MGE detailed information
MGE type: Prophage MGE length: 53441 bp
Accession: NZ_CP007390 Location: 1915501..1968941 Organism: Escherichia coli strain ST540 Replicon: chromosome
Accession: NZ_CP007390 Location: 1915501..1968941 Organism: Escherichia coli strain ST540 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CF57_RS09495 () | 1912723..1913694 | - | 972 | WP_000564726.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| CF57_RS09500 () | 1913691..1914434 | - | 744 | WP_000019588.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| CF57_RS09505 () | 1914475..1914870 | - | 396 | WP_000252980.1 | MAPEG family protein | - |
| CF57_RS09510 () | 1914923..1915600 | - | 678 | WP_042337314.1 | DUF72 domain-containing protein | - |
| CF57_RS09515 () | 1915765..1916283 | - | 519 | Protein_1802 | phage recombination protein Bet | - |
| CF57_RS09520 () | 1916300..1916584 | - | 285 | WP_016529276.1 | host nuclease inhibitor GamL | - |
| CF57_RS09525 () | 1916592..1917563 | - | 972 | WP_025269996.1 | hypothetical protein | - |
| CF57_RS09530 () | 1917813..1918010 | + | 198 | WP_025269967.1 | hypothetical protein | - |
| CF57_RS09535 () | 1918047..1918229 | + | 183 | WP_025269966.1 | hypothetical protein | - |
| CF57_RS09540 () | 1918226..1918489 | + | 264 | WP_025269997.1 | DNA polymerase III subunit theta | - |
| CF57_RS09545 () | 1918596..1919051 | + | 456 | Protein_1808 | DUF1367 family protein | - |
| CF57_RS27040 () | 1919151..1919291 | + | 141 | WP_001548467.1 | YlcG family protein | - |
| CF57_RS09555 () | 1919288..1919977 | + | 690 | WP_025269999.1 | antiterminator | - |
| CF57_RS09565 () | 1920433..1920660 | + | 228 | Protein_1811 | phage holin family protein | - |
| CF57_RS26380 () | 1920661..1920840 | + | 180 | Protein_1812 | hypothetical protein | - |
| CF57_RS09570 () | 1920840..1921721 | + | 882 | WP_025270001.1 | hypothetical protein | - |
| CF57_RS27805 () | 1921721..1921891 | + | 171 | WP_164686900.1 | hypothetical protein | - |
| CF57_RS09575 () | 1921973..1924057 | + | 2085 | WP_140414703.1 | hypothetical protein | - |
| CF57_RS09580 () | 1924066..1924245 | + | 180 | WP_025270003.1 | hypothetical protein | - |
| CF57_RS09585 () | 1924359..1924676 | + | 318 | WP_025270004.1 | hypothetical protein | - |
| CF57_RS09590 () | 1924941..1925507 | - | 567 | WP_000891621.1 | hydrolase | - |
| CF57_RS09595 () | 1925817..1927589 | + | 1773 | WP_001258678.1 | aspartate--tRNA ligase | - |
| CF57_RS09600 () | 1927707..1928159 | + | 453 | WP_001300367.1 | dihydroneopterin triphosphate diphosphatase | - |
| CF57_RS09605 () | 1928188..1928928 | + | 741 | WP_000907234.1 | hypothetical protein | VF |
| CF57_RS09610 () | 1928963..1929484 | + | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| CF57_RS09615 () | 1929486..1930088 | - | 603 | WP_001024904.1 | YebB family permuted papain-like enzyme | - |
| CF57_RS26385 () | 1930159..1930224 | + | 66 | WP_072094247.1 | stress response small protein YobI | - |
| CF57_RS09620 () | 1930363..1930974 | + | 612 | WP_000580327.1 | Holliday junction branch migration protein RuvA | - |
| CF57_RS09625 () | 1930983..1931993 | + | 1011 | WP_000568519.1 | Holliday junction branch migration DNA helicase RuvB | - |
| CF57_RS09630 () | 1932140..1932925 | - | 786 | WP_000571479.1 | hypothetical protein | VF |
| CF57_RS09635 () | 1932922..1933677 | - | 756 | WP_000202990.1 | hypothetical protein | VF |
| CF57_RS09640 () | 1933756..1934688 | + | 933 | WP_001300644.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| CF57_RS09645 () | 1934704..1936026 | + | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| CF57_RS09650 () | 1936146..1937117 | + | 972 | WP_000448381.1 | hypothetical protein | VF |
| CF57_RS09655 () | 1937248..1938690 | - | 1443 | WP_000091148.1 | pyruvate kinase | - |
| CF57_RS09660 () | 1938818..1939687 | - | 870 | WP_001056706.1 | DNA-binding transcriptional regulator HexR | - |
| CF57_RS09670 () | 1940025..1941500 | + | 1476 | WP_000301727.1 | glucose-6-phosphate dehydrogenase | - |
| CF57_RS09675 () | 1941735..1943546 | + | 1812 | WP_001069487.1 | phosphogluconate dehydratase | - |
| CF57_RS09680 () | 1943583..1944224 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| CF57_RS09685 () | 1944280..1945458 | - | 1179 | WP_001515449.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| CF57_RS09690 () | 1945592..1945882 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| CF57_RS09695 () | 1945949..1946305 | + | 357 | WP_001295500.1 | protein YebF | - |
| CF57_RS09705 () | 1946632..1947291 | + | 660 | WP_001515447.1 | tellurite resistance TerB family protein | - |
| CF57_RS09710 () | 1947500..1949560 | + | 2061 | WP_001515446.1 | oligopeptidase B | - |
| CF57_RS09715 () | 1949557..1950219 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| CF57_RS09720 () | 1950243..1950899 | - | 657 | WP_000011660.1 | carbon-nitrogen hydrolase family protein | - |
| CF57_RS09725 () | 1951001..1951090 | - | 90 | Protein_1844 | DNA polymerase III subunit theta | - |
| CF57_RS09730 () | 1951201..1951575 | + | 375 | WP_000168739.1 | CopC domain-containing protein YobA | - |
| CF57_RS09735 () | 1951579..1952451 | + | 873 | WP_000879277.1 | copper homeostasis membrane protein CopD | - |
| CF57_RS09740 () | 1952464..1952805 | + | 342 | WP_001515445.1 | YebY family protein | - |
| - () | 1952835..1953103 | - | 269 | - | - | Antitoxin Detail |
| - () | 1952962..1953065 | + | 104 | - | - | Toxin Detail |
| CF57_RS09750 () | 1953200..1953856 | + | 657 | WP_001515444.1 | protein-serine/threonine phosphatase | - |
| CF57_RS09755 () | 1953857..1954048 | - | 192 | WP_001296140.1 | YebW family protein | - |
| CF57_RS09760 () | 1954153..1954389 | - | 237 | WP_001295499.1 | DUF1480 family protein | - |
| CF57_RS09765 () | 1954507..1955946 | - | 1440 | WP_024189843.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| CF57_RS09770 () | 1956026..1958659 | - | 2634 | WP_025270005.1 | hypothetical protein | VF |
| CF57_RS09775 () | 1958628..1959911 | - | 1284 | WP_001207283.1 | membrane integrity lipid transport subunit YebS | - |
| CF57_RS09780 () | 1960041..1960538 | + | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
| CF57_RS09785 () | 1960635..1961333 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| CF57_RS09790 () | 1961353..1963401 | + | 2049 | WP_001315679.1 | carboxy terminal-processing peptidase | - |
| CF57_RS09795 () | 1963593..1964474 | + | 882 | WP_000984517.1 | protease HtpX | - |
| CF57_RS09800 () | 1964520..1965893 | - | 1374 | WP_001127216.1 | MFS transporter | - |
| CF57_RS09805 () | 1966070..1966861 | + | 792 | WP_001262182.1 | DNA-binding transcriptional regulator KdgR | - |
| CF57_RS09810 () | 1967004..1967243 | - | 240 | WP_001211011.1 | hypothetical protein | - |
| CF57_RS09815 () | 1967402..1967545 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| CF57_RS09820 () | 1967620..1967907 | + | 288 | WP_001006866.1 | YebO family protein | - |
| CF57_RS09830 () | 1968576..1968719 | + | 144 | WP_001295496.1 | YobF family protein | - |
| CF57_RS09835 () | 1968732..1968941 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| CF57_RS09840 () | 1969107..1969916 | + | 810 | WP_025270006.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| CF57_RS09845 () | 1969913..1970479 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| CF57_RS09855 () | 1970908..1971366 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| CF57_RS09860 () | 1971421..1972272 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| CF57_RS09865 () | 1972285..1973085 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|