MGE detailed information
MGE type: Prophage MGE length: 65082 bp
Accession: NZ_CP007037 Location: 3035869..3100950 Organism: Shigella flexneri G1663 Replicon: chromosome
Accession: NZ_CP007037 Location: 3035869..3100950 Organism: Shigella flexneri G1663 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SF2A_RS16480 (3031438) | 3031438..3032004 | + | 567 | WP_001094817.1 | osmotic shock tolerance protein YggT | - |
| SF2A_RS16485 (3032001) | 3032001..3032291 | + | 291 | WP_001277222.1 | DUF167 family protein YggU | - |
| SF2A_RS16490 (3032299) | 3032299..3032892 | + | 594 | WP_001174735.1 | XTP/dITP diphosphatase | - |
| SF2A_RS16495 (3032885) | 3032885..3034021 | + | 1137 | WP_000239924.1 | radical SAM family heme chaperone HemW | - |
| SF2A_RS16500 (3034335) | 3034335..3035298 | + | 964 | Protein_3016 | TRAP transporter substrate-binding protein | - |
| SF2A_RS16505 (3035343) | 3035343..3035846 | + | 504 | WP_000577041.1 | TRAP transporter small permease | - |
| SF2A_RS28120 (3035869) | 3035869..3036553 | - | 685 | Protein_3018 | IS1 family transposase | - |
| SF2A_RS16520 (3036610) | 3036610..3037911 | + | 1302 | WP_000378934.1 | TRAP transporter large permease subunit | - |
| SF2A_RS16525 (3038012) | 3038012..3038974 | - | 963 | WP_000745204.1 | DUF1202 family protein | - |
| SF2A_RS16530 (3039091) | 3039091..3040137 | - | 1047 | WP_000394115.1 | L-asparaginase 2 | - |
| SF2A_RS16535 (3040313) | 3040313..3041032 | - | 720 | WP_000984792.1 | DUF2884 domain-containing protein | - |
| SF2A_RS16545 (3041216) | 3041216..3041542 | - | 327 | WP_001107556.1 | YggL family protein | - |
| SF2A_RS16550 (3041542) | 3041542..3042261 | - | 720 | WP_000786911.1 | tRNA (guanosine(46)-N7)-methyltransferase TrmB | - |
| SF2A_RS16555 (3042422) | 3042422..3043474 | + | 1053 | WP_004972828.1 | A/G-specific adenine glycosylase | - |
| SF2A_RS16560 (3043502) | 3043502..3043777 | + | 276 | WP_000091700.1 | oxidative damage protection protein | - |
| SF2A_RS16565 (3043842) | 3043842..3044921 | + | 1080 | WP_005064048.1 | hypothetical protein | VF |
| SF2A_RS16570 (3045123) | 3045123..3046379 | + | 1257 | WP_001049791.1 | nucleoside permease NupG | - |
| SF2A_RS16575 (3046428) | 3046428..3048563 | - | 2136 | WP_005099260.1 | ornithine decarboxylase | - |
| SF2A_RS30970 (3048725) | 3048725..3048808 | - | 84 | WP_211180506.1 | protein YqgH | - |
| SF2A_RS16580 (3048961) | 3048961..3049668 | + | 708 | WP_000234511.1 | DUF554 domain-containing protein | - |
| SF2A_RS16590 (3050047) | 3050047..3051309 | + | 1263 | WP_001218804.1 | hypothetical protein ; Integrase | Integrase |
| SF2A_RS16595 (3051762) | 3051762..3055277 | + | 3516 | WP_000344102.1 | AAA domain-containing protein | - |
| SF2A_RS28145 (3055419) | 3055419..3055589 | + | 171 | Protein_3034 | IS3 family transposase | - |
| SF2A_RS28150 (3055635) | 3055635..3055982 | + | 348 | Protein_3035 | transposase | - |
| SF2A_RS28155 (3056021) | 3056021..3056398 | - | 378 | Protein_3036 | transposase | - |
| SF2A_RS16610 (3056383) | 3056383..3057387 | + | 1005 | Protein_3037 | conjugal transfer protein TraF | - |
| SF2A_RS16615 (3057748) | 3057748..3061605 | + | 3858 | WP_001034110.1 | hypothetical protein | VF |
| SF2A_RS16620 (3061664) | 3061664..3062233 | + | 570 | WP_228355546.1 | hypothetical protein | - |
| SF2A_RS16625 (3062636) | 3062636..3063036 | - | 401 | Protein_3040 | IS66 family transposase ISEc8 | Transposase |
| SF2A_RS16630 (3063040) | 3063040..3063615 | + | 576 | Protein_3041 | ISL3 family transposase ISEc38 | Transposase |
| SF2A_RS16635 (3063666) | 3063666..3064616 | + | 951 | Protein_3042 | IS66 family transposase ISCro1 | Transposase |
| SF2A_RS16640 (3064655) | 3064655..3064897 | + | 243 | Protein_3043 | IS256 family transposase IS1414 | Transposase |
| SF2A_RS16645 (3065048) | 3065048..3069166 | - | 4119 | WP_001045650.1 | hypothetical protein | VF |
| SF2A_RS16655 (3069279) | 3069279..3070507 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| SF2A_RS16660 (3070667) | 3070667..3071146 | - | 480 | Protein_3046 | IS3 family transposase IS629 | Transposase |
| SF2A_RS16665 (3071230) | 3071230..3072738 | - | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| SF2A_RS28165 (3073411) | 3073411..3074150 | - | 740 | Protein_3048 | IS3 family transposase IS629 | Transposase |
| SF2A_RS16690 (3074433) | 3074433..3074858 | - | 426 | WP_001013320.1 | putative zinc ribbon protein | - |
| SF2A_RS16695 (3074855) | 3074855..3075238 | - | 384 | WP_000271035.1 | putative zinc ribbon protein | - |
| SF2A_RS28175 (3075442) | 3075442..3076598 | + | 1157 | WP_094108358.1 | IS3 family transposase IS600 | Transposase |
| SF2A_RS16710 (3076878) | 3076878..3077477 | - | 600 | WP_001195464.1 | inovirus-type Gp2 protein | - |
| SF2A_RS16720 (3078750) | 3078750..3079541 | + | 792 | WP_011069510.1 | hypothetical protein | - |
| SF2A_RS16725 (3079927) | 3079927..3080133 | + | 207 | WP_001095918.1 | AlpA family transcriptional regulator | - |
| SF2A_RS16730 (3080219) | 3080219..3080791 | + | 573 | WP_005093820.1 | hypothetical protein | - |
| SF2A_RS16735 (3080793) | 3080793..3081077 | - | 285 | WP_000261147.1 | hypothetical protein | - |
| SF2A_RS28190 (3081048) | 3081048..3081191 | + | 144 | Protein_3057 | IS1 family transposase | - |
| SF2A_RS16740 (3082360) | 3082360..3083379 | + | 1020 | WP_005051842.1 | hypothetical protein | - |
| SF2A_RS16745 (3083489) | 3083489..3084361 | + | 873 | WP_001069724.1 | GTPase family protein | - |
| SF2A_RS16750 (3084695) | 3084695..3087817 | + | 3123 | WP_000820367.1 | autotransporter adhesin Ag43 | - |
| SF2A_RS16755 (3087938) | 3087938..3090454 | + | 2517 | WP_005093816.1 | hypothetical protein | - |
| SF2A_RS16760 (3090530) | 3090530..3090985 | + | 456 | WP_005051844.1 | IrmA family protein | - |
| SF2A_RS30975 (3091128) | 3091128..3091217 | + | 90 | WP_112031555.1 | DUF905 family protein | - |
| SF2A_RS16770 (3091396) | 3091396..3092214 | + | 819 | WP_001177758.1 | DUF932 domain-containing protein | - |
| SF2A_RS16780 (3092556) | 3092556..3093029 | + | 474 | WP_000855059.1 | antirestriction protein | - |
| SF2A_RS16785 (3093045) | 3093045..3093521 | + | 477 | WP_001387238.1 | RadC family protein | - |
| SF2A_RS16790 (3093608) | 3093608..3093829 | + | 222 | WP_000692350.1 | DUF987 domain-containing protein | - |
| SF2A_RS16795 (3093909) | 3093909..3094286 | + | 378 | WP_001285622.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| SF2A_RS16800 (3094333) | 3094333..3094710 | + | 378 | WP_001094430.1 | TA system toxin CbtA family protein | Toxin Detail |
| SF2A_RS16805 (3094707) | 3094707..3095195 | + | 489 | WP_000761715.1 | DUF5983 family protein | - |
| SF2A_RS16810 (3095215) | 3095215..3095412 | + | 198 | WP_000772029.1 | DUF957 domain-containing protein | - |
| SF2A_RS16815 (3095497) | 3095497..3096339 | + | 843 | WP_001290187.1 | DUF4942 domain-containing protein | - |
| SF2A_RS16820 (3097116) | 3097116..3097361 | + | 246 | WP_000875412.1 | hypothetical protein | - |
| SF2A_RS16830 (3097764) | 3097764..3098926 | + | 1163 | WP_094081514.1 | IS3 family transposase ISEc17 | Transposase |
| SF2A_RS16835 (3099030) | 3099030..3099497 | - | 468 | WP_011069513.1 | prepilin peptidase | - |
| SF2A_RS16840 (3099563) | 3099563..3099802 | - | 240 | WP_001091314.1 | Flp family type IVb pilin | - |
| SF2A_RS16845 (3099937) | 3099937..3100542 | - | 606 | WP_001278645.1 | hypothetical protein | VF |
| SF2A_RS28205 (3100657) | 3100657..3101355 | - | 699 | Protein_3078 | IS1 family transposase | - |
| SF2A_RS16855 (3102812) | 3102812..3104407 | - | 1596 | WP_000259314.1 | lactate permease LctP family transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|