MGE detailed information
MGE type: Prophage MGE length: 59305 bp
Accession: NZ_CP007230 Location: 486498..545802 Organism: Yersinia similis strain Y_sim_228 Replicon: chromosome
Accession: NZ_CP007230 Location: 486498..545802 Organism: Yersinia similis strain Y_sim_228 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BF17_RS23075 () | 482214..482363 | + | 150 | WP_071825425.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| BF17_RS24755 () | 482379..482546 | + | 168 | WP_072081502.1 | transposase | - |
| BF17_RS22735 () | 482613..482843 | + | 231 | WP_025381165.1 | transposase | - |
| BF17_RS22740 () | 482917..483183 | + | 267 | WP_144236043.1 | transposase | - |
| BF17_RS02170 () | 483490..485772 | + | 2283 | WP_025381167.1 | AAA family ATPase | - |
| BF17_RS02180 () | 486309..488147 | + | 1839 | WP_025381168.1 | retron Ec67 family RNA-directed DNA polymerase/endonuclease | - |
| BF17_RS02185 () | 488443..491289 | - | 2847 | WP_144236044.1 | conjugative transfer ATPase | - |
| BF17_RS02190 () | 491289..491690 | - | 402 | WP_025381170.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| BF17_RS02195 () | 491703..493220 | - | 1518 | WP_025381171.1 | TIGR03752 family integrating conjugative element protein | - |
| BF17_RS02200 () | 493217..494083 | - | 867 | WP_025381172.1 | TIGR03749 family integrating conjugative element protein | - |
| BF17_RS02205 () | 494080..494733 | - | 654 | WP_025381173.1 | TIGR03746 family integrating conjugative element protein | - |
| BF17_RS02210 () | 494730..495104 | - | 375 | WP_025381174.1 | TIGR03750 family conjugal transfer protein | - |
| BF17_RS24330 () | 495114..495464 | - | 351 | WP_012105788.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| BF17_RS24335 () | 495480..495719 | - | 240 | WP_172601548.1 | TIGR03758 family integrating conjugative element protein | - |
| BF17_RS02225 () | 495725..496033 | - | 309 | WP_025381175.1 | RAQPRD family integrative conjugative element protein | - |
| BF17_RS02230 () | 496229..496981 | - | 753 | WP_025381176.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| BF17_RS02235 () | 496981..499101 | - | 2121 | WP_025381177.1 | type IV conjugative transfer system coupling protein TraD | - |
| BF17_RS02240 () | 499160..499681 | - | 522 | WP_025381178.1 | integrating conjugative element protein | - |
| BF17_RS02245 () | 499678..500226 | - | 549 | WP_086026639.1 | transglycosylase SLT domain-containing protein | - |
| BF17_RS02250 () | 500295..501113 | - | 819 | WP_162471854.1 | TIGR03759 family integrating conjugative element protein | - |
| BF17_RS02255 () | 501205..501537 | - | 333 | WP_012105799.1 | hypothetical protein | - |
| BF17_RS02260 () | 501527..501733 | - | 207 | WP_012105800.1 | hypothetical protein | - |
| BF17_RS25515 () | 501868..502041 | + | 174 | WP_004705581.1 | hypothetical protein | - |
| BF17_RS02265 () | 502134..502430 | - | 297 | WP_025381180.1 | hypothetical protein | - |
| BF17_RS02270 () | 502433..502651 | - | 219 | WP_049870161.1 | hypothetical protein | - |
| BF17_RS02275 () | 502718..503056 | - | 339 | WP_025381181.1 | helix-turn-helix domain-containing protein | - |
| BF17_RS02280 () | 503053..503415 | - | 363 | WP_038401988.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| BF17_RS02285 () | 503798..504709 | + | 912 | WP_048677771.1 | hypothetical protein | - |
| BF17_RS02295 () | 505237..506157 | - | 921 | WP_048677776.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| BF17_RS02300 () | 506560..507504 | - | 945 | WP_049870173.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| BF17_RS02305 () | 507598..508875 | - | 1278 | WP_025381185.1 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| BF17_RS02310 () | 508879..509547 | - | 669 | WP_025381186.1 | prepilin peptidase | - |
| BF17_RS02315 () | 509544..510131 | - | 588 | WP_025381187.1 | pilus assembly protein PilX | - |
| BF17_RS02320 () | 510146..511246 | - | 1101 | WP_080984345.1 | type II secretion system F family protein | - |
| BF17_RS02325 () | 511248..512801 | - | 1554 | WP_025381189.1 | Flp pilus assembly complex ATPase component TadA | - |
| BF17_RS02330 () | 512811..513305 | - | 495 | WP_012105809.1 | type IV pilus biogenesis protein PilP | - |
| BF17_RS02335 () | 513292..514629 | - | 1338 | WP_025381190.1 | type 4b pilus protein PilO2 | - |
| BF17_RS02340 () | 514632..516224 | - | 1593 | Protein_451 | PilN family type IVB pilus formation outer membrane protein | - |
| BF17_RS02345 () | 516238..516675 | - | 438 | WP_012105812.1 | type IV pilus biogenesis protein PilM | - |
| BF17_RS02350 () | 516677..517747 | - | 1071 | WP_025381191.1 | TcpQ domain-containing protein | - |
| BF17_RS02355 () | 517885..518271 | - | 387 | WP_012105814.1 | type II toxin-antitoxin system VapC family toxin | - |
| BF17_RS02360 () | 518268..518501 | - | 234 | WP_012105815.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | - |
| BF17_RS02365 () | 518672..519103 | - | 432 | WP_025381192.1 | DUF29 domain-containing protein | - |
| BF17_RS02370 () | 519306..519800 | - | 495 | WP_048677710.1 | DUF3577 domain-containing protein | - |
| BF17_RS02375 () | 520149..520907 | - | 759 | WP_012105819.1 | TIGR03761 family integrating conjugative element protein | - |
| BF17_RS02380 () | 521067..522266 | - | 1200 | WP_025381193.1 | helix-turn-helix domain-containing protein | - |
| BF17_RS02385 () | 522502..522732 | - | 231 | WP_025381194.1 | hypothetical protein | - |
| BF17_RS02390 () | 522732..523313 | - | 582 | WP_025381195.1 | DUF2857 domain-containing protein | - |
| BF17_RS02395 () | 523310..524992 | - | 1683 | WP_025381196.1 | ParB family protein | - |
| BF17_RS02400 () | 524985..526346 | - | 1362 | WP_025381197.1 | replicative DNA helicase | - |
| BF17_RS02405 () | 526339..527220 | - | 882 | WP_025381198.1 | ParA family protein | - |
| BF17_RS02410 () | 527571..528533 | - | 963 | WP_025381199.1 | site-specific integrase | - |
| BF17_RS02415 () | 528639..528866 | - | 228 | WP_080357484.1 | hypothetical protein | - |
| BF17_RS23090 () | 528853..529038 | - | 186 | WP_071825427.1 | host cell division inhibitor Icd-like protein | - |
| BF17_RS25520 () | 529219..529392 | + | 174 | WP_144236045.1 | hypothetical protein | - |
| BF17_RS02420 () | 529847..531079 | - | 1233 | WP_038401990.1 | TraI domain-containing protein | - |
| BF17_RS02425 () | 531433..531723 | - | 291 | WP_144236105.1 | TA system toxin CbtA family protein | - |
| BF17_RS02430 () | 531775..532773 | - | 999 | WP_025381204.1 | DUF1738 domain-containing protein | - |
| BF17_RS02435 () | 532920..533342 | - | 423 | WP_025381205.1 | antirestriction protein | - |
| BF17_RS02440 () | 533697..534593 | - | 897 | WP_025381206.1 | integrase domain-containing protein | - |
| BF17_RS02445 () | 535903..536823 | - | 921 | WP_025381207.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| BF17_RS25295 () | 536904..537245 | + | 342 | WP_158499225.1 | hypothetical protein | - |
| BF17_RS02455 () | 537220..537564 | + | 345 | WP_025381209.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| BF17_RS02460 () | 537566..537883 | + | 318 | WP_025381210.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| BF17_RS25525 () | 537955..538125 | - | 171 | WP_167330747.1 | hypothetical protein | - |
| BF17_RS02465 () | 538266..538472 | + | 207 | WP_025381211.1 | host cell division inhibitor Icd-like protein | - |
| BF17_RS02470 () | 538462..538794 | + | 333 | WP_025381212.1 | hypothetical protein | - |
| BF17_RS02475 () | 539519..539737 | + | 219 | WP_025381213.1 | hypothetical protein | - |
| BF17_RS02480 () | 539776..541287 | - | 1512 | WP_025381214.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| BF17_RS02485 () | 541287..541637 | - | 351 | WP_025381215.1 | hypothetical protein | - |
| BF17_RS02490 () | 541640..543061 | - | 1422 | WP_025381216.1 | integrating conjugative element protein | - |
| BF17_RS02495 () | 543085..544038 | - | 954 | WP_025381217.1 | TIGR03756 family integrating conjugative element protein | - |
| BF17_RS02500 () | 544035..544388 | - | 354 | WP_048677701.1 | TIGR03757 family integrating conjugative element protein | - |
| BF17_RS02515 () | 545948..546706 | - | 759 | WP_025381221.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| BF17_RS02520 () | 546717..548786 | - | 2070 | WP_025381222.1 | type IV conjugative transfer system coupling protein TraD | - |
| BF17_RS02525 () | 548929..549465 | - | 537 | WP_048677822.1 | integrating conjugative element protein | - |
| BF17_RS02530 () | 549462..550124 | - | 663 | WP_081761358.1 | TIGR03759 family integrating conjugative element protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|