MGE detailed information
MGE type: Prophage MGE length: 148363 bp
Accession: NZ_CP007393 Location: 2091722..2240084 Organism: Escherichia coli strain ST2747 Replicon: chromosome
Accession: NZ_CP007393 Location: 2091722..2240084 Organism: Escherichia coli strain ST2747 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CF59_RS10020 () | 2087772..2088755 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| CF59_RS10030 () | 2089233..2090606 | + | 1374 | WP_001599773.1 | ATP-dependent RNA helicase DbpA | - |
| CF59_RS10035 () | 2090735..2091670 | - | 936 | WP_001157407.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| CF59_RS25130 () | 2091722..2092957 | - | 1236 | WP_001516465.1 | Putative defective protein IntQ ; Integrase | Integrase |
| CF59_RS10045 () | 2092959..2093174 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| CF59_RS10050 () | 2093274..2093462 | - | 189 | WP_001605349.1 | DUF1187 family protein | - |
| - () | 2093278..2093456 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2093278..2093456 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2093278..2093456 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2093278..2093456 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| CF59_RS10055 () | 2093455..2093649 | - | 195 | WP_032159264.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| CF59_RS10060 () | 2093713..2094765 | - | 1053 | WP_001004422.1 | recombinase RecT | - |
| CF59_RS10065 () | 2094777..2097848 | - | 3072 | WP_001605350.1 | exodeoxyribonuclease VIII | - |
| CF59_RS10070 () | 2097950..2098225 | - | 276 | WP_001344816.1 | hypothetical protein | - |
| CF59_RS10075 () | 2098300..2098470 | - | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| CF59_RS10080 () | 2098470..2098691 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| CF59_RS10085 () | 2099133..2099621 | + | 489 | WP_001312793.1 | superinfection exclusion protein B | - |
| CF59_RS24340 () | 2099618..2099773 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| CF59_RS26295 () | 2099784..2099963 | - | 180 | WP_001326317.1 | hypothetical protein | - |
| CF59_RS10090 () | 2100227..2100703 | - | 477 | WP_001551043.1 | DNA-binding transcriptional repressor RacR | - |
| CF59_RS10095 () | 2100827..2101123 | + | 297 | WP_001551044.1 | toxin YdaS | - |
| CF59_RS10100 () | 2101146..2101568 | + | 423 | WP_025210427.1 | hypothetical protein | - |
| CF59_RS10105 () | 2101646..2102434 | + | 789 | WP_001396581.1 | hypothetical protein | - |
| CF59_RS10110 () | 2102441..2103187 | + | 747 | WP_000788969.1 | ATP-binding protein | - |
| CF59_RS10115 () | 2103210..2103971 | + | 762 | WP_001605353.1 | DUF1627 domain-containing protein | - |
| CF59_RS10120 () | 2103987..2104409 | + | 423 | WP_001605354.1 | DUF977 family protein | - |
| CF59_RS10125 () | 2104570..2104914 | + | 345 | Protein_1897 | hypothetical protein | - |
| CF59_RS10135 () | 2105505..2106656 | + | 1152 | WP_001100703.1 | DNA cytosine methyltransferase | - |
| CF59_RS10140 () | 2106624..2107613 | - | 990 | WP_000016656.1 | hypothetical protein | - |
| CF59_RS10145 () | 2107613..2109004 | - | 1392 | WP_000138556.1 | ATP-binding protein | - |
| CF59_RS10150 () | 2109504..2110103 | + | 600 | WP_000940319.1 | DUF1367 family protein | - |
| CF59_RS10155 () | 2110103..2110393 | + | 291 | WP_001605357.1 | DUF1364 domain-containing protein | - |
| CF59_RS10160 () | 2110390..2110931 | + | 542 | Protein_1903 | DUF1133 family protein | - |
| CF59_RS10165 () | 2111976..2112404 | + | 429 | WP_000506936.1 | cell envelope integrity protein TolA | - |
| CF59_RS10170 () | 2112576..2112950 | + | 375 | WP_001348108.1 | hypothetical protein | - |
| CF59_RS10175 () | 2113202..2113417 | + | 216 | WP_000839565.1 | phage lysis protein EssD | - |
| CF59_RS10180 () | 2113417..2113914 | + | 498 | WP_001135310.1 | lysozyme RrrD | - |
| CF59_RS26305 () | 2114131..2114316 | + | 186 | WP_001228688.1 | prophage lysis lipoprotein RzoD | - |
| CF59_RS10190 () | 2114513..2115970 | + | 1458 | WP_001097895.1 | Trk system potassium transporter TrkG | - |
| CF59_RS10195 () | 2116108..2116899 | + | 792 | WP_025210428.1 | ParB/Srx family N-terminal domain-containing protein | - |
| CF59_RS10200 () | 2116892..2117824 | + | 933 | WP_001204037.1 | hypothetical protein | - |
| CF59_RS10205 () | 2117760..2118011 | + | 252 | WP_000613571.1 | hypothetical protein | - |
| CF59_RS10210 () | 2118015..2119109 | + | 1095 | WP_000089447.1 | terminase small subunit | - |
| CF59_RS10215 () | 2119090..2120391 | + | 1302 | WP_000625348.1 | terminase family protein | - |
| CF59_RS10220 () | 2120394..2121800 | + | 1407 | WP_000763704.1 | DUF4055 domain-containing protein | - |
| CF59_RS10225 () | 2121784..2122896 | + | 1113 | WP_001351715.1 | hypothetical protein | - |
| CF59_RS10230 () | 2123001..2123765 | + | 765 | WP_000770042.1 | hypothetical protein | - |
| CF59_RS10235 () | 2123864..2125003 | + | 1140 | WP_000918487.1 | hypothetical protein | - |
| CF59_RS26845 () | 2125046..2125222 | + | 177 | WP_000908084.1 | hypothetical protein | - |
| CF59_RS10240 () | 2125226..2125621 | + | 396 | WP_000634214.1 | hypothetical protein | - |
| CF59_RS10245 () | 2125621..2126004 | + | 384 | WP_000524260.1 | hypothetical protein | - |
| CF59_RS10250 () | 2126005..2126385 | + | 381 | WP_001029815.1 | hypothetical protein | - |
| CF59_RS10255 () | 2126382..2126774 | + | 393 | WP_000144678.1 | hypothetical protein | - |
| CF59_RS10260 () | 2126801..2127751 | + | 951 | WP_051529909.1 | hypothetical protein | - |
| CF59_RS10265 () | 2127915..2128274 | + | 360 | WP_012565075.1 | hypothetical protein | - |
| CF59_RS10275 () | 2128748..2131981 | + | 3234 | WP_001605364.1 | phage tail tape measure protein | - |
| CF59_RS10280 () | 2131974..2132312 | + | 339 | WP_000024051.1 | phage tail protein | - |
| CF59_RS10285 () | 2132312..2133010 | + | 699 | WP_001605366.1 | phage minor tail protein L | - |
| CF59_RS10290 () | 2133016..2133760 | + | 745 | Protein_1929 | phage tail protein | - |
| CF59_RS10295 () | 2133697..2134329 | + | 633 | WP_000090891.1 | tail assembly protein | - |
| CF59_RS10300 () | 2134390..2137867 | + | 3478 | Protein_1931 | host specificity protein J | - |
| CF59_RS10305 () | 2137935..2138535 | + | 601 | Protein_1932 | Outer membrane protein X | VF |
| CF59_RS10310 () | 2138599..2139003 | + | 405 | Protein_1933 | prophage tail fiber N-terminal domain-containing protein | - |
| CF59_RS10315 () | 2139052..2139825 | + | 774 | Protein_1934 | morphogenetic protein | - |
| CF59_RS10320 () | 2139907..2143335 | + | 3429 | WP_025210431.1 | lytic transglycosylase domain-containing protein | - |
| CF59_RS10325 () | 2143335..2143691 | + | 357 | WP_000002800.1 | hypothetical protein | - |
| CF59_RS10330 () | 2143688..2145121 | + | 1434 | WP_025210432.1 | bleomycin hydrolase | - |
| CF59_RS10335 () | 2145121..2145957 | + | 837 | WP_025210433.1 | hypothetical protein | - |
| CF59_RS10340 () | 2146036..2146470 | + | 435 | WP_025210434.1 | hypothetical protein | - |
| CF59_RS10345 () | 2146482..2147867 | + | 1386 | Protein_1940 | tail fiber protein | - |
| CF59_RS10355 () | 2148342..2148974 | + | 633 | Protein_1941 | tail fiber protein | - |
| CF59_RS10360 () | 2148974..2149591 | + | 618 | WP_025210437.1 | tail fiber assembly protein | - |
| CF59_RS10365 () | 2149555..2150100 | - | 546 | WP_038428224.1 | serine acetyltransferase | - |
| CF59_RS10370 () | 2151117..2151446 | + | 330 | WP_000887652.1 | holin | - |
| CF59_RS10375 () | 2151443..2151886 | + | 444 | WP_000580776.1 | hypothetical protein | - |
| CF59_RS10380 () | 2151873..2152475 | + | 603 | WP_025210438.1 | hypothetical protein | - |
| CF59_RS10385 () | 2152477..2154396 | + | 1920 | WP_025210439.1 | phage protein DarA | - |
| CF59_RS10390 () | 2154393..2154758 | + | 366 | WP_023351539.1 | hypothetical protein | - |
| CF59_RS10395 () | 2154771..2157758 | + | 2988 | WP_025210440.1 | hypothetical protein | - |
| CF59_RS10400 () | 2157748..2158056 | + | 309 | WP_001165936.1 | hypothetical protein | - |
| CF59_RS10405 () | 2158085..2158873 | - | 789 | WP_025210441.1 | hypothetical protein | - |
| CF59_RS10410 () | 2158880..2159557 | - | 678 | WP_025210442.1 | DUF2829 domain-containing protein | - |
| CF59_RS10420 () | 2159755..2160243 | - | 489 | WP_025210444.1 | single-stranded DNA-binding protein | - |
| CF59_RS10425 () | 2160413..2160970 | + | 558 | WP_025210445.1 | lysozyme | - |
| CF59_RS10435 () | 2161256..2162275 | - | 1020 | WP_000132937.1 | head processing protein | - |
| CF59_RS10440 () | 2162388..2163518 | + | 1131 | WP_001312284.1 | IS200-IS605 family transposase ISEc42 | Transposase |
| CF59_RS10445 () | 2163551..2165272 | - | 1722 | WP_025210446.1 | hypothetical protein | - |
| CF59_RS10450 () | 2165348..2170167 | + | 4820 | Protein_1958 | N-6 DNA methylase | - |
| CF59_RS10455 () | 2170201..2170641 | + | 441 | WP_000224043.1 | hypothetical protein | - |
| CF59_RS10465 () | 2170925..2171647 | - | 723 | WP_025210447.1 | helix-turn-helix domain-containing protein | - |
| CF59_RS10470 () | 2171896..2172585 | + | 690 | WP_025210448.1 | EAL domain-containing protein | - |
| CF59_RS10475 () | 2172639..2173394 | - | 756 | WP_170998677.1 | hypothetical protein | - |
| CF59_RS10480 () | 2173473..2173859 | - | 387 | WP_072262119.1 | Ref family protein | - |
| CF59_RS10485 () | 2174078..2174854 | + | 777 | WP_000691857.1 | MBL fold metallo-hydrolase | - |
| CF59_RS10490 () | 2174870..2175859 | + | 990 | WP_000104482.1 | HTH-type transcriptional regulator CdhR | VF |
| CF59_RS10495 () | 2175886..2176269 | + | 384 | WP_198290423.1 | ester cyclase | - |
| CF59_RS26310 () | 2176376..2177015 | - | 640 | Protein_1967 | recombinase family protein | - |
| CF59_RS25170 () | 2177064..2177171 | + | 108 | WP_071595431.1 | Tn3 family transposase | - |
| CF59_RS10505 () | 2177364..2177675 | - | 312 | WP_016246567.1 | hypothetical protein | - |
| CF59_RS10515 () | 2177985..2178194 | + | 210 | WP_000874156.1 | hypothetical protein | - |
| CF59_RS10520 () | 2178305..2179156 | + | 852 | WP_000611666.1 | hypothetical protein | - |
| CF59_RS10525 () | 2179189..2180291 | - | 1103 | Protein_1972 | phage antirepressor KilAC domain-containing protein | - |
| CF59_RS26315 () | 2180288..2180872 | - | 585 | Protein_1973 | host cell division inhibitor Icd-like protein | - |
| CF59_RS10530 () | 2180869..2182353 | - | 1485 | WP_000124159.1 | hypothetical protein | - |
| CF59_RS10535 () | 2182353..2183546 | - | 1194 | WP_025210451.1 | hypothetical protein | - |
| CF59_RS10540 () | 2183632..2184084 | - | 453 | WP_001326849.1 | late promoter-activating protein | - |
| CF59_RS10545 () | 2184173..2185216 | - | 1044 | WP_025210452.1 | DUF968 domain-containing protein | - |
| CF59_RS10550 () | 2185244..2185423 | - | 180 | WP_025210453.1 | hypothetical protein | - |
| CF59_RS10555 () | 2185428..2185808 | - | 381 | WP_025210454.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| CF59_RS10560 () | 2185808..2186029 | - | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| CF59_RS10565 () | 2186212..2187768 | + | 1557 | WP_025210455.1 | type I restriction-modification system subunit M | - |
| CF59_RS10570 () | 2187765..2188976 | + | 1212 | WP_025210456.1 | restriction endonuclease subunit S | - |
| CF59_RS10575 () | 2189099..2192215 | + | 3117 | WP_025210457.1 | HsdR family type I site-specific deoxyribonuclease | - |
| CF59_RS10585 () | 2192480..2192986 | - | 507 | WP_025210458.1 | hypothetical protein | - |
| CF59_RS10590 () | 2193072..2194322 | - | 1251 | Protein_1985 | hypothetical protein | - |
| CF59_RS10600 () | 2194624..2195326 | - | 703 | Protein_1986 | hypothetical protein | - |
| CF59_RS10605 () | 2195323..2196000 | - | 678 | WP_025210461.1 | metallophosphoesterase | - |
| CF59_RS10610 () | 2195997..2196623 | - | 627 | WP_000484111.1 | norphogenetic protein | - |
| CF59_RS10620 () | 2197125..2197280 | - | 156 | WP_000096174.1 | hypothetical protein | - |
| CF59_RS10625 () | 2197347..2197925 | - | 579 | WP_000943607.1 | VRR-NUC domain-containing protein | - |
| CF59_RS10630 () | 2197928..2198173 | - | 246 | WP_000840931.1 | hypothetical protein | - |
| CF59_RS10635 () | 2198320..2198697 | + | 378 | WP_000235786.1 | hypothetical protein | - |
| CF59_RS10640 () | 2198707..2199924 | + | 1218 | WP_025210462.1 | hypothetical protein | - |
| CF59_RS10645 () | 2199928..2200656 | + | 729 | WP_000896806.1 | hypothetical protein | - |
| CF59_RS10650 () | 2200643..2201428 | + | 786 | WP_015974270.1 | hypothetical protein | - |
| CF59_RS10655 () | 2201430..2202447 | + | 1018 | Protein_1996 | phage tail tape measure protein | - |
| CF59_RS10660 () | 2202440..2203072 | + | 633 | WP_000535202.1 | baseplate protein | - |
| CF59_RS10665 () | 2203119..2204117 | - | 999 | WP_001198665.1 | hypothetical protein | - |
| CF59_RS10670 () | 2204117..2205481 | - | 1365 | WP_025210463.1 | replicative DNA helicase | - |
| CF59_RS26320 () | 2205949..2206113 | - | 165 | WP_000234830.1 | DUF3927 family protein | - |
| CF59_RS10685 () | 2206113..2206538 | - | 426 | WP_000900641.1 | tellurite/colicin resistance protein | - |
| CF59_RS26855 () | 2207874..2208134 | + | 261 | WP_162149578.1 | hypothetical protein | - |
| CF59_RS10705 () | 2208193..2211480 | - | 3288 | WP_000660977.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| CF59_RS10710 () | 2211477..2212382 | - | 906 | WP_025210464.1 | recombination-associated protein RdgC | - |
| CF59_RS10715 () | 2212375..2212659 | - | 285 | WP_001177864.1 | hypothetical protein | - |
| CF59_RS10725 () | 2213122..2213910 | + | 789 | WP_025210465.1 | hypothetical protein | - |
| CF59_RS10730 () | 2213950..2214372 | + | 423 | WP_025210466.1 | hypothetical protein | - |
| CF59_RS26860 () | 2214398..2214538 | + | 141 | WP_000336812.1 | hypothetical protein | - |
| CF59_RS10740 () | 2214550..2214942 | + | 393 | WP_001281116.1 | hypothetical protein | - |
| CF59_RS10745 () | 2215278..2216162 | + | 885 | WP_001113742.1 | RepB family plasmid replication initiator protein | - |
| CF59_RS10750 () | 2216455..2217264 | + | 810 | WP_001154687.1 | GIY-YIG nuclease family protein | - |
| CF59_RS10755 () | 2217433..2218629 | + | 1197 | WP_001285362.1 | AAA family ATPase | - |
| CF59_RS10760 () | 2218646..2219647 | + | 1002 | WP_000038866.1 | ParB/RepB/Spo0J family partition protein | - |
| CF59_RS10765 () | 2219873..2221579 | + | 1707 | WP_025210467.1 | hypothetical protein | - |
| CF59_RS10770 () | 2221640..2223229 | + | 1590 | WP_025210468.1 | hypothetical protein | - |
| CF59_RS10775 () | 2223239..2224054 | + | 816 | WP_000041756.1 | hypothetical protein | - |
| CF59_RS24445 () | 2224090..2224671 | + | 582 | WP_025210469.1 | hypothetical protein | - |
| CF59_RS10785 () | 2224683..2225192 | + | 510 | WP_001615627.1 | hypothetical protein | - |
| CF59_RS10790 () | 2225364..2225960 | + | 597 | WP_025210470.1 | hypothetical protein | - |
| CF59_RS10800 () | 2226454..2226969 | - | 516 | WP_025210472.1 | Attachment invasion locus protein | VF |
| CF59_RS10805 () | 2227065..2227907 | - | 843 | WP_025210473.1 | hypothetical protein | - |
| CF59_RS10810 () | 2227966..2228745 | - | 780 | Protein_2022 | phage antirepressor KilAC domain-containing protein | - |
| CF59_RS25210 () | 2229385..2230185 | - | 801 | WP_071849758.1 | phage antirepressor KilAC domain-containing protein | - |
| CF59_RS26330 () | 2230192..2230776 | - | 585 | Protein_2024 | phage antirepressor Ant | - |
| CF59_RS25215 () | 2230773..2230994 | - | 222 | WP_071849748.1 | host cell division inhibitor Icd-like protein | - |
| CF59_RS10830 () | 2231241..2234492 | + | 3252 | Protein_2026 | host specificity protein J | - |
| CF59_RS10835 () | 2234560..2235159 | + | 600 | WP_001228228.1 | Outer membrane protein X | VF |
| CF59_RS10840 () | 2235224..2237599 | + | 2376 | WP_000741766.1 | prophage tail fiber N-terminal domain-containing protein | - |
| CF59_RS10845 () | 2237599..2237880 | + | 282 | WP_000654143.1 | hypothetical protein | - |
| CF59_RS10850 () | 2237890..2238930 | + | 1041 | WP_025210478.1 | tail fiber domain-containing protein | - |
| CF59_RS10855 () | 2238973..2239266 | + | 294 | WP_000355601.1 | hypothetical protein | - |
| CF59_RS25225 () | 2239286..2239396 | + | 111 | Protein_2032 | tail fiber assembly protein | - |
| CF59_RS10860 () | 2239494..2240084 | - | 591 | WP_025210479.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| CF59_RS10865 () | 2240401..2240634 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| CF59_RS26865 () | 2240703..2240816 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| CF59_RS10870 () | 2241594..2242028 | - | 435 | WP_001295593.1 | universal stress protein UspF | - |
| CF59_RS10875 () | 2242169..2243302 | - | 1134 | WP_000837902.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|