MGE detailed information
MGE type: Genomic_island MGE length: 13617 bp
Accession: NZ_CP007029 Location: 461317..474933 Organism: Thioalkalivibrio paradoxus ARh Replicon: chromosome
Accession: NZ_CP007029 Location: 461317..474933 Organism: Thioalkalivibrio paradoxus ARh Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| THITH_RS02080 () | 456755..457966 | + | 1212 | WP_006746166.1 | PQQ-dependent sugar dehydrogenase | - |
| THITH_RS02085 () | 458134..458514 | + | 381 | WP_006746165.1 | nucleotidyltransferase domain-containing protein | - |
| THITH_RS02090 () | 458504..458938 | + | 435 | WP_006746164.1 | DUF86 domain-containing protein | - |
| THITH_RS02095 () | 459036..459422 | - | 387 | WP_006746163.1 | type II toxin-antitoxin system VapC family toxin | - |
| THITH_RS02100 () | 459422..459652 | - | 231 | WP_006746162.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| THITH_RS02105 () | 460022..460285 | + | 264 | WP_006746161.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| THITH_RS02110 () | 460694..461074 | - | 381 | WP_006746160.1 | helix-turn-helix transcriptional regulator | - |
| THITH_RS02115 () | 461071..461286 | - | 216 | WP_006746159.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| THITH_RS02120 () | 461317..461517 | - | 201 | WP_006746158.1 | DUF2283 domain-containing protein | - |
| THITH_RS02125 () | 461514..461774 | - | 261 | WP_084222598.1 | DUF4258 domain-containing protein | - |
| THITH_RS02130 () | 461780..462226 | - | 447 | Protein_430 | hypothetical protein | - |
| THITH_RS02135 () | 462236..462667 | - | 432 | WP_006746155.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| THITH_RS02140 () | 462664..462903 | - | 240 | WP_006746154.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| THITH_RS02145 () | 463107..463500 | + | 394 | Protein_433 | nucleotidyltransferase domain-containing protein | - |
| THITH_RS02150 () | 463782..464042 | + | 261 | WP_006746152.1 | prevent-host-death protein | - |
| THITH_RS02155 () | 464048..464326 | + | 279 | WP_006746151.1 | type II toxin-antitoxin system YafQ family toxin | - |
| THITH_RS17390 () | 464323..464523 | - | 201 | WP_198019487.1 | type II toxin-antitoxin system HicA family toxin | - |
| THITH_RS02160 () | 464569..464799 | - | 231 | WP_006746150.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| THITH_RS17405 () | 465285..465536 | + | 252 | WP_198019458.1 | BrnT family toxin | - |
| THITH_RS02165 () | 465553..465738 | + | 186 | WP_198019488.1 | hypothetical protein | - |
| THITH_RS02170 () | 466103..467278 | - | 1176 | WP_006746148.1 | hypothetical protein | - |
| THITH_RS02175 () | 467518..467940 | - | 423 | WP_006746147.1 | type II toxin-antitoxin system VapC family toxin | - |
| THITH_RS02180 () | 467940..468182 | - | 243 | WP_006746146.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | - |
| THITH_RS02185 () | 468676..470559 | - | 1884 | WP_006746145.1 | hypothetical protein | - |
| THITH_RS02190 () | 470584..471879 | - | 1296 | WP_006746144.1 | pilus assembly PilX N-terminal domain-containing protein | - |
| THITH_RS02195 () | 471906..472832 | - | 927 | WP_084222599.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| THITH_RS02200 () | 472839..473372 | - | 534 | WP_198019459.1 | GspH/FimT family pseudopilin | - |
| THITH_RS02205 () | 473651..474070 | + | 420 | WP_198019489.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| THITH_RS02210 () | 474223..474933 | - | 711 | WP_006746140.1 | LytTR family DNA-binding domain-containing protein | - |
| THITH_RS02215 () | 474902..475975 | - | 1074 | WP_006746139.1 | histidine kinase | - |
| THITH_RS02220 () | 476114..476326 | + | 213 | WP_006746138.1 | antitoxin MazE family protein | - |
| THITH_RS02225 () | 476326..476655 | + | 330 | WP_025367201.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| THITH_RS02230 () | 476770..477654 | + | 885 | WP_006746136.1 | formylglycine-generating enzyme family protein | - |
| THITH_RS02235 () | 477716..478228 | - | 513 | WP_006746135.1 | protein disulfide oxidoreductase | - |
| THITH_RS02240 () | 478694..479755 | + | 1062 | WP_006746134.1 | quinolinate synthase NadA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|