MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 40746 bp
Accession: NZ_CP007230 Location: 2896713..2937458 Organism: Yersinia similis strain Y_sim_228 Replicon: chromosome
Accession: NZ_CP007230 Location: 2896713..2937458 Organism: Yersinia similis strain Y_sim_228 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BF17_RS12890 () | 2892088..2892810 | - | 723 | WP_025382907.1 | UDP-2,3-diacylglucosamine diphosphatase | - |
| BF17_RS12895 () | 2892821..2893315 | - | 495 | WP_025382908.1 | peptidylprolyl isomerase B | - |
| BF17_RS12900 () | 2893526..2894911 | + | 1386 | WP_025382909.1 | cysteine--tRNA ligase | - |
| BF17_RS12905 () | 2895132..2895344 | - | 213 | WP_025382910.1 | ribosome-associated protein YbcJ | - |
| BF17_RS12910 () | 2895359..2896225 | - | 867 | WP_025382911.1 | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD | - |
| BF17_RS12920 () | 2896713..2897909 | + | 1197 | WP_025382912.1 | tyrosine-type recombinase/integrase | - |
| BF17_RS12925 () | 2898426..2900759 | - | 2334 | WP_025382913.1 | AAA family ATPase | - |
| BF17_RS12930 () | 2900734..2901399 | - | 666 | WP_025382914.1 | hypothetical protein | - |
| BF17_RS12935 () | 2901380..2902612 | - | 1233 | WP_025382915.1 | hypothetical protein | - |
| BF17_RS12940 () | 2903078..2905210 | + | 2133 | WP_025382916.1 | AAA family ATPase | - |
| BF17_RS12945 () | 2905213..2907009 | + | 1797 | WP_025382917.1 | ATP-dependent helicase | - |
| BF17_RS12950 () | 2907322..2908071 | - | 750 | WP_025382918.1 | porin family protein | - |
| BF17_RS25365 () | 2908323..2908469 | - | 147 | WP_156170248.1 | hypothetical protein | - |
| BF17_RS12955 () | 2908619..2909272 | - | 654 | WP_174407868.1 | inovirus Gp2 family protein | - |
| BF17_RS12960 () | 2909654..2910250 | - | 597 | WP_025382920.1 | hypothetical protein | - |
| BF17_RS12965 () | 2910348..2910554 | - | 207 | WP_025382921.1 | AlpA family transcriptional regulator | - |
| BF17_RS23745 () | 2911637..2912278 | + | 642 | Protein_2480 | hypothetical protein | - |
| BF17_RS12975 () | 2912412..2913287 | + | 876 | WP_025382923.1 | GTPase family protein | - |
| BF17_RS12980 () | 2913500..2914201 | + | 702 | WP_025382924.1 | WYL domain-containing protein | - |
| BF17_RS12985 () | 2914207..2914854 | + | 648 | WP_025382925.1 | hypothetical protein | - |
| BF17_RS12990 () | 2914886..2915338 | + | 453 | WP_025382926.1 | hypothetical protein | - |
| BF17_RS12995 () | 2915377..2915787 | + | 411 | WP_158499227.1 | hypothetical protein | - |
| BF17_RS13000 () | 2915911..2916732 | + | 822 | WP_025382928.1 | DUF945 domain-containing protein | - |
| BF17_RS13005 () | 2916959..2917390 | + | 432 | WP_025382929.1 | antirestriction protein | - |
| BF17_RS13010 () | 2917422..2917895 | + | 474 | WP_025382930.1 | DNA repair protein RadC | - |
| BF17_RS13015 () | 2917889..2918221 | + | 333 | WP_025382931.1 | hypothetical protein | - |
| BF17_RS13020 () | 2918276..2918647 | + | 372 | WP_025382932.1 | TA system toxin CbtA family protein | Toxin Detail |
| BF17_RS13025 () | 2918644..2918976 | + | 333 | WP_025382933.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| BF17_RS13030 () | 2919061..2919915 | + | 855 | WP_025382934.1 | DUF4942 domain-containing protein | - |
| BF17_RS23750 () | 2920048..2920494 | - | 447 | WP_050103421.1 | tyrosine-type recombinase/integrase | - |
| BF17_RS13040 () | 2920874..2921506 | + | 633 | WP_025382936.1 | hypothetical protein | - |
| BF17_RS13045 () | 2921871..2922176 | + | 306 | WP_025382937.1 | hypothetical protein | - |
| BF17_RS13050 () | 2922434..2922756 | - | 323 | Protein_2496 | class I SAM-dependent methyltransferase | - |
| BF17_RS23755 () | 2922818..2923075 | - | 258 | WP_071825484.1 | YjhX family toxin | - |
| BF17_RS13060 () | 2923304..2923748 | + | 445 | Protein_2498 | hypothetical protein | - |
| BF17_RS13065 () | 2923828..2926209 | - | 2382 | WP_025382940.1 | glycoside hydrolase family 3 C-terminal domain-containing protein | - |
| BF17_RS13070 () | 2926299..2926829 | - | 531 | WP_025382941.1 | GDYXXLXY domain-containing protein | - |
| BF17_RS13075 () | 2926822..2929029 | - | 2208 | WP_025382942.1 | DUF4401 domain-containing protein | - |
| BF17_RS13080 () | 2929383..2930255 | + | 873 | WP_025382943.1 | 23S rRNA pseudouridine(2604) synthase RluF | - |
| BF17_RS13085 () | 2930466..2931587 | + | 1122 | WP_025382944.1 | cupin domain-containing protein | - |
| BF17_RS13090 () | 2931602..2932182 | - | 581 | Protein_2504 | AbiEi antitoxin N-terminal domain-containing protein | - |
| BF17_RS13095 () | 2932534..2934450 | - | 1917 | WP_025382946.1 | autotransporter adhesin YapC | - |
| BF17_RS13100 () | 2935266..2935505 | + | 240 | WP_025382947.1 | hypothetical protein | - |
| BF17_RS13105 () | 2935544..2935795 | + | 252 | WP_025382948.1 | hypothetical protein | - |
| BF17_RS13110 () | 2935819..2936298 | + | 480 | WP_025382949.1 | Hcp family type VI secretion system effector | - |
| BF17_RS13115 () | 2936403..2936804 | - | 402 | WP_038402154.1 | DUF1240 domain-containing protein | - |
| BF17_RS13120 () | 2937057..2937458 | - | 402 | WP_002209748.1 | DUF1240 domain-containing protein | - |
| BF17_RS22850 () | 2937451..2938322 | - | 872 | Protein_2511 | hypothetical protein | - |
| BF17_RS13130 () | 2938995..2939240 | + | 246 | WP_025382950.1 | helix-turn-helix domain-containing protein | - |
| BF17_RS13135 () | 2939453..2941816 | - | 2364 | WP_032466176.1 | penicillin-binding protein 1C | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|