MGE detailed information
MGE type: Prophage MGE length: 51425 bp
Accession: NZ_CP007136 Location: 1738592..1790016 Organism: Escherichia coli O145:H28 str. RM12581 Replicon: chromosome
Accession: NZ_CP007136 Location: 1738592..1790016 Organism: Escherichia coli O145:H28 str. RM12581 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECRM12581_RS08840 () | 1734641..1735624 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| ECRM12581_RS08850 () | 1736102..1737475 | + | 1374 | WP_000123735.1 | ATP-dependent RNA helicase DbpA | - |
| ECRM12581_RS08855 () | 1737604..1738539 | - | 936 | WP_001157377.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| ECRM12581_RS30655 () | 1738592..1739827 | - | 1236 | WP_000040838.1 | Putative defective protein IntQ ; Integrase | Integrase |
| ECRM12581_RS08865 () | 1739829..1740044 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| ECRM12581_RS08870 () | 1740144..1740332 | - | 189 | WP_001298826.1 | DUF1187 family protein | - |
| - () | 1740148..1740326 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1740148..1740326 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1740148..1740326 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1740148..1740326 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| ECRM12581_RS08875 () | 1740325..1740519 | - | 195 | WP_021500490.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| ECRM12581_RS08880 () | 1740583..1741635 | - | 1053 | WP_001004423.1 | recombinase RecT | - |
| ECRM12581_RS08885 () | 1741647..1744772 | - | 3126 | WP_025404324.1 | exodeoxyribonuclease VIII | - |
| ECRM12581_RS08890 () | 1744874..1745149 | - | 276 | WP_001519830.1 | phage protein | - |
| ECRM12581_RS08895 () | 1745224..1745400 | - | 177 | WP_000245528.1 | hypothetical protein | - |
| ECRM12581_RS08900 () | 1745394..1745615 | - | 222 | WP_000560227.1 | cell division protein FtsZ | - |
| ECRM12581_RS30660 () | 1746211..1746393 | + | 183 | WP_032102321.1 | hypothetical protein | - |
| ECRM12581_RS08910 () | 1746394..1747032 | - | 639 | WP_025404325.1 | hypothetical protein | - |
| ECRM12581_RS08915 () | 1747044..1747196 | - | 153 | WP_000379546.1 | DUF1391 family protein | - |
| ECRM12581_RS08920 () | 1747502..1747921 | - | 420 | WP_000410105.1 | helix-turn-helix domain-containing protein | - |
| ECRM12581_RS08925 () | 1748018..1748260 | + | 243 | WP_001033914.1 | helix-turn-helix domain-containing protein | - |
| ECRM12581_RS08930 () | 1748257..1748679 | + | 423 | WP_000702023.1 | hypothetical protein | - |
| ECRM12581_RS08935 () | 1748692..1749561 | + | 870 | WP_000899742.1 | DUF1376 domain-containing protein | - |
| ECRM12581_RS08940 () | 1749568..1750314 | + | 747 | WP_025404326.1 | ATP-binding protein | - |
| ECRM12581_RS08945 () | 1750336..1751106 | + | 771 | WP_025404327.1 | DUF1627 domain-containing protein | - |
| ECRM12581_RS08950 () | 1751122..1751517 | + | 396 | WP_001118155.1 | DUF977 family protein | - |
| ECRM12581_RS08955 () | 1751575..1751931 | + | 357 | WP_000403779.1 | hypothetical protein | - |
| ECRM12581_RS08960 () | 1751980..1752192 | + | 213 | WP_000063625.1 | hypothetical protein | - |
| ECRM12581_RS08965 () | 1752256..1752600 | + | 345 | WP_029594466.1 | hypothetical protein | - |
| ECRM12581_RS08970 () | 1752597..1752950 | + | 354 | WP_000610382.1 | DUF551 domain-containing protein | - |
| ECRM12581_RS32700 () | 1753066..1753170 | + | 105 | WP_001278450.1 | hypothetical protein | - |
| ECRM12581_RS08980 () | 1753416..1753571 | + | 156 | WP_000813258.1 | type I toxin-antitoxin system Hok family toxin | - |
| ECRM12581_RS08985 () | 1754131..1754730 | + | 600 | WP_000940348.1 | DUF1367 family protein | - |
| ECRM12581_RS08990 () | 1754730..1755020 | + | 291 | WP_000228019.1 | DUF1364 domain-containing protein | - |
| ECRM12581_RS08995 () | 1755017..1755571 | + | 555 | WP_000640148.1 | DUF1133 family protein | - |
| ECRM12581_RS09000 () | 1755845..1756426 | + | 582 | WP_000211416.1 | ORF6N domain-containing protein | - |
| ECRM12581_RS34310 () | 1756670..1756867 | + | 198 | WP_000917763.1 | hypothetical protein | - |
| ECRM12581_RS09010 () | 1757002..1757715 | + | 714 | WP_000301789.1 | helix-turn-helix domain-containing protein | - |
| ECRM12581_RS09025 () | 1758166..1758597 | + | 432 | WP_000466957.1 | tellurite resistance TerB family protein | - |
| ECRM12581_RS09030 () | 1758594..1758849 | + | 256 | Protein_1693 | DUF3927 family protein | - |
| ECRM12581_RS09035 () | 1759169..1761019 | + | 1851 | WP_024247920.1 | SASA family carbohydrate esterase | - |
| ECRM12581_RS09040 () | 1761455..1761670 | + | 216 | WP_113706112.1 | class II holin family protein | - |
| ECRM12581_RS09045 () | 1761675..1762019 | + | 345 | WP_000731241.1 | YdfR family protein | - |
| ECRM12581_RS09050 () | 1762070..1762603 | + | 534 | WP_000992148.1 | lysozyme | - |
| ECRM12581_RS09055 () | 1762874..1763443 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| ECRM12581_RS34315 () | 1763443..1763589 | + | 147 | WP_000539795.1 | hypothetical protein | - |
| ECRM12581_RS34320 () | 1763812..1763997 | + | 186 | WP_001208680.1 | Rz1 family lipoprotein | - |
| ECRM12581_RS09070 () | 1764523..1764837 | + | 315 | WP_001302717.1 | PerC family transcriptional regulator | - |
| ECRM12581_RS09075 () | 1764919..1765143 | - | 225 | WP_001303940.1 | YlcI/YnfO family protein | - |
| ECRM12581_RS09085 () | 1765532..1766077 | + | 546 | WP_000453587.1 | DNA-packaging protein | - |
| ECRM12581_RS09090 () | 1766052..1767977 | + | 1926 | WP_001027330.1 | phage terminase large subunit family protein | - |
| ECRM12581_RS09095 () | 1767974..1768180 | + | 207 | WP_000198153.1 | gpW family protein | - |
| ECRM12581_RS09100 () | 1768177..1769778 | + | 1602 | WP_001443752.1 | phage portal protein | - |
| ECRM12581_RS09105 () | 1769759..1771078 | + | 1320 | WP_025404328.1 | S49 family peptidase | - |
| ECRM12581_RS09110 () | 1771088..1771420 | + | 333 | WP_001295978.1 | head decoration protein | - |
| ECRM12581_RS09115 () | 1771476..1772501 | + | 1026 | WP_000063258.1 | major capsid protein | - |
| ECRM12581_RS09120 () | 1772543..1772938 | + | 396 | WP_000158897.1 | DNA-packaging protein FI | - |
| ECRM12581_RS09125 () | 1772950..1773303 | + | 354 | WP_000752994.1 | head-tail joining protein | - |
| ECRM12581_RS09130 () | 1773315..1773893 | + | 579 | WP_000975099.1 | phage tail protein | - |
| ECRM12581_RS09135 () | 1773890..1774285 | + | 396 | WP_000683138.1 | phage minor tail U family protein | - |
| ECRM12581_RS09140 () | 1774293..1775033 | + | 741 | WP_001342267.1 | phage tail protein | - |
| ECRM12581_RS09145 () | 1775049..1775471 | + | 423 | WP_000479169.1 | phage minor tail protein G | - |
| ECRM12581_RS09150 () | 1775453..1775887 | + | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| ECRM12581_RS09155 () | 1775880..1778459 | + | 2580 | WP_025404251.1 | phage tail tape measure protein | - |
| ECRM12581_RS09160 () | 1778456..1778785 | + | 330 | WP_000847347.1 | phage tail protein | - |
| ECRM12581_RS09165 () | 1778785..1779483 | + | 699 | WP_001152619.1 | phage minor tail protein L | - |
| ECRM12581_RS09170 () | 1779489..1780232 | + | 744 | WP_000194780.1 | C40 family peptidase | - |
| ECRM12581_RS09175 () | 1780169..1780801 | + | 633 | WP_000090891.1 | tail assembly protein | - |
| ECRM12581_RS32715 () | 1780862..1784358 | + | 3497 | Protein_1722 | host specificity protein J | - |
| ECRM12581_RS09185 () | 1784429..1785028 | + | 600 | WP_001585354.1 | Outer membrane protein X | VF |
| ECRM12581_RS09190 () | 1785093..1786406 | + | 1314 | WP_038426835.1 | ISNCY family transposase KIS | Transposase |
| ECRM12581_RS09195 () | 1786408..1786677 | + | 270 | WP_001023407.1 | phage tail fiber C-terminal domain-containing protein | - |
| ECRM12581_RS09200 () | 1787046..1787288 | - | 243 | WP_001120551.1 | DinI-like family protein | - |
| ECRM12581_RS30735 () | 1787420..1787710 | + | 291 | Protein_1727 | MFS transporter | - |
| ECRM12581_RS09215 () | 1789030..1790016 | + | 987 | Protein_1729 | MHS family MFS transporter YdfJ | - |
| ECRM12581_RS09220 () | 1790106..1791566 | + | 1461 | WP_000527802.1 | mannitol dehydrogenase family protein | - |
| ECRM12581_RS09225 () | 1791602..1791805 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| ECRM12581_RS09230 () | 1791982..1792668 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| ECRM12581_RS09235 () | 1792757..1793503 | - | 747 | WP_000636575.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|