MGE detailed information
MGE type: Genomic_island MGE length: 16118 bp
Accession: NZ_CP006830 Location: 518493..534610 Organism: Escherichia coli APEC O18 Replicon: chromosome
Accession: NZ_CP006830 Location: 518493..534610 Organism: Escherichia coli APEC O18 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| APECO18_RS02840 () | 515308..516993 | - | 1686 | WP_001304373.1 | ABC transporter ATP-binding protein/permease | - |
| APECO18_RS26740 () | 517193..517318 | + | 126 | WP_122083086.1 | hypothetical protein | - |
| APECO18_RS02845 () | 517284..518441 | - | 1158 | WP_001362857.1 | anaerobic sulfatase maturase | - |
| APECO18_RS02850 () | 518493..520175 | - | 1683 | WP_001296072.1 | sulfatase | - |
| APECO18_RS02855 () | 520577..521338 | - | 762 | WP_000060449.1 | acid stress response transcriptional regulator YdeO | - |
| APECO18_RS02860 () | 521413..521610 | - | 198 | WP_000543391.1 | two-component system connector SafA | - |
| APECO18_RS02865 () | 521858..524137 | - | 2280 | WP_000726723.1 | acid resistance putative oxidoreductase YdeP | - |
| APECO18_RS02870 () | 524476..525390 | - | 915 | WP_000520594.1 | hypothetical protein | VF |
| APECO18_RS02875 () | 525450..525953 | - | 504 | WP_000825468.1 | hypothetical protein | VF |
| APECO18_RS02880 () | 525966..526496 | - | 531 | WP_000876778.1 | hypothetical protein | VF |
| APECO18_RS02885 () | 526510..529161 | - | 2652 | WP_001680454.1 | hypothetical protein | VF |
| APECO18_RS02890 () | 529203..529913 | - | 711 | WP_001195181.1 | hypothetical protein | VF |
| APECO18_RS02895 () | 530275..530838 | - | 564 | WP_001296074.1 | hypothetical protein | VF |
| APECO18_RS02905 () | 531614..532396 | - | 783 | WP_001221834.1 | SDR family oxidoreductase | - |
| APECO18_RS02910 () | 532506..532763 | + | 258 | WP_001210030.1 | hypothetical protein | - |
| APECO18_RS02915 () | 533022..534344 | - | 1323 | WP_001125475.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| APECO18_RS02920 () | 534344..534610 | - | 267 | WP_001332145.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| APECO18_RS02925 () | 534918..535676 | + | 759 | WP_001286588.1 | trans-aconitate 2-methyltransferase | - |
| APECO18_RS02930 () | 535680..536594 | - | 915 | WP_001306069.1 | bestrophin family protein | - |
| APECO18_RS02940 () | 536791..538242 | - | 1452 | WP_000854637.1 | tagaturonate reductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli Nissle 1917 | Genomic island | TA10098 | NZ_CP007799 | 1694571..1711514 | 0.007 |