MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 35364 bp
Accession: NZ_CP007184 Location: 1..35364 Organism: Campylobacter coli RM1875 Replicon: plasmid pRM1875_35kb
Accession: NZ_CP007184 Location: 1..35364 Organism: Campylobacter coli RM1875 Replicon: plasmid pRM1875_35kb
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| YSQ_RS09575 () | 22..861 | + | 840 | WP_025443350.1 | replication initiation protein | - |
| YSQ_RS09580 () | 878..1507 | - | 630 | WP_002814820.1 | hypothetical protein | - |
| YSQ_RS09585 () | 1517..2185 | - | 669 | WP_002814818.1 | ParA family protein | - |
| YSQ_RS09595 () | 2941..3276 | - | 336 | WP_025443351.1 | hypothetical protein | - |
| YSQ_RS09600 () | 3273..3587 | - | 315 | WP_025443352.1 | hypothetical protein | - |
| YSQ_RS09605 () | 3673..4056 | - | 384 | WP_025443353.1 | hypothetical protein | - |
| YSQ_RS09610 () | 4152..4664 | - | 513 | WP_025443354.1 | hypothetical protein | - |
| YSQ_RS09615 () | 4658..5143 | - | 486 | Protein_7 | hypothetical protein | - |
| YSQ_RS10110 () | 5147..5494 | - | 348 | WP_002815847.1 | hypothetical protein | - |
| YSQ_RS09625 () | 5528..5986 | - | 459 | WP_025443356.1 | single-stranded DNA-binding protein | - |
| YSQ_RS09630 () | 5991..6368 | - | 378 | WP_025443357.1 | hypothetical protein | - |
| YSQ_RS09635 () | 6576..8549 | - | 1974 | WP_025443358.1 | type IA DNA topoisomerase | - |
| YSQ_RS09640 () | 8571..9719 | - | 1149 | WP_025443359.1 | type IV secretion system protein | - |
| YSQ_RS09645 () | 9729..9998 | - | 270 | WP_025443360.1 | hypothetical protein | - |
| YSQ_RS09650 () | 10141..11022 | - | 882 | WP_025443361.1 | DUF1738 domain-containing protein | - |
| YSQ_RS10315 () | 11097..11267 | - | 171 | WP_011117554.1 | hypothetical protein | - |
| YSQ_RS09655 () | 11377..13263 | - | 1887 | WP_025443362.1 | type IV secretory system conjugative DNA transfer family protein | - |
| YSQ_RS09660 () | 13260..13667 | - | 408 | WP_025443363.1 | plasmid mobilization relaxosome protein MobC | - |
| YSQ_RS09665 () | 13677..14630 | - | 954 | WP_025443364.1 | CpaF/VirB11 family protein | - |
| YSQ_RS09670 () | 14620..14832 | - | 213 | WP_002815103.1 | hypothetical protein | - |
| YSQ_RS09675 () | 14843..15964 | - | 1122 | WP_025443365.1 | DNA type IV secretion system protein ComB10 | - |
| YSQ_RS09680 () | 15961..17034 | - | 1074 | WP_025443366.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| YSQ_RS09685 () | 17034..17711 | - | 678 | WP_025443367.1 | hypothetical protein | - |
| YSQ_RS10320 () | 17728..17856 | - | 129 | WP_002815096.1 | type IV secretion system protein VirB7 | - |
| YSQ_RS09690 () | 17856..20324 | - | 2469 | WP_025443368.1 | ATPase AAA | - |
| YSQ_RS09695 () | 20334..20576 | - | 243 | WP_025443369.1 | hypothetical protein | - |
| YSQ_RS09700 () | 20576..20884 | - | 309 | WP_025443370.1 | hypothetical protein | - |
| YSQ_RS09705 () | 21569..23140 | + | 1572 | WP_025443371.1 | relaxase/mobilization nuclease domain-containing protein | - |
| YSQ_RS09710 () | 23367..23759 | - | 393 | WP_002814547.1 | hypothetical protein | - |
| YSQ_RS09715 () | 23873..24142 | - | 270 | WP_002815875.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| YSQ_RS09720 () | 24142..24429 | - | 288 | WP_002815874.1 | hypothetical protein | Antitoxin Detail |
| YSQ_RS09725 () | 24653..25015 | - | 363 | WP_025443372.1 | hypothetical protein | - |
| YSQ_RS09730 () | 25216..25581 | - | 366 | WP_002815629.1 | hypothetical protein | - |
| YSQ_RS09735 () | 25770..26072 | - | 303 | WP_025443373.1 | hypothetical protein | - |
| YSQ_RS09740 () | 26072..26503 | - | 432 | WP_025443374.1 | hypothetical protein | - |
| YSQ_RS09745 () | 26500..26916 | - | 417 | WP_025443375.1 | hypothetical protein | - |
| YSQ_RS09755 () | 27452..27670 | - | 219 | WP_025443376.1 | hypothetical protein | - |
| YSQ_RS09760 () | 27682..27987 | - | 306 | WP_025443377.1 | hypothetical protein | - |
| YSQ_RS09765 () | 28001..28345 | - | 345 | WP_011117579.1 | hypothetical protein | - |
| YSQ_RS09770 () | 28806..29234 | - | 429 | WP_025443378.1 | hypothetical protein | - |
| YSQ_RS09775 () | 29240..30472 | - | 1233 | WP_025443379.1 | toprim domain-containing protein | - |
| YSQ_RS09780 () | 30472..31212 | - | 741 | WP_025443380.1 | hypothetical protein | - |
| YSQ_RS09785 () | 31240..32025 | - | 786 | WP_025443381.1 | hypothetical protein | - |
| YSQ_RS09790 () | 32129..33085 | - | 957 | WP_025443382.1 | hypothetical protein | - |
| YSQ_RS09795 () | 33079..34193 | - | 1115 | Protein_44 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|