MGE detailed information
MGE type: Genomic_island MGE length: 11556 bp
Accession: NZ_CP006943 Location: 1898154..1909709 Organism: Mannheimia varigena USDA-ARS-USMARC-1296 Replicon: chromosome
Accession: NZ_CP006943 Location: 1898154..1909709 Organism: Mannheimia varigena USDA-ARS-USMARC-1296 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| X808_RS08960 () | 1894733..1895410 | - | 678 | WP_025217992.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| X808_RS08965 () | 1895480..1896019 | + | 540 | WP_025217993.1 | HAD-IIIA family hydrolase | - |
| X808_RS08970 () | 1896041..1896349 | - | 309 | WP_038643460.1 | DUF3144 domain-containing protein | - |
| X808_RS08975 () | 1896431..1897393 | - | 963 | WP_025217995.1 | RNA polymerase sigma factor RpoH | - |
| X808_RS08980 () | 1898154..1899395 | + | 1242 | WP_025217996.1 | tyrosine-type recombinase/integrase | - |
| X808_RS08985 () | 1899702..1900034 | + | 333 | WP_025217997.1 | hypothetical protein | Toxin Detail |
| X808_RS08990 () | 1900043..1900351 | + | 309 | WP_025217998.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| X808_RS08995 () | 1900650..1901597 | + | 948 | WP_025217999.1 | hypothetical protein | - |
| X808_RS09000 () | 1901683..1902522 | + | 840 | WP_025218000.1 | damage-inducible protein DnaD | - |
| X808_RS09005 () | 1902765..1902974 | + | 210 | WP_025218001.1 | AlpA family phage regulatory protein | - |
| X808_RS09010 () | 1903022..1903273 | + | 252 | WP_051410694.1 | hypothetical protein | - |
| X808_RS09015 () | 1903279..1903611 | + | 333 | WP_025218003.1 | hypothetical protein | - |
| X808_RS09020 () | 1903722..1904288 | + | 567 | WP_025218004.1 | ash family protein | - |
| X808_RS09025 () | 1904281..1904541 | + | 261 | WP_025218005.1 | hypothetical protein | - |
| X808_RS09030 () | 1904538..1904741 | + | 204 | WP_025218006.1 | hypothetical protein | - |
| X808_RS09035 () | 1904734..1905081 | + | 348 | WP_025218007.1 | hypothetical protein | - |
| X808_RS09040 () | 1905074..1905424 | + | 351 | WP_025218008.1 | hypothetical protein | - |
| X808_RS10945 () | 1905417..1907162 | + | 1746 | WP_025218009.1 | hypothetical protein | - |
| X808_RS09050 () | 1907901..1908992 | + | 1092 | WP_025218010.1 | ATP-binding protein | - |
| X808_RS09055 () | 1909005..1909709 | + | 705 | WP_025218011.1 | DUF4435 domain-containing protein | - |
| X808_RS09060 () | 1909797..1910618 | - | 822 | WP_025218012.1 | serine O-acetyltransferase | - |
| X808_RS09065 () | 1910620..1911630 | - | 1011 | WP_025218013.1 | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase | - |
| X808_RS09070 () | 1911726..1912229 | - | 504 | WP_025218014.1 | protein-export chaperone SecB | - |
| X808_RS09075 () | 1912251..1912703 | - | 453 | WP_025218015.1 | rhodanese-like domain-containing protein | - |
| X808_RS09080 () | 1912794..1914092 | - | 1299 | WP_025218016.1 | trigger factor | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|