MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 60687 bp
Accession: NZ_CP007231 Location: 1..60687 Organism: Yersinia similis strain Y_sim_228 Replicon: plasmid unnamed
Accession: NZ_CP007231 Location: 1..60687 Organism: Yersinia similis strain Y_sim_228 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BF17_RS25775 () | 1253..1486 | - | 234 | Protein_1 | type IV pilus biogenesis protein PilM | - |
| BF17_RS22930 () | 1655..2689 | - | 1035 | WP_081761384.1 | toxin co-regulated pilus biosynthesis Q family protein | - |
| BF17_RS22395 () | 2783..2983 | - | 201 | WP_025384492.1 | hypothetical protein | - |
| BF17_RS22405 () | 3356..3814 | - | 459 | WP_025384494.1 | hypothetical protein | - |
| BF17_RS22410 () | 4235..4528 | - | 294 | WP_025384495.1 | sigma-70 region 4 domain-containing protein | - |
| BF17_RS22415 () | 5401..6426 | + | 1026 | WP_025384496.1 | replication initiation protein | - |
| BF17_RS22420 () | 7282..7761 | + | 480 | WP_025384497.1 | Hcp family type VI secretion system effector | - |
| BF17_RS22430 () | 8009..8746 | - | 738 | WP_025384499.1 | hypothetical protein | - |
| BF17_RS25250 () | 8980..9126 | - | 147 | Protein_9 | group II intron reverse transcriptase/maturase | - |
| BF17_RS22435 () | 9207..10259 | - | 1053 | WP_025384500.1 | DNA-binding protein | - |
| BF17_RS22440 () | 10474..10821 | + | 348 | WP_025384501.1 | hypothetical protein | - |
| BF17_RS22445 () | 11008..11976 | + | 969 | WP_025384502.1 | recombinase family protein | - |
| BF17_RS22450 () | 12544..13170 | - | 627 | WP_025384503.1 | DUF2913 family protein | - |
| BF17_RS22455 () | 13241..13621 | - | 381 | WP_025384504.1 | PIN domain-containing protein | - |
| BF17_RS22460 () | 13621..13836 | - | 216 | WP_025384505.1 | hypothetical protein | - |
| BF17_RS22465 () | 14005..14283 | - | 279 | WP_025384506.1 | CopG family transcriptional regulator | - |
| BF17_RS22470 () | 14317..14970 | - | 654 | WP_025384507.1 | AAA family ATPase | - |
| BF17_RS25445 () | 15188..15394 | + | 207 | WP_025384508.1 | hypothetical protein | - |
| BF17_RS25885 () | 15678..15896 | - | 219 | WP_197090733.1 | hypothetical protein | - |
| BF17_RS22485 () | 15875..16381 | + | 507 | WP_025384510.1 | antirestriction protein ArdA | - |
| BF17_RS22490 () | 16425..16625 | + | 201 | WP_025384511.1 | hypothetical protein | - |
| BF17_RS22500 () | 17559..17933 | + | 375 | WP_025384513.1 | hypothetical protein | - |
| BF17_RS22505 () | 18005..18358 | + | 354 | WP_025384514.1 | DUF3085 domain-containing protein | - |
| BF17_RS22515 () | 18794..19633 | + | 840 | WP_048677757.1 | DUF4942 domain-containing protein | - |
| BF17_RS22520 () | 19735..20031 | + | 297 | WP_025384517.1 | type II toxin-antitoxin system MqsR family toxin | Toxin Detail |
| BF17_RS22525 () | 20034..20432 | + | 399 | WP_025384518.1 | type II toxin-antitoxin system MqsA family antitoxin | Antitoxin Detail |
| BF17_RS22530 () | 20835..21284 | + | 450 | WP_048677753.1 | antirestriction protein | - |
| BF17_RS22535 () | 21431..21682 | + | 252 | WP_012606366.1 | hypothetical protein | - |
| BF17_RS22540 () | 21888..22157 | + | 270 | WP_025384520.1 | hypothetical protein | - |
| BF17_RS22545 () | 22521..22829 | - | 309 | WP_025384521.1 | hypothetical protein | - |
| BF17_RS22550 () | 23102..23425 | + | 324 | WP_025384522.1 | ribbon-helix-helix protein, CopG family | - |
| BF17_RS22555 () | 23422..25332 | + | 1911 | WP_025384523.1 | relaxase/mobilization nuclease domain-containing protein | - |
| BF17_RS22560 () | 25500..25967 | + | 468 | WP_040118654.1 | GNAT family N-acetyltransferase | - |
| BF17_RS22565 () | 26550..26891 | - | 342 | WP_025384525.1 | hypothetical protein | - |
| BF17_RS22570 () | 26888..27442 | - | 555 | WP_144236133.1 | phospholipase D family protein | - |
| BF17_RS22575 () | 27429..29612 | - | 2184 | WP_025384527.1 | conjugal transfer protein TrbC | - |
| BF17_RS22580 () | 29625..30602 | - | 978 | WP_025384528.1 | thioredoxin fold domain-containing protein | - |
| BF17_RS22585 () | 30617..31909 | - | 1293 | WP_025384529.1 | hypothetical protein | - |
| BF17_RS22590 () | 32017..32652 | - | 636 | WP_025384530.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| BF17_RS22595 () | 32731..34890 | - | 2160 | WP_025384531.1 | DotA/TraY family protein | - |
| BF17_RS22935 () | 34894..35514 | - | 621 | WP_025384532.1 | conjugal transfer protein TraX | - |
| BF17_RS22605 () | 35507..36706 | - | 1200 | WP_025384533.1 | conjugal transfer protein TraW | - |
| BF17_RS22610 () | 36715..39789 | - | 3075 | WP_040118655.1 | conjugal transfer protein | - |
| BF17_RS22940 () | 39791..40408 | - | 618 | WP_025384535.1 | hypothetical protein | - |
| BF17_RS22620 () | 40698..41093 | - | 396 | WP_025384536.1 | hypothetical protein | - |
| BF17_RS22625 () | 41234..41773 | - | 540 | WP_025384537.1 | conjugal transfer protein TraQ | - |
| BF17_RS22630 () | 41784..42584 | - | 801 | WP_025384538.1 | conjugal transfer protein TraP | - |
| BF17_RS22635 () | 42601..43920 | - | 1320 | WP_025384539.1 | conjugal transfer protein TraO | - |
| BF17_RS22640 () | 43924..44898 | - | 975 | WP_025384540.1 | conjugal transfer protein TraN | - |
| BF17_RS22645 () | 44912..45589 | - | 678 | WP_025384541.1 | DotI/IcmL/TraM family protein | - |
| BF17_RS22650 () | 45640..46071 | - | 432 | WP_025384542.1 | hypothetical protein | - |
| BF17_RS22655 () | 46080..49691 | - | 3612 | WP_025384543.1 | hypothetical protein | - |
| BF17_RS22660 () | 49707..49967 | - | 261 | WP_025384544.1 | IcmT/TraK family protein | - |
| BF17_RS22665 () | 49999..51165 | - | 1167 | WP_025384545.1 | plasmid transfer ATPase TraJ | - |
| BF17_RS22670 () | 51170..51958 | - | 789 | WP_025384546.1 | type IV secretion system DotC family protein | - |
| BF17_RS22675 () | 51955..52410 | - | 456 | WP_025384547.1 | DotD/TraH family lipoprotein | - |
| BF17_RS22680 () | 52462..53859 | - | 1398 | WP_025384548.1 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| BF17_RS22945 () | 53856..54536 | - | 681 | WP_025384549.1 | prepilin peptidase | - |
| BF17_RS22690 () | 54533..55024 | - | 492 | WP_025384550.1 | lytic transglycosylase domain-containing protein | - |
| BF17_RS22695 () | 55094..55681 | - | 588 | WP_025384551.1 | prepilin | - |
| BF17_RS22700 () | 55745..56866 | - | 1122 | WP_025384552.1 | type II secretion system F family protein | - |
| BF17_RS22705 () | 56863..58356 | - | 1494 | WP_025384553.1 | Flp pilus assembly complex ATPase component TadA | - |
| BF17_RS22710 () | 58364..58972 | - | 609 | WP_025384554.1 | type IV pilus biogenesis protein PilP | - |
| BF17_RS22715 () | 58962..60260 | - | 1299 | WP_025384555.1 | type 4b pilus protein PilO2 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|