MGE detailed information
MGE type: IScluster/Tn MGE length: 6364 bp
Accession: NZ_CP007027 Location: 3794482..3800845 Organism: Mycobacterium tuberculosis H37RvSiena Replicon: chromosome
Accession: NZ_CP007027 Location: 3794482..3800845 Organism: Mycobacterium tuberculosis H37RvSiena Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Y980_RS17850 () | 3789538..3790191 | + | 654 | WP_003417903.1 | HAD family phosphatase | - |
| Y980_RS17855 () | 3790230..3791735 | - | 1506 | WP_003417905.1 | type B diterpene cyclase | - |
| Y980_RS17860 () | 3791740..3792630 | - | 891 | WP_003417908.1 | diterpene synthase | - |
| Y980_RS17865 () | 3792639..3794439 | - | 1801 | Protein_3497 | 1-deoxy-D-xylulose-5-phosphate synthase | - |
| Y980_RS17885 () | 3795830..3796819 | - | 990 | WP_003417912.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| Y980_RS17890 () | 3796819..3797871 | - | 1053 | WP_009935184.1 | polyprenyl synthetase family protein | - |
| Y980_RS17895 () | 3798625..3799017 | - | 393 | WP_003417916.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| Y980_RS17900 () | 3799017..3799292 | - | 276 | WP_003912214.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| Y980_RS21865 () | 3799504..3800845 | + | 1342 | Protein_3503 | ISNCY family transposase ISRjo3 | Transposase |
| Y980_RS17915 () | 3801035..3803230 | + | 2196 | WP_010886168.1 | PE family protein | - |
| Y980_RS17920 () | 3803301..3804173 | - | 873 | WP_003417929.1 | 3-hydroxyacyl-thioester dehydratase HtdY | - |
| Y980_RS17925 () | 3804247..3804957 | + | 711 | WP_003417932.1 | phosphoglycerate mutase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | IScluster/Tn | TA131 | NC_000962 | 3795100..3801463 | 0 |