | WP_001306762.1 | manganese efflux pump MntP | - |
| CF59_RS13045 () | 2704954..2705763 | - | 810 | WP_000010109.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| CF59_RS13050 () | 2705929..2706138 | - | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| CF59_RS13055 () | 2706151..2706294 | - | 144 | WP_001295496.1 | YobF family protein | - |
| CF59_RS13065 () | 2706964..2707251 | - | 288 | WP_001006855.1 | YebO family protein | - |
| CF59_RS13070 () | 2707326..2707469 | - | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| CF59_RS13075 () | 2707628..2707867 | + | 240 | WP_001211011.1 | hypothetical protein | - |
| CF59_RS13080 () | 2708011..2708802 | - | 792 | WP_001262182.1 | DNA-binding transcriptional regulator KdgR | - |
| CF59_RS13085 () | 2708979..2710352 | + | 1374 | WP_001328842.1 | MFS transporter | - |
| CF59_RS13090 () | 2710398..2711279 | - | 882 | WP_000984517.1 | protease HtpX | - |
| CF59_RS13095 () | 2711471..2713519 | - | 2049 | WP_025210563.1 | carboxy terminal-processing peptidase | - |
| CF59_RS13100 () | 2713539..2714237 | - | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| CF59_RS13105 () | 2714334..2714831 | - | 498 | WP_001043884.1 | L-methionine (R)-S-oxide reductase | - |
| CF59_RS13110 () | 2714961..2716244 | + | 1284 | WP_025210564.1 | membrane integrity lipid transport subunit YebS | - |
| CF59_RS13115 () | 2716213..2718846 | + | 2634 | WP_001306757.1 | hypothetical protein | VF |
| CF59_RS13120 () | 2718926..2720365 | + | 1440 | WP_025210565.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| CF59_RS13125 () | 2720483..2720719 | + | 237 | WP_025210566.1 | DUF1480 family protein | - |
| CF59_RS13130 () | 2720824..2721015 | + | 192 | WP_001296140.1 | YebW family protein | - |
| CF59_RS13135 () | 2721016..2721672 | - | 657 | WP_025210567.1 | protein-serine/threonine phosphatase | - |
| - () | 2721769..2722037 | + | 269 | - | - | Antitoxin Detail |
| - () | 2721807..2721910 | - | 104 | - | - | Toxin Detail |
| CF59_RS13145 () | 2722067..2722408 | - | 342 | WP_000976472.1 | YebY family protein | - |
| CF59_RS13150 () | 2722421..2723293 | - | 873 | WP_025210568.1 | copper homeostasis membrane protein CopD | - |
| CF59_RS13155 () | 2723297..2723671 | - | 375 | WP_000168745.1 | CopC domain-containing protein YobA | - |
| CF59_RS13160 () | 2723810..2724040 | + | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| CF59_RS13165 () | 2724142..2724798 | + | 657 | WP_000011651.1 | carbon-nitrogen hydrolase family protein | - |
| CF59_RS13170 () | 2724822..2725484 | + | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| CF59_RS13175 () | 2725481..2727541 | - | 2061 | WP_025210569.1 | oligopeptidase B | - |
| CF59_RS13180 () | 2727698..2728123 | - | 426 | WP_000064873.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| CF59_RS13185 () | 2728180..2729349 | + | 1170 | WP_025210570.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| CF59_RS13190 () | 2729513..2730172 | - | 660 | WP_025210571.1 | tellurite resistance TerB family protein | - |
| CF59_RS13200 () | 2730499..2730855 | - | 357 | WP_001295500.1 | protein YebF | - |
| CF59_RS13205 () | 2730922..2731212 | - | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| CF59_RS13210 () | 2731346..2732524 | + | 1179 | WP_025210572.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| CF59_RS13215 () | 2732580..2733221 | - | 642 | WP_025210573.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| CF59_RS13220 () | 2733258..2735069 | - | 1812 | WP_001069461.1 | phosphogluconate dehydratase | - |
| CF59_RS13225 () | 2735304..2736779 | - | 1476 | WP_000301727.1 | glucose-6-phosphate dehydrogenase | - |
| CF59_RS13235 () | 2737117..2737986 | + | 870 | WP_001056694.1 | DNA-binding transcriptional regulator HexR | - |
| CF59_RS13240 () | 2738114..2739556 | + | 1443 | WP_000091148.1 | pyruvate kinase | - |
| CF59_RS13245 () | 2739833..2740291 | + | 459 | WP_025210574.1 | IS200-IS605 family transposase IS200C | Transposase |
| CF59_RS13250 () | 2740399..2741370 | - | 972 | WP_000448381.1 | Lipid A biosynthesis myristoyltransferase | VF |
| CF59_RS13255 () | 2741488..2742810 | - | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| CF59_RS13260 () | 2742826..2743758 | - | 933 | WP_011076428.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| CF59_RS13265 () | 2743837..2744592 | + | 756 | WP_000202987.1 | Zinc import ATP-binding protein ZnuC | VF |
| CF59_RS13270 () | 2744589..2745374 | + | 786 | WP_000571471.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| CF59_RS13275 () | 2745524..2746534 | - | 1011 | WP_000568522.1 | Holliday junction branch migration DNA helicase RuvB | - |
| CF59_RS13280 () | 2746543..2747154 | - | 612 | WP_000580323.1 | Holliday junction branch migration protein RuvA | - |
| CF59_RS26410 () | 2747293..2747358 | - | 66 | WP_072146566.1 | stress response small protein YobI | - |
| CF59_RS13285 () | 2747429..2748031 | + | 603 | WP_025210575.1 | YebB family permuted papain-like enzyme | - |
| CF59_RS13290 () | 2748033..2748554 | - | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| CF59_RS13295 () | 2748589..2749329 | - | 741 | WP_000907234.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| CF59_RS13300 () | 2749358..2749810 | - | 453 | WP_001308712.1 | dihydroneopterin triphosphate diphosphatase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|