MGE detailed information
MGE type: Prophage MGE length: 80794 bp
Accession: NZ_CP007037 Location: 1867243..1948036 Organism: Shigella flexneri G1663 Replicon: chromosome
Accession: NZ_CP007037 Location: 1867243..1948036 Organism: Shigella flexneri G1663 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SF2A_RS10235 () | 1863188..1863552 | - | 365 | Protein_1871 | transposase | - |
| SF2A_RS10240 () | 1863680..1864711 | + | 1032 | WP_000559908.1 | low conductance mechanosensitive channel YnaI | - |
| SF2A_RS10245 () | 1864762..1866375 | - | 1614 | WP_000683016.1 | murein tripeptide ABC transporter substrate-binding protein MppA | - |
| SF2A_RS10255 () | 1866712..1867179 | - | 468 | Protein_1874 | DNA-binding transcriptional regulator PgrR | - |
| SF2A_RS10260 () | 1867243..1867553 | + | 311 | Protein_1875 | IS3 family transposase ISSfl10 | Transposase |
| SF2A_RS27470 () | 1867596..1868805 | - | 1210 | Protein_1876 | IS3 family transposase IS629 | Transposase |
| SF2A_RS10280 () | 1868860..1869708 | + | 849 | Protein_1877 | IS3 family transposase ISSd1 | Transposase |
| SF2A_RS27475 () | 1869825..1870106 | + | 282 | WP_005127484.1 | excisionase | - |
| SF2A_RS30840 () | 1870072..1871149 | + | 1078 | Protein_1879 | phage integrase Arm DNA-binding domain-containing protein | - |
| - | 1871290..1871524 | + | 235 | - | - | Antitoxin Detail |
| - | 1871291..1871394 | - | 104 | - | - | Toxin Detail |
| SF2A_RS10295 () | 1871552..1871893 | - | 342 | WP_000976476.1 | YebY family protein | - |
| SF2A_RS27490 () | 1871906..1872778 | - | 873 | Protein_1881 | copper homeostasis membrane protein CopD | - |
| SF2A_RS10310 () | 1872782..1873156 | - | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| SF2A_RS10315 () | 1873295..1873525 | + | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| SF2A_RS10320 () | 1873627..1874283 | + | 657 | Protein_1884 | carbon-nitrogen hydrolase family protein | - |
| SF2A_RS10325 () | 1874307..1874969 | + | 663 | WP_000944268.1 | exodeoxyribonuclease X | - |
| SF2A_RS10330 () | 1874966..1877026 | - | 2061 | WP_000936980.1 | oligopeptidase B | - |
| SF2A_RS10335 () | 1877236..1877895 | - | 660 | WP_000024751.1 | tellurite resistance TerB family protein | - |
| SF2A_RS10345 () | 1878222..1878578 | - | 357 | WP_005047608.1 | protein YebF | - |
| SF2A_RS29670 () | 1878645..1878935 | - | 291 | Protein_1889 | DNA damage-inducible protein YebG | - |
| SF2A_RS10355 () | 1879069..1880247 | + | 1179 | WP_000173488.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| SF2A_RS10360 () | 1880303..1880944 | - | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| SF2A_RS10365 () | 1880981..1882792 | - | 1812 | WP_001069479.1 | phosphogluconate dehydratase | - |
| SF2A_RS10370 () | 1883027..1884502 | - | 1476 | WP_000301736.1 | glucose-6-phosphate dehydrogenase | - |
| SF2A_RS10380 () | 1884840..1885709 | + | 870 | WP_001056694.1 | DNA-binding transcriptional regulator HexR | - |
| SF2A_RS10385 () | 1885837..1887279 | + | 1443 | WP_000044417.1 | pyruvate kinase | - |
| SF2A_RS10390 () | 1887410..1888381 | - | 972 | WP_000448385.1 | hypothetical protein | VF |
| SF2A_RS10395 () | 1888501..1889823 | - | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| SF2A_RS10400 () | 1889839..1890771 | - | 933 | WP_001342995.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| SF2A_RS10405 () | 1890850..1891605 | + | 756 | WP_000202992.1 | hypothetical protein | VF |
| SF2A_RS10410 () | 1891602..1892387 | + | 786 | WP_000571470.1 | hypothetical protein | VF |
| SF2A_RS10415 () | 1892534..1893544 | - | 1011 | WP_000568525.1 | Holliday junction branch migration DNA helicase RuvB | - |
| SF2A_RS10420 () | 1893553..1894164 | - | 612 | WP_000580324.1 | Holliday junction branch migration protein RuvA | - |
| SF2A_RS27510 () | 1894303..1894368 | - | 66 | WP_001386853.1 | stress response small protein YobI | - |
| SF2A_RS10425 () | 1894438..1895040 | + | 603 | WP_001024930.1 | YebB family permuted papain-like enzyme | - |
| SF2A_RS10430 () | 1895042..1895563 | - | 522 | WP_000974712.1 | crossover junction endodeoxyribonuclease RuvC | - |
| SF2A_RS10435 () | 1895598..1896338 | - | 741 | WP_000907248.1 | hypothetical protein | VF |
| SF2A_RS10440 () | 1896367..1896819 | - | 453 | WP_001300367.1 | dihydroneopterin triphosphate diphosphatase | - |
| SF2A_RS10445 () | 1896937..1898709 | - | 1773 | WP_001258670.1 | aspartate--tRNA ligase | - |
| SF2A_RS10450 () | 1899019..1899237 | + | 219 | Protein_1909 | isochorismatase family protein | - |
| SF2A_RS10455 () | 1899465..1900661 | + | 1197 | WP_005047585.1 | IS110 family transposase ISSfl4 | Transposase |
| SF2A_RS10460 () | 1900688..1901035 | + | 348 | Protein_1911 | hydrolase | - |
| SF2A_RS30845 () | 1901032..1901127 | + | 96 | Protein_1912 | hypothetical protein | - |
| SF2A_RS10470 () | 1901390..1901638 | + | 249 | WP_001210039.1 | DinI-like family protein | - |
| SF2A_RS10480 () | 1902238..1903989 | + | 1752 | WP_005031414.1 | hypothetical protein | VF |
| SF2A_RS30850 () | 1904059..1904163 | - | 105 | Protein_1915 | tail fiber assembly protein | - |
| SF2A_RS10490 () | 1904169..1904792 | - | 624 | WP_000930145.1 | DUF4376 domain-containing protein | - |
| SF2A_RS10495 () | 1904743..1906154 | - | 1412 | Protein_1917 | prophage tail fiber N-terminal domain-containing protein | - |
| SF2A_RS10500 () | 1906218..1906817 | - | 600 | WP_001230368.1 | hypothetical protein | VF |
| SF2A_RS10505 () | 1906885..1910364 | - | 3480 | WP_000515521.1 | host specificity protein J | - |
| SF2A_RS10510 () | 1910425..1911000 | - | 576 | WP_005105520.1 | tail assembly protein | - |
| SF2A_RS10515 () | 1910964..1911707 | - | 744 | WP_000194740.1 | C40 family peptidase | - |
| SF2A_RS10520 () | 1911712..1912410 | - | 699 | WP_001152490.1 | phage minor tail protein L | - |
| SF2A_RS10525 () | 1912410..1912739 | - | 330 | WP_000447264.1 | phage tail protein | - |
| SF2A_RS10530 () | 1912739..1915780 | - | 3042 | WP_000371983.1 | phage tail tape measure protein | - |
| SF2A_RS10535 () | 1915752..1916081 | - | 330 | WP_001161004.1 | phage tail assembly protein T | - |
| SF2A_RS10540 () | 1916090..1916476 | - | 387 | WP_000478927.1 | phage minor tail protein G | - |
| SF2A_RS10545 () | 1916535..1917275 | - | 741 | WP_000211126.1 | phage tail tube protein | - |
| SF2A_RS10550 () | 1917286..1917687 | - | 402 | WP_001079406.1 | phage minor tail U family protein | - |
| SF2A_RS10555 () | 1917684..1918274 | - | 591 | WP_000677116.1 | phage tail protein | - |
| SF2A_RS10560 () | 1918261..1918632 | - | 372 | WP_000753026.1 | head-tail joining protein | - |
| SF2A_RS10565 () | 1918644..1919045 | - | 402 | WP_001074423.1 | DNA-packaging protein FI | - |
| SF2A_RS10570 () | 1919309..1920505 | + | 1197 | WP_005047585.1 | IS110 family transposase ISSfl4 | Transposase |
| SF2A_RS30855 () | 1920681..1921028 | - | 348 | WP_252739102.1 | hypothetical protein | - |
| SF2A_RS10595 () | 1921692..1922381 | - | 690 | WP_001064885.1 | hypothetical protein | VF |
| SF2A_RS10600 () | 1922378..1922737 | - | 360 | WP_001215517.1 | RusA family crossover junction endodeoxyribonuclease | - |
| SF2A_RS30340 () | 1922737..1922877 | - | 141 | Protein_1936 | hypothetical protein | - |
| SF2A_RS27525 () | 1922941..1924097 | + | 1157 | Protein_1937 | IS3 family transposase ISSd1 | Transposase |
| SF2A_RS30860 () | 1924410..1924598 | + | 189 | WP_001028876.1 | hypothetical protein | - |
| SF2A_RS10625 () | 1924595..1925422 | + | 828 | WP_000755956.1 | SPFH domain-containing protein | - |
| SF2A_RS10630 () | 1925466..1926215 | + | 750 | WP_001099210.1 | ORF6N domain-containing protein | - |
| SF2A_RS10635 () | 1926212..1926781 | + | 570 | WP_000586688.1 | hypothetical protein | - |
| SF2A_RS10640 () | 1926905..1927147 | + | 243 | WP_000457719.1 | DUF4222 domain-containing protein | - |
| SF2A_RS10645 () | 1927151..1927297 | + | 147 | WP_001030133.1 | hypothetical protein | - |
| SF2A_RS10650 () | 1927306..1927470 | + | 165 | Protein_1944 | excisionase family protein | - |
| SF2A_RS10665 () | 1928879..1929226 | + | 348 | Protein_1946 | DUF72 domain-containing protein | - |
| SF2A_RS10670 () | 1929279..1929674 | + | 396 | WP_005048647.1 | MAPEG family protein | - |
| SF2A_RS10675 () | 1929715..1930458 | + | 744 | WP_000019588.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| SF2A_RS10680 () | 1930455..1931426 | + | 972 | WP_000564755.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| SF2A_RS10685 () | 1931591..1934020 | - | 2430 | WP_001229400.1 | trimethylamine N-oxide reductase TorZ | - |
| SF2A_RS10690 () | 1934045..1935145 | - | 1101 | WP_001214308.1 | NapC/NirT family cytochrome c | - |
| SF2A_RS10695 () | 1935533..1936279 | - | 747 | WP_001185741.1 | copper homeostasis protein CutC | - |
| SF2A_RS10700 () | 1936293..1936859 | - | 567 | WP_005048653.1 | VOC family protein | - |
| SF2A_RS10705 () | 1937075..1938808 | + | 1734 | WP_001025297.1 | arginine--tRNA ligase | - |
| SF2A_RS30865 () | 1938850..1938894 | - | 45 | WP_212734366.1 | hypothetical protein | - |
| SF2A_RS10710 () | 1938985..1939473 | + | 489 | WP_005063152.1 | lysozyme inhibitor LprI family protein | - |
| SF2A_RS29685 () | 1939591..1939659 | - | 69 | Protein_1957 | flagellar protein FlhE | - |
| SF2A_RS27545 () | 1939693..1940888 | - | 1196 | Protein_1958 | IS3 family transposase | - |
| SF2A_RS10730 () | 1940940..1941278 | - | 339 | WP_001259572.1 | Flagellar protein FlhE | VF |
| SF2A_RS10735 () | 1941278..1943295 | - | 2018 | Protein_1960 | Flagellar biosynthesis protein FlhA | VF |
| SF2A_RS10740 () | 1943348..1944495 | - | 1148 | Protein_1961 | Flagellar biosynthetic protein FlhB | VF |
| SF2A_RS27550 () | 1944731..1945189 | + | 459 | WP_000455174.1 | HD domain-containing protein | - |
| SF2A_RS10755 () | 1946433..1946828 | + | 396 | WP_001103659.1 | hypothetical protein | - |
| SF2A_RS27560 () | 1946880..1948036 | + | 1157 | Protein_1965 | IS3 family transposase ISSd1 | Transposase |
| SF2A_RS10770 () | 1948048..1948452 | + | 405 | WP_011069416.1 | hypothetical protein | - |
| SF2A_RS10775 () | 1948540..1949184 | - | 645 | WP_000983598.1 | protein phosphatase CheZ | - |
| SF2A_RS10780 () | 1949195..1949584 | - | 390 | WP_000763867.1 | chemotaxis response regulator CheY | - |
| SF2A_RS10785 () | 1949599..1950648 | - | 1050 | WP_000036372.1 | protein-glutamate methylesterase/protein glutamine deamidase | - |
| SF2A_RS10790 () | 1950651..1951511 | - | 861 | WP_000204331.1 | protein-glutamate O-methyltransferase CheR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|