MGE detailed information
MGE type: Genomic_island MGE length: 11686 bp
Accession: NZ_CP006830 Location: 4101481..4113166 Organism: Escherichia coli APEC O18 Replicon: chromosome
Accession: NZ_CP006830 Location: 4101481..4113166 Organism: Escherichia coli APEC O18 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| APECO18_RS26925 () | 4096651..4096809 | - | 159 | WP_014639450.1 | hypothetical protein | - |
| APECO18_RS20350 () | 4096888..4098600 | - | 1713 | Protein_3852 | flagellar biosynthesis protein FlhA | - |
| APECO18_RS20355 () | 4098572..4099357 | + | 786 | WP_047340729.1 | putative lateral flagellar export/assembly protein LafU | - |
| APECO18_RS20360 () | 4099512..4101056 | + | 1545 | WP_047340683.1 | recombinase family protein | - |
| APECO18_RS20365 () | 4101481..4102023 | - | 543 | WP_047340684.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| APECO18_RS20370 () | 4104062..4104619 | + | 558 | WP_047340685.1 | hypothetical protein | - |
| APECO18_RS20375 () | 4104620..4104898 | + | 279 | WP_047340686.1 | hypothetical protein | - |
| APECO18_RS20380 () | 4104898..4105113 | + | 216 | WP_023277948.1 | hypothetical protein | - |
| APECO18_RS20385 () | 4105110..4105397 | + | 288 | WP_044861732.1 | HNH endonuclease | - |
| APECO18_RS20390 () | 4105554..4105877 | + | 324 | WP_047340687.1 | hypothetical protein | - |
| APECO18_RS20395 () | 4106350..4107060 | + | 711 | WP_047340688.1 | hypothetical protein | - |
| APECO18_RS20400 () | 4107069..4107485 | + | 417 | WP_047340689.1 | hypothetical protein | - |
| APECO18_RS26265 () | 4107509..4107712 | + | 204 | WP_073268666.1 | hypothetical protein | - |
| APECO18_RS20405 () | 4107827..4109917 | + | 2091 | WP_047340690.1 | tape measure protein | - |
| APECO18_RS20410 () | 4110074..4110847 | + | 774 | WP_047340691.1 | hypothetical protein | - |
| APECO18_RS20415 () | 4110906..4111958 | + | 1053 | WP_023277943.1 | DNA polymerase IV | - |
| APECO18_RS20420 () | 4112010..4112303 | + | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| APECO18_RS20425 () | 4112306..4112704 | + | 399 | WP_047340692.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| APECO18_RS20430 () | 4112714..4113166 | + | 453 | WP_001059895.1 | GNAT family N-acetyltransferase | - |
| APECO18_RS20435 () | 4113356..4114495 | + | 1140 | WP_000521577.1 | RNA ligase RtcB family protein | - |
| APECO18_RS20440 () | 4114492..4115106 | + | 615 | WP_000602123.1 | peptide chain release factor H | - |
| APECO18_RS20445 () | 4115163..4116620 | - | 1458 | WP_001292999.1 | cytosol nonspecific dipeptidase | - |
| APECO18_RS20450 () | 4116881..4117339 | + | 459 | WP_001291988.1 | xanthine phosphoribosyltransferase | - |
| - () | 4117935..4118015 | + | 81 | NuclAT_4 | - | - |
| - () | 4117935..4118015 | + | 81 | NuclAT_4 | - | - |
| - () | 4117935..4118015 | + | 81 | NuclAT_4 | - | - |
| - () | 4117935..4118015 | + | 81 | NuclAT_4 | - | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|