MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 147222 bp
Accession: NZ_CP007230 Location: 3347758..3494979 Organism: Yersinia similis strain Y_sim_228 Replicon: chromosome
Accession: NZ_CP007230 Location: 3347758..3494979 Organism: Yersinia similis strain Y_sim_228 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BF17_RS15095 () | 3343112..3343957 | + | 846 | WP_025383275.1 | DMT family transporter | - |
| BF17_RS15100 () | 3344131..3344799 | - | 669 | WP_002211370.1 | arginine ABC transporter permease ArtM | - |
| BF17_RS15105 () | 3344799..3345515 | - | 717 | WP_002211369.1 | arginine ABC transporter permease ArtQ | - |
| BF17_RS15110 () | 3345527..3346258 | - | 732 | WP_025383276.1 | arginine ABC transporter substrate-binding protein | - |
| BF17_RS15115 () | 3346279..3347007 | - | 729 | WP_012105392.1 | arginine ABC transporter ATP-binding protein ArtP | - |
| BF17_RS15120 () | 3347302..3347862 | - | 561 | WP_025383277.1 | chorismate mutase | - |
| BF17_RS15125 () | 3348032..3348607 | - | 576 | WP_025383278.1 | lipoprotein | - |
| BF17_RS15130 () | 3348704..3349711 | - | 1008 | WP_025383279.1 | NAD(P)-dependent oxidoreductase | - |
| BF17_RS15135 () | 3349811..3351301 | - | 1491 | WP_025383280.1 | DUF2867 domain-containing protein | - |
| BF17_RS15140 () | 3351298..3352317 | - | 1020 | WP_025383281.1 | low-specificity L-threonine aldolase | - |
| BF17_RS15145 () | 3352562..3354283 | - | 1722 | WP_025383282.1 | ubiquinone-dependent pyruvate dehydrogenase | - |
| BF17_RS15150 () | 3354427..3355449 | - | 1023 | WP_025383283.1 | NADH oxidoreductase | - |
| BF17_RS15155 () | 3355561..3357213 | - | 1653 | WP_025383284.1 | hydroxylamine reductase | - |
| BF17_RS15160 () | 3357414..3358310 | - | 897 | WP_025383285.1 | lysine exporter LysO family protein | - |
| BF17_RS15165 () | 3358662..3360329 | + | 1668 | WP_025383286.1 | ATP-dependent endonuclease | - |
| BF17_RS15170 () | 3360504..3361451 | - | 948 | WP_025383287.1 | VirK/YbjX family protein | - |
| BF17_RS15175 () | 3361476..3361655 | - | 180 | WP_025383288.1 | hypothetical protein | - |
| BF17_RS15180 () | 3361687..3362799 | + | 1113 | WP_025383289.1 | macrolide transporter subunit MacA | - |
| BF17_RS15185 () | 3362799..3364748 | + | 1950 | WP_025383290.1 | macrolide ABC transporter ATP-binding protein/permease MacB | - |
| BF17_RS15190 () | 3364979..3365242 | - | 264 | WP_002211350.1 | cold shock-like protein CspD | - |
| BF17_RS15195 () | 3365603..3365923 | + | 321 | WP_002211349.1 | ATP-dependent Clp protease adapter ClpS | - |
| BF17_RS15200 () | 3365949..3368225 | + | 2277 | WP_025383291.1 | ATP-dependent Clp protease ATP-binding subunit ClpA | - |
| BF17_RS15205 () | 3368495..3368713 | - | 219 | WP_002211347.1 | translation initiation factor IF-1 | - |
| BF17_RS15210 () | 3368879..3369589 | - | 711 | WP_025383292.1 | leucyl/phenylalanyl-tRNA--protein transferase | - |
| BF17_RS15215 () | 3369770..3371494 | - | 1725 | WP_025383293.1 | cysteine/glutathione ABC transporter ATP-binding protein/permease CydC | - |
| BF17_RS15220 () | 3371497..3373263 | - | 1767 | WP_025383294.1 | cysteine/glutathione ABC transporter permease/ATP-binding protein CydD | - |
| BF17_RS15230 () | 3373703..3374665 | - | 963 | WP_025383295.1 | thioredoxin-disulfide reductase | - |
| BF17_RS15235 () | 3375433..3375927 | + | 495 | WP_025383296.1 | leucine-responsive transcriptional regulator Lrp | - |
| BF17_RS15240 () | 3376050..3379889 | + | 3840 | WP_025383297.1 | DNA translocase FtsK | - |
| BF17_RS15245 () | 3380081..3380689 | + | 609 | WP_025383298.1 | outer membrane lipoprotein chaperone LolA | - |
| BF17_RS15250 () | 3380700..3382043 | + | 1344 | WP_038402183.1 | replication-associated recombination protein A | - |
| BF17_RS15255 () | 3382285..3383577 | + | 1293 | WP_025383300.1 | serine--tRNA ligase | - |
| BF17_RS15260 () | 3383801..3384949 | + | 1149 | WP_025383301.1 | MFS transporter | - |
| BF17_RS15265 () | 3385120..3385854 | - | 735 | WP_025383302.1 | pyruvate formate lyase 1-activating protein | - |
| BF17_RS15270 () | 3386826..3387500 | + | 675 | WP_025383303.1 | glycosyltransferase family 25 protein | - |
| BF17_RS15275 () | 3387618..3389900 | - | 2283 | WP_025383304.1 | formate C-acetyltransferase | - |
| BF17_RS15280 () | 3389956..3390813 | - | 858 | WP_025383305.1 | formate transporter FocA | - |
| BF17_RS15285 () | 3391491..3393257 | - | 1767 | WP_025383306.1 | YcaO-like family protein | - |
| BF17_RS15290 () | 3393406..3394443 | + | 1038 | WP_025383307.1 | L-asparaginase 2 | - |
| BF17_RS15295 () | 3394761..3395855 | + | 1095 | WP_025383308.1 | YadA-like family protein | - |
| BF17_RS15300 () | 3395876..3397723 | + | 1848 | WP_025383309.1 | YadA-like family protein | - |
| BF17_RS15305 () | 3398109..3399194 | + | 1086 | WP_025383310.1 | 3-phosphoserine/phosphohydroxythreonine transaminase | - |
| BF17_RS15310 () | 3399357..3400643 | + | 1287 | WP_025383311.1 | 3-phosphoshikimate 1-carboxyvinyltransferase | - |
| BF17_RS15315 () | 3400960..3401652 | + | 693 | WP_025383312.1 | (d)CMP kinase | - |
| BF17_RS15320 () | 3401826..3403499 | + | 1674 | WP_011192057.1 | 30S ribosomal protein S1 | - |
| BF17_RS15325 () | 3403563..3403847 | + | 285 | WP_002211322.1 | integration host factor subunit beta | - |
| BF17_RS15330 () | 3404353..3406641 | + | 2289 | WP_025383313.1 | ComEC family protein | - |
| BF17_RS15335 () | 3406677..3408425 | + | 1749 | WP_025383314.1 | lipid A ABC transporter ATP-binding protein/permease MsbA | - |
| BF17_RS15340 () | 3408422..3409408 | + | 987 | WP_025383315.1 | tetraacyldisaccharide 4'-kinase | - |
| BF17_RS15345 () | 3409421..3410824 | - | 1404 | WP_025383316.1 | VOC family protein | - |
| BF17_RS15350 () | 3411542..3411751 | + | 210 | WP_025383317.1 | cold-shock protein | - |
| BF17_RS15355 () | 3412036..3412218 | + | 183 | WP_002211315.1 | hypothetical protein | - |
| BF17_RS15360 () | 3412215..3412967 | + | 753 | WP_025383318.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| BF17_RS15365 () | 3413311..3414204 | + | 894 | WP_025383319.1 | YcbJ family phosphotransferase | - |
| BF17_RS15375 () | 3414999..3415784 | + | 786 | WP_025383320.1 | tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM | - |
| BF17_RS15380 () | 3415781..3417103 | + | 1323 | WP_025383321.1 | chromosome partition protein MukF | - |
| BF17_RS15385 () | 3417084..3417812 | + | 729 | WP_002211309.1 | chromosome partition protein MukE | - |
| BF17_RS15390 () | 3417809..3422266 | + | 4458 | WP_025383322.1 | chromosome partition protein MukB | - |
| BF17_RS15395 () | 3422480..3422944 | + | 465 | WP_144236078.1 | IS200/IS605 family transposase | - |
| BF17_RS25385 () | 3423025..3423186 | - | 162 | WP_158499218.1 | hypothetical protein | - |
| BF17_RS15400 () | 3423253..3423588 | - | 336 | WP_025383323.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| BF17_RS15405 () | 3423582..3423788 | - | 207 | WP_025381517.1 | hypothetical protein | - |
| BF17_RS15410 () | 3424098..3424667 | - | 570 | WP_025383324.1 | hypothetical protein | - |
| BF17_RS15415 () | 3424679..3425113 | - | 435 | WP_025383325.1 | hypothetical protein | - |
| BF17_RS15420 () | 3425886..3426350 | + | 465 | WP_144236079.1 | IS200/IS605 family transposase | - |
| BF17_RS15425 () | 3426627..3428483 | + | 1857 | WP_025383326.1 | L,D-transpeptidase | - |
| BF17_RS15430 () | 3428676..3429224 | + | 549 | WP_025383327.1 | YcbK family protein | - |
| BF17_RS15435 () | 3429285..3429932 | + | 648 | WP_025383328.1 | MBL fold metallo-hydrolase | - |
| BF17_RS25835 () | 3430095..3430163 | - | 69 | Protein_2946 | gluconate 5-dehydrogenase | - |
| BF17_RS15440 () | 3430317..3431507 | - | 1191 | WP_025383329.1 | aspartate/tyrosine/aromatic aminotransferase | - |
| BF17_RS15445 () | 3431764..3432843 | - | 1080 | WP_162471862.1 | porin OmpF | - |
| BF17_RS15450 () | 3433144..3434544 | - | 1401 | WP_002211301.1 | asparagine--tRNA ligase | - |
| BF17_RS15455 () | 3435006..3436211 | - | 1206 | WP_025383331.1 | nicotinate phosphoribosyltransferase | - |
| BF17_RS15465 () | 3437032..3439647 | + | 2616 | WP_025383333.1 | aminopeptidase N | - |
| BF17_RS15470 () | 3440258..3441268 | + | 1011 | WP_025383334.1 | quinone-dependent dihydroorotate dehydrogenase | - |
| BF17_RS15475 () | 3441441..3441992 | + | 552 | WP_025383335.1 | cell division protein ZapC | - |
| BF17_RS15480 () | 3442018..3443130 | - | 1113 | WP_025383336.1 | YcbX family protein | - |
| BF17_RS15485 () | 3443230..3445350 | + | 2121 | WP_025383337.1 | bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL | - |
| BF17_RS15490 () | 3445356..3447269 | + | 1914 | WP_025383338.1 | ABC transporter ATP-binding protein | - |
| BF17_RS15495 () | 3447398..3448684 | + | 1287 | WP_025383339.1 | membrane integrity-associated transporter subunit PqiA | - |
| BF17_RS15500 () | 3448671..3450323 | + | 1653 | WP_025383340.1 | intermembrane transport protein PqiB | - |
| BF17_RS15505 () | 3450320..3450880 | + | 561 | WP_025383341.1 | membrane integrity-associated transporter subunit PqiC | - |
| BF17_RS15515 () | 3451151..3451318 | + | 168 | WP_038402188.1 | ribosome modulation factor | - |
| BF17_RS15520 () | 3451381..3452655 | - | 1275 | WP_025383342.1 | beta-ketoacyl-ACP synthase II | - |
| BF17_RS15525 () | 3452901..3453089 | + | 189 | WP_038402189.1 | hypothetical protein | - |
| BF17_RS15530 () | 3453301..3453819 | - | 519 | WP_025383343.1 | bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase | - |
| BF17_RS15535 () | 3453888..3455639 | - | 1752 | WP_038402625.1 | AAA family ATPase | - |
| BF17_RS15540 () | 3455850..3456305 | + | 456 | WP_025383345.1 | macrodomain Ter protein MatP | - |
| BF17_RS15545 () | 3456409..3457470 | - | 1062 | WP_002213066.1 | porin OmpA | - |
| BF17_RS15550 () | 3457828..3458334 | - | 507 | WP_025383346.1 | cell division inhibitor SulA | - |
| BF17_RS15555 () | 3458563..3459216 | + | 654 | WP_025383347.1 | TfoX/Sxy family DNA transformation protein | - |
| BF17_RS15560 () | 3459282..3461417 | - | 2136 | WP_025383348.1 | TIGR01666 family membrane protein | - |
| BF17_RS15565 () | 3461447..3461893 | - | 447 | WP_025383349.1 | YccF domain-containing protein | - |
| BF17_RS15570 () | 3462087..3464141 | + | 2055 | WP_025383350.1 | DNA helicase IV | - |
| BF17_RS15575 () | 3464204..3464662 | - | 459 | WP_025383351.1 | methylglyoxal synthase | - |
| BF17_RS15580 () | 3464841..3465521 | - | 681 | WP_025383352.1 | DUF2057 family protein | - |
| BF17_RS15585 () | 3465835..3466251 | + | 417 | WP_025383353.1 | CoA-binding protein | - |
| BF17_RS15590 () | 3466371..3466688 | - | 318 | WP_025383354.1 | heat shock protein HspQ | - |
| BF17_RS15595 () | 3466749..3467939 | - | 1191 | WP_025383355.1 | 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI | - |
| BF17_RS15600 () | 3468001..3469062 | - | 1062 | WP_025383356.1 | phage integrase Arm DNA-binding domain-containing protein | - |
| BF17_RS15605 () | 3469001..3469324 | - | 324 | WP_048677086.1 | hypothetical protein | - |
| BF17_RS15610 () | 3469617..3469880 | - | 264 | WP_025383358.1 | hypothetical protein | - |
| BF17_RS15615 () | 3469910..3470173 | - | 264 | WP_025383359.1 | hypothetical protein | - |
| BF17_RS25390 () | 3470163..3470333 | - | 171 | WP_155483252.1 | hypothetical protein | - |
| BF17_RS15620 () | 3470346..3470633 | - | 288 | WP_025383360.1 | hypothetical protein | - |
| BF17_RS25745 () | 3470645..3471202 | - | 558 | WP_025383361.1 | hypothetical protein | - |
| BF17_RS15630 () | 3471202..3471540 | - | 339 | WP_025383362.1 | hypothetical protein | - |
| BF17_RS15635 () | 3471665..3471982 | - | 318 | WP_025383363.1 | hypothetical protein | - |
| BF17_RS15640 () | 3472056..3472748 | - | 693 | WP_025383364.1 | hypothetical protein | - |
| BF17_RS15645 () | 3473402..3473908 | - | 507 | WP_025383365.1 | single-stranded DNA-binding protein | - |
| BF17_RS15650 () | 3473909..3474538 | - | 630 | WP_025383366.1 | ERF family protein | - |
| BF17_RS25610 () | 3474547..3474717 | - | 171 | WP_167330751.1 | hypothetical protein | - |
| BF17_RS25055 () | 3474821..3474952 | - | 132 | WP_144236081.1 | protease FtsH-inhibitory lysogeny factor CIII | - |
| BF17_RS15655 () | 3474970..3475941 | - | 972 | WP_025383367.1 | hypothetical protein | - |
| BF17_RS15660 () | 3476177..3476491 | - | 315 | WP_025383368.1 | hypothetical protein | - |
| BF17_RS15665 () | 3476528..3476710 | - | 183 | WP_025383369.1 | hypothetical protein | - |
| BF17_RS15670 () | 3476729..3476932 | - | 204 | WP_025383370.1 | hypothetical protein | - |
| BF17_RS15680 () | 3477653..3478600 | - | 948 | WP_025383372.1 | hypothetical protein | - |
| BF17_RS15685 () | 3478761..3479438 | - | 678 | WP_025383373.1 | helix-turn-helix transcriptional regulator | - |
| BF17_RS15690 () | 3479537..3479764 | + | 228 | WP_025383374.1 | helix-turn-helix transcriptional regulator | - |
| BF17_RS15695 () | 3479874..3480167 | + | 294 | WP_025383375.1 | hypothetical protein | - |
| BF17_RS15700 () | 3480176..3480712 | + | 537 | WP_025383376.1 | hypothetical protein | - |
| BF17_RS15705 () | 3480801..3481397 | + | 597 | WP_025383377.1 | hypothetical protein | - |
| BF17_RS15710 () | 3481394..3482230 | + | 837 | WP_025383378.1 | replication protein | - |
| BF17_RS15715 () | 3482233..3483081 | + | 849 | WP_081761335.1 | ATP-binding protein | - |
| BF17_RS15720 () | 3483078..3483359 | + | 282 | WP_144236082.1 | hypothetical protein | - |
| BF17_RS15725 () | 3483537..3483989 | + | 453 | WP_025383381.1 | DUF551 domain-containing protein | - |
| BF17_RS15730 () | 3483986..3484336 | + | 351 | WP_025383382.1 | hypothetical protein | - |
| BF17_RS15735 () | 3484336..3484797 | + | 462 | WP_025383383.1 | recombination protein NinB | - |
| BF17_RS15740 () | 3484871..3485476 | + | 606 | WP_025383384.1 | recombination protein NinG | - |
| BF17_RS15745 () | 3485473..3485961 | + | 489 | WP_025383385.1 | antiterminator | - |
| BF17_RS15750 () | 3486224..3486655 | - | 432 | WP_012303803.1 | hypothetical protein | - |
| BF17_RS15755 () | 3486860..3487192 | + | 333 | WP_025383386.1 | phage holin, lambda family | - |
| BF17_RS15760 () | 3487179..3487583 | + | 405 | WP_174407871.1 | M15 family metallopeptidase | - |
| BF17_RS25060 () | 3487786..3488175 | + | 390 | WP_025383389.1 | hypothetical protein | - |
| BF17_RS23935 () | 3488535..3489152 | + | 618 | WP_167330752.1 | terminase small subunit | - |
| BF17_RS15790 () | 3489476..3489652 | + | 177 | WP_025383392.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| BF17_RS15795 () | 3489703..3490110 | + | 408 | WP_025383393.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| BF17_RS15800 () | 3490166..3491770 | + | 1605 | WP_025383394.1 | terminase large subunit | - |
| BF17_RS15805 () | 3492023..3493555 | + | 1533 | WP_038402629.1 | DUF1073 domain-containing protein | - |
| BF17_RS15810 () | 3493512..3494393 | + | 882 | WP_038402194.1 | head morphogenesis protein SPP1 | - |
| BF17_RS15815 () | 3494386..3495534 | + | 1149 | WP_025383395.1 | DUF2213 domain-containing protein | - |
| BF17_RS22880 () | 3495534..3496025 | + | 492 | WP_025383396.1 | hypothetical protein | - |
| BF17_RS15825 () | 3496039..3497172 | + | 1134 | WP_025383397.1 | DUF2184 domain-containing protein | - |
| BF17_RS15830 () | 3497201..3497599 | + | 399 | WP_144236084.1 | hypothetical protein | - |
| BF17_RS15835 () | 3497609..3498040 | + | 432 | WP_048677239.1 | DUF4054 domain-containing protein | - |
| BF17_RS15840 () | 3498040..3498537 | + | 498 | WP_025383400.1 | hypothetical protein | - |
| BF17_RS15845 () | 3498537..3498920 | + | 384 | WP_025383401.1 | hypothetical protein | - |
| BF17_RS15850 () | 3498910..3499449 | + | 540 | WP_025383402.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|