MGE detailed information
MGE type: Mobilizable plasmid MGE length: 64562 bp
Accession: NZ_CP007137 Location: 1..64562 Organism: Escherichia coli O145:H28 str. RM12581 Replicon: plasmid pRM12581
Accession: NZ_CP007137 Location: 1..64562 Organism: Escherichia coli O145:H28 str. RM12581 Replicon: plasmid pRM12581
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECRM12581_RS28520 () | 590..1573 | + | 984 | WP_000077458.1 | ParM/StbA family protein | - |
| ECRM12581_RS28525 () | 1590..1883 | + | 294 | WP_000919078.1 | hypothetical protein | - |
| ECRM12581_RS28530 () | 1885..2304 | + | 420 | WP_000651490.1 | H-NS histone family protein | - |
| ECRM12581_RS28535 () | 2364..2915 | - | 552 | WP_001020646.1 | hypothetical protein | - |
| ECRM12581_RS28540 () | 2912..3151 | - | 240 | Protein_5 | transcriptional regulator | - |
| ECRM12581_RS28550 () | 3208..4421 | + | 1214 | WP_200872248.1 | IS3 family transposase | - |
| ECRM12581_RS28555 () | 4465..4833 | - | 369 | Protein_7 | transcriptional regulator | - |
| ECRM12581_RS28560 () | 4844..5377 | - | 534 | WP_000790610.1 | transglycosylase SLT domain-containing protein | - |
| ECRM12581_RS28565 () | 5377..5649 | - | 273 | WP_000356489.1 | helix-turn-helix domain-containing protein | - |
| ECRM12581_RS28570 () | 6365..6727 | + | 363 | WP_000683483.1 | hypothetical protein | - |
| ECRM12581_RS28575 () | 6765..10379 | - | 3615 | WP_000534551.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| ECRM12581_RS28580 () | 10392..11825 | - | 1434 | WP_000256129.1 | conjugal transfer protein TraH | - |
| ECRM12581_RS28585 () | 11827..12639 | - | 813 | Protein_13 | conjugal transfer protein TraF | - |
| ECRM12581_RS28600 () | 13948..14181 | - | 234 | Protein_15 | conjugal transfer protein TraF | - |
| ECRM12581_RS28605 () | 14292..15803 | - | 1512 | WP_000811656.1 | ATP-dependent helicase | - |
| ECRM12581_RS28615 () | 16090..17130 | - | 1041 | WP_000101568.1 | DNA-binding protein | - |
| ECRM12581_RS28620 () | 17292..18167 | - | 876 | WP_001097010.1 | DNA replication terminus site-binding protein | - |
| ECRM12581_RS28630 () | 18524..19015 | - | 492 | WP_000139717.1 | hypothetical protein | - |
| ECRM12581_RS28635 () | 19012..19881 | - | 870 | WP_012728230.1 | 3'-5' exonuclease | - |
| ECRM12581_RS28640 () | 19886..20896 | - | 1011 | WP_000543934.1 | tyrosine-type recombinase/integrase | - |
| ECRM12581_RS28645 () | 20899..21435 | - | 537 | WP_000949433.1 | hypothetical protein | - |
| ECRM12581_RS28655 () | 21734..22015 | - | 282 | WP_000575657.1 | hypothetical protein | - |
| ECRM12581_RS28660 () | 22277..22549 | + | 273 | Protein_24 | hypothetical protein | - |
| ECRM12581_RS28665 () | 22613..23317 | + | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| ECRM12581_RS28670 () | 23537..24193 | - | 657 | WP_000268552.1 | hypothetical protein | - |
| ECRM12581_RS28675 () | 24193..25620 | - | 1428 | WP_000936897.1 | DNA cytosine methyltransferase | - |
| ECRM12581_RS28680 () | 25624..26124 | - | 501 | WP_000647188.1 | hypothetical protein | - |
| ECRM12581_RS28685 () | 26133..26444 | - | 312 | WP_001447539.1 | hypothetical protein | - |
| ECRM12581_RS28690 () | 26450..26881 | - | 432 | WP_001326170.1 | hypothetical protein | - |
| ECRM12581_RS28695 () | 26949..27623 | - | 675 | WP_000344149.1 | hypothetical protein | - |
| ECRM12581_RS35080 () | 27598..27879 | - | 282 | WP_000044823.1 | hypothetical protein | - |
| ECRM12581_RS28705 () | 27872..28249 | - | 378 | WP_001125904.1 | hypothetical protein | - |
| ECRM12581_RS34725 () | 28576..28719 | + | 144 | WP_000939033.1 | hypothetical protein | - |
| ECRM12581_RS28710 () | 28811..29446 | + | 636 | WP_000074431.1 | N-6 DNA methylase | - |
| ECRM12581_RS28715 () | 29499..29771 | - | 273 | WP_000703827.1 | helix-turn-helix domain-containing protein | - |
| ECRM12581_RS28720 () | 29820..31001 | - | 1182 | WP_001207227.1 | ParB/RepB/Spo0J family partition protein | - |
| ECRM12581_RS28725 () | 31005..31790 | - | 786 | WP_001151304.1 | ParA family protein | - |
| ECRM12581_RS28730 () | 31964..32275 | - | 312 | WP_000338945.1 | hypothetical protein | - |
| ECRM12581_RS28735 () | 32582..33397 | + | 816 | WP_001043260.1 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| ECRM12581_RS28740 () | 33458..34261 | + | 804 | WP_001082319.1 | aminoglycoside O-phosphotransferase APH(3'')-Ib | - |
| ECRM12581_RS28745 () | 34261..35097 | + | 837 | WP_000480968.1 | aminoglycoside O-phosphotransferase APH(6)-Id | - |
| ECRM12581_RS28755 () | 35403..35645 | + | 243 | WP_000844627.1 | transposase | - |
| ECRM12581_RS28760 () | 35677..36327 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| ECRM12581_RS28765 () | 36433..37632 | + | 1200 | WP_000804063.1 | tetracycline efflux MFS transporter Tet(A) | - |
| ECRM12581_RS34020 () | 37599..37787 | - | 189 | Protein_46 | IS91 family transposase | - |
| ECRM12581_RS28770 () | 37899..38204 | - | 306 | WP_001255015.1 | LysR family transcriptional regulator | - |
| ECRM12581_RS28775 () | 38232..39446 | - | 1215 | WP_012728216.1 | chloramphenicol/florfenicol efflux MFS transporter FloR | - |
| ECRM12581_RS35085 () | 39663..40109 | - | 447 | Protein_49 | DUF3363 domain-containing protein | - |
| ECRM12581_RS28785 () | 40578..42071 | - | 1494 | WP_001120888.1 | IS91-like element ISVsa3 family transposase | - |
| ECRM12581_RS28790 () | 42282..42506 | - | 225 | WP_000743213.1 | hypothetical protein | - |
| ECRM12581_RS28795 () | 42503..43240 | - | 738 | WP_001366550.1 | recombinase family protein | - |
| ECRM12581_RS34730 () | 43726..43866 | - | 141 | WP_001044210.1 | hypothetical protein | - |
| ECRM12581_RS28805 () | 43872..44576 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| ECRM12581_RS28810 () | 44641..44820 | - | 180 | Protein_55 | helix-turn-helix transcriptional regulator | - |
| ECRM12581_RS28815 () | 45127..45831 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| ECRM12581_RS28820 () | 46046..46543 | - | 498 | WP_000062185.1 | hypothetical protein | - |
| ECRM12581_RS28825 () | 46546..47034 | - | 489 | WP_001273096.1 | DUF1643 domain-containing protein | - |
| ECRM12581_RS28830 () | 47131..47466 | + | 336 | WP_000683476.1 | hypothetical protein | - |
| ECRM12581_RS28835 () | 47481..47951 | - | 471 | WP_001281821.1 | hypothetical protein | - |
| ECRM12581_RS33340 () | 47944..48315 | - | 372 | WP_000516916.1 | hypothetical protein | - |
| ECRM12581_RS33345 () | 48326..48520 | - | 195 | WP_000343597.1 | hypothetical protein | - |
| ECRM12581_RS28855 () | 48861..49409 | - | 549 | WP_001061574.1 | transcriptional regulator | - |
| ECRM12581_RS28860 () | 49572..49922 | + | 351 | WP_000270043.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| ECRM12581_RS28865 () | 49927..50229 | + | 303 | WP_000124640.1 | XRE family transcriptional regulator | Antitoxin Detail |
| ECRM12581_RS28870 () | 50256..50549 | - | 294 | WP_001239997.1 | chromosome segregation protein ParM | - |
| ECRM12581_RS28875 () | 50637..50909 | - | 273 | WP_001043047.1 | HU family DNA-binding protein | - |
| ECRM12581_RS28880 () | 50967..51494 | - | 528 | WP_001236377.1 | thermonuclease family protein | - |
| ECRM12581_RS28890 () | 51725..52582 | - | 858 | WP_001167032.1 | hypothetical protein | - |
| ECRM12581_RS28895 () | 52569..52799 | - | 231 | WP_000972663.1 | hypothetical protein | - |
| ECRM12581_RS28900 () | 52799..53317 | - | 519 | WP_000210756.1 | nitrite reductase | - |
| ECRM12581_RS28905 () | 53314..53760 | - | 447 | WP_000919345.1 | Fe3+-siderophore ABC transporter permease | - |
| ECRM12581_RS28910 () | 53760..54119 | - | 360 | WP_000422768.1 | hypothetical protein | - |
| ECRM12581_RS28915 () | 54176..54604 | - | 429 | WP_000591074.1 | hypothetical protein | - |
| ECRM12581_RS28920 () | 54638..55498 | - | 861 | WP_000139698.1 | DsbA family protein | - |
| ECRM12581_RS28925 () | 55514..56473 | - | 960 | WP_000829616.1 | S49 family peptidase | - |
| ECRM12581_RS28930 () | 56473..57327 | - | 855 | WP_000539392.1 | hypothetical protein | - |
| ECRM12581_RS28935 () | 57332..57625 | - | 294 | WP_001370730.1 | hypothetical protein | - |
| ECRM12581_RS28940 () | 57636..58109 | - | 474 | WP_000057877.1 | hypothetical protein | - |
| ECRM12581_RS28945 () | 58206..58727 | - | 522 | WP_000805800.1 | hypothetical protein | - |
| ECRM12581_RS28950 () | 58730..59251 | - | 522 | WP_000393785.1 | hypothetical protein | - |
| ECRM12581_RS28955 () | 59256..59864 | - | 609 | WP_000849071.1 | hypothetical protein | - |
| ECRM12581_RS28960 () | 60133..61248 | + | 1116 | WP_000946102.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| ECRM12581_RS28965 () | 61266..61700 | + | 435 | WP_000883925.1 | hypothetical protein | - |
| ECRM12581_RS28975 () | 62737..63837 | - | 1101 | WP_000350011.1 | plasmid replication protein | - |
| ECRM12581_RS28980 () | 63822..64109 | - | 288 | WP_000127321.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|