MGE detailed information
MGE type: Genomic_island MGE length: 28803 bp
Accession: NZ_CP007029 Location: 957506..986308 Organism: Thioalkalivibrio paradoxus ARh Replicon: chromosome
Accession: NZ_CP007029 Location: 957506..986308 Organism: Thioalkalivibrio paradoxus ARh Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| THITH_RS04390 () | 952819..955731 | + | 2913 | WP_006749062.1 | ribonucleoside-diphosphate reductase subunit alpha | - |
| THITH_RS04395 () | 956031..957272 | + | 1242 | WP_006749061.1 | ribonucleotide-diphosphate reductase subunit beta | - |
| THITH_RS17560 () | 957287..957534 | + | 248 | Protein_878 | DUF4160 domain-containing protein | - |
| THITH_RS04400 () | 957506..957769 | + | 264 | WP_006749060.1 | DUF2442 domain-containing protein | - |
| THITH_RS04405 () | 958282..958677 | - | 396 | WP_006749059.1 | type II toxin-antitoxin system VapC family toxin | - |
| THITH_RS04410 () | 958674..958919 | - | 246 | WP_006749058.1 | hypothetical protein | - |
| THITH_RS04420 () | 959126..959488 | + | 363 | WP_006749057.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| THITH_RS04425 () | 959512..959826 | + | 315 | WP_006749056.1 | hypothetical protein | - |
| THITH_RS04435 () | 960265..960726 | + | 462 | WP_006749055.1 | hypothetical protein | - |
| THITH_RS17565 () | 960889..961233 | - | 345 | WP_006749054.1 | hypothetical protein | - |
| THITH_RS04440 () | 961391..961951 | + | 561 | WP_006749053.1 | hypothetical protein | - |
| THITH_RS04445 () | 962069..962743 | - | 675 | Protein_887 | group II intron reverse transcriptase/maturase | - |
| THITH_RS04450 () | 962763..963395 | + | 633 | WP_051418618.1 | hypothetical protein | - |
| THITH_RS17570 () | 963523..964668 | + | 1146 | WP_006749050.1 | HNH endonuclease | - |
| THITH_RS17575 () | 964732..965097 | + | 366 | WP_084222615.1 | VOC family protein | - |
| THITH_RS04455 () | 965308..966984 | - | 1677 | WP_006746001.1 | IS66 family transposase | - |
| THITH_RS04460 () | 967033..967386 | - | 354 | WP_006746000.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| THITH_RS04465 () | 967383..967616 | - | 234 | WP_006749214.1 | hypothetical protein | - |
| THITH_RS17580 () | 967791..968033 | + | 243 | WP_084222616.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| THITH_RS17585 () | 968044..968331 | + | 288 | WP_006749049.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| THITH_RS04470 () | 968634..969128 | - | 495 | WP_198019469.1 | transposase | - |
| THITH_RS17590 () | 969943..970146 | + | 204 | WP_006749046.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| THITH_RS17595 () | 970143..970370 | + | 228 | WP_083499445.1 | type II toxin-antitoxin system HicA family toxin | - |
| THITH_RS04480 () | 970770..971453 | - | 684 | WP_006749045.1 | hypothetical protein | - |
| THITH_RS04485 () | 971461..972387 | - | 927 | WP_006749044.1 | aldo/keto reductase | - |
| THITH_RS04490 () | 972387..972815 | - | 429 | WP_006749043.1 | hypothetical protein | - |
| THITH_RS04495 () | 973009..973245 | + | 237 | WP_006749042.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | - |
| THITH_RS04500 () | 973242..973616 | + | 375 | WP_006749041.1 | type II toxin-antitoxin system VapC family toxin | - |
| THITH_RS04505 () | 973832..974080 | + | 249 | WP_006749040.1 | ribbon-helix-helix domain-containing protein | - |
| THITH_RS04510 () | 974080..974478 | + | 399 | WP_006749039.1 | type II toxin-antitoxin system VapC family toxin | - |
| THITH_RS04515 () | 974642..975103 | + | 462 | WP_006749038.1 | hypothetical protein | - |
| THITH_RS04520 () | 975115..975450 | - | 336 | WP_006749037.1 | hypothetical protein | - |
| THITH_RS04525 () | 975465..976034 | + | 570 | Protein_908 | restriction endonuclease subunit R | - |
| THITH_RS04530 () | 976241..976519 | + | 279 | WP_006749035.1 | BrnT family toxin | - |
| THITH_RS17600 () | 976503..976784 | + | 282 | WP_006749034.1 | hypothetical protein | - |
| THITH_RS04540 () | 976799..977713 | - | 915 | WP_006749033.1 | NAD(P)H-binding protein | - |
| THITH_RS04545 () | 977857..978858 | + | 1002 | WP_006749032.1 | AraC family transcriptional regulator | - |
| THITH_RS04550 () | 979080..979817 | + | 738 | WP_006749031.1 | hypothetical protein | - |
| THITH_RS04555 () | 980038..980484 | + | 447 | WP_006749030.1 | HIT domain-containing protein | - |
| THITH_RS04560 () | 980508..981455 | + | 948 | WP_006749029.1 | hypothetical protein | - |
| THITH_RS04565 () | 981717..982460 | - | 744 | WP_041483596.1 | 3-oxoacyl-ACP reductase FabG | - |
| THITH_RS04570 () | 982853..983179 | - | 327 | WP_006749027.1 | hypothetical protein | - |
| THITH_RS04575 () | 983469..983900 | - | 432 | WP_006749026.1 | hypothetical protein | - |
| THITH_RS18680 () | 984160..984278 | + | 119 | Protein_919 | Uma2 family endonuclease | - |
| THITH_RS18685 () | 984276..984455 | + | 180 | WP_198019521.1 | hypothetical protein | - |
| THITH_RS18690 () | 984406..984609 | + | 204 | WP_198019470.1 | dihydrofolate reductase family protein | - |
| THITH_RS17605 () | 984760..985194 | + | 435 | WP_198019491.1 | OsmC family protein | - |
| THITH_RS04580 () | 985257..985529 | + | 273 | WP_006749024.1 | hypothetical protein | - |
| THITH_RS04585 () | 985526..986308 | + | 783 | WP_006749023.1 | methyltransferase domain-containing protein | - |
| THITH_RS04590 () | 986573..987544 | + | 972 | WP_006749022.1 | hypothetical protein | - |
| THITH_RS04595 () | 987624..988958 | - | 1335 | WP_006749021.1 | HAMP domain-containing protein | - |
| THITH_RS04600 () | 988955..989686 | - | 732 | WP_006749020.1 | response regulator | - |
| THITH_RS18695 () | 989911..990066 | + | 156 | WP_006749019.1 | hypothetical protein | - |
| THITH_RS04605 () | 990311..990763 | - | 453 | WP_006749018.1 | PAS domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|