MGE detailed information
MGE type: Genomic_island MGE length: 26035 bp
Accession: NZ_CP006954 Location: 543355..569389 Organism: Bibersteinia trehalosi USDA-ARS-USMARC-188 Replicon: chromosome
Accession: NZ_CP006954 Location: 543355..569389 Organism: Bibersteinia trehalosi USDA-ARS-USMARC-188 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F542_RS02620 () | 539426..540283 | - | 858 | WP_025266832.1 | glycosyltransferase | - |
| F542_RS02625 () | 540295..542229 | - | 1935 | WP_025266833.1 | DNA topoisomerase IV subunit B | - |
| F542_RS02630 () | 542339..542761 | - | 423 | WP_025266834.1 | hypothetical protein | - |
| F542_RS02635 () | 542827..543081 | - | 255 | WP_025266835.1 | hypothetical protein | - |
| F542_RS02640 () | 543084..543332 | - | 249 | WP_025266836.1 | hypothetical protein | - |
| F542_RS02645 () | 543355..543981 | - | 627 | WP_025266837.1 | DUF805 domain-containing protein | - |
| F542_RS02650 () | 544117..544449 | + | 333 | WP_015433079.1 | helix-turn-helix transcriptional regulator | - |
| F542_RS02655 () | 544612..546552 | + | 1941 | WP_025266838.1 | ABC transporter ATP-binding protein | - |
| F542_RS02660 () | 546552..547172 | + | 621 | WP_025266839.1 | thiamine diphosphokinase | - |
| F542_RS02665 () | 547228..547992 | + | 765 | WP_025266840.1 | tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA | - |
| F542_RS02670 () | 548112..548666 | - | 555 | WP_025266841.1 | TetR/AcrR family transcriptional regulator | - |
| F542_RS02675 () | 548814..549836 | + | 1023 | WP_025266842.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| F542_RS02680 () | 549836..552580 | + | 2745 | WP_015433073.1 | Ribosome-associated ATPase | VF |
| F542_RS02685 () | 552582..553706 | + | 1125 | WP_025266843.1 | ABC transporter permease | - |
| F542_RS02690 () | 553710..555104 | + | 1395 | WP_025266844.1 | TolC family protein | - |
| F542_RS10950 () | 555129..555230 | + | 102 | Protein_531 | tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA | - |
| F542_RS02695 () | 555442..556428 | + | 987 | WP_025266845.1 | amidohydrolase family protein | - |
| F542_RS02700 () | 556476..557030 | - | 555 | WP_025266846.1 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | - |
| F542_RS02705 () | 557087..557929 | + | 843 | WP_015433068.1 | 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ | - |
| F542_RS02710 () | 557978..558619 | + | 642 | WP_025266847.1 | orotate phosphoribosyltransferase | - |
| F542_RS02715 () | 558670..559251 | - | 582 | WP_015433066.1 | rhomboid family intramembrane serine protease | - |
| F542_RS02720 () | 559244..559873 | - | 630 | WP_015433065.1 | DsbA family oxidoreductase | - |
| F542_RS02725 () | 559877..560329 | - | 453 | WP_025266848.1 | hypothetical protein | - |
| F542_RS02730 () | 560563..561822 | - | 1260 | WP_038445701.1 | MFS transporter | - |
| F542_RS02735 () | 562031..562435 | + | 405 | Protein_540 | Hemin import ATP-binding protein HmuV | VF |
| F542_RS10875 () | 562573..562758 | + | 186 | Protein_541 | ATP-binding protein | - |
| F542_RS02740 () | 562874..563128 | + | 255 | WP_015433060.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| F542_RS02745 () | 563122..564408 | + | 1287 | WP_015433059.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| F542_RS02750 () | 564480..564908 | - | 429 | WP_015433058.1 | helix-turn-helix domain-containing protein | - |
| F542_RS02755 () | 565057..566058 | + | 1002 | WP_015433057.1 | TerC/Alx family metal homeostasis membrane protein | - |
| F542_RS02760 () | 566059..566838 | + | 780 | WP_015433056.1 | hypothetical protein | - |
| F542_RS02765 () | 566878..567453 | + | 576 | WP_015433055.1 | TerD family protein | - |
| F542_RS02770 () | 567501..568175 | + | 675 | WP_038445703.1 | stress protein | - |
| F542_RS02775 () | 568241..569389 | - | 1149 | WP_015433053.1 | TIR domain-containing protein | - |
| F542_RS02780 () | 569472..573185 | - | 3714 | WP_015433052.1 | methionine synthase | - |
| F542_RS02785 () | 573343..574143 | + | 801 | WP_025266851.1 | D-hexose-6-phosphate mutarotase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|