MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 36830 bp
Accession: NZ_CP006827 Location: 1042825..1079654 Organism: Helicobacter pylori oki898 Replicon: chromosome
Accession: NZ_CP006827 Location: 1042825..1079654 Organism: Helicobacter pylori oki898 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HPOKI898_RS04885 () | 1039853..1040929 | + | 1077 | WP_025277004.1 | hypothetical protein | - |
| HPOKI898_RS04890 () | 1040942..1042417 | + | 1476 | WP_025276140.1 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | - |
| HPOKI898_RS04895 () | 1042432..1042713 | + | 282 | WP_025276141.1 | Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC | - |
| HPOKI898_RS04900 () | 1042810..1044129 | - | 1320 | WP_025277005.1 | adenosylmethionine--8-amino-7-oxononanoate transaminase | - |
| HPOKI898_RS04905 () | 1044259..1045722 | + | 1464 | WP_025277006.1 | peptidylprolyl isomerase | - |
| HPOKI898_RS04910 () | 1045738..1047219 | + | 1482 | WP_025277007.1 | cell division protein FtsA | - |
| HPOKI898_RS04915 () | 1047350..1048507 | + | 1158 | WP_000233623.1 | cell division protein FtsZ | - |
| HPOKI898_RS04920 () | 1048865..1049758 | - | 894 | WP_025276145.1 | hypothetical protein | - |
| HPOKI898_RS04925 () | 1049740..1050272 | - | 533 | Protein_943 | hypothetical protein | - |
| HPOKI898_RS04930 () | 1050437..1051261 | - | 825 | WP_025276146.1 | mechanosensitive ion channel family protein | - |
| HPOKI898_RS08255 () | 1051475..1051598 | - | 124 | Protein_945 | DNA adenine methylase | - |
| HPOKI898_RS04935 () | 1051868..1052154 | - | 287 | Protein_946 | hypothetical protein | - |
| HPOKI898_RS04940 () | 1052205..1052762 | - | 558 | WP_025277008.1 | hypothetical protein | - |
| HPOKI898_RS04950 () | 1053458..1054531 | + | 1074 | WP_025276147.1 | Tyrosine recombinase XerH ; Integrase | Integrase |
| HPOKI898_RS04955 () | 1054611..1055294 | - | 684 | WP_025277010.1 | hypothetical protein | - |
| HPOKI898_RS04960 () | 1055366..1056628 | - | 1263 | WP_025277011.1 | P-type conjugative transfer protein TrbL | - |
| HPOKI898_RS08365 () | 1056768..1056908 | - | 141 | WP_162966674.1 | hypothetical protein | - |
| HPOKI898_RS04970 () | 1056960..1058358 | - | 1399 | Protein_952 | hypothetical protein | - |
| HPOKI898_RS04975 () | 1058362..1060545 | - | 2184 | WP_025277012.1 | hypothetical protein | - |
| HPOKI898_RS04980 () | 1060584..1061981 | - | 1398 | WP_025276151.1 | hypothetical protein | - |
| HPOKI898_RS04985 () | 1061988..1063001 | - | 1014 | WP_025276152.1 | DUF1738 domain-containing protein | - |
| HPOKI898_RS08370 () | 1062994..1063140 | - | 147 | WP_162966675.1 | hypothetical protein | - |
| HPOKI898_RS04990 () | 1063631..1069936 | + | 6306 | Protein_957 | DEAD/DEAH box helicase family protein | - |
| HPOKI898_RS04995 () | 1070013..1070231 | + | 219 | WP_000906664.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| HPOKI898_RS05000 () | 1070224..1070418 | + | 195 | WP_001114660.1 | type II toxin-antitoxin system HicA family toxin | - |
| HPOKI898_RS05005 () | 1070415..1071053 | + | 639 | WP_025276154.1 | IS607 family transposase ISCbo10 | Transposase |
| HPOKI898_RS05010 () | 1071040..1072269 | + | 1230 | WP_025277014.1 | IS607 family transposase ISTvo1 | Transposase |
| HPOKI898_RS08105 () | 1072341..1074116 | + | 1776 | Protein_962 | helicase | - |
| HPOKI898_RS05025 () | 1074383..1075039 | + | 657 | WP_025277015.1 | ParA family protein | - |
| HPOKI898_RS05030 () | 1075121..1075405 | + | 285 | WP_000394639.1 | hypothetical protein ; Integrase | Integrase |
| HPOKI898_RS05035 () | 1075437..1076621 | + | 1185 | WP_025276157.1 | hypothetical protein | - |
| HPOKI898_RS05040 () | 1076646..1078533 | - | 1888 | Protein_966 | relaxase/mobilization nuclease domain-containing protein | - |
| HPOKI898_RS05045 () | 1078792..1079106 | + | 315 | WP_025276158.1 | hypothetical protein | Antitoxin Detail |
| HPOKI898_RS05050 () | 1079099..1079380 | + | 282 | WP_015086299.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| HPOKI898_RS05055 () | 1079651..1081378 | - | 1728 | WP_025276159.1 | type IV secretory system conjugative DNA transfer family protein | - |
| HPOKI898_RS05060 () | 1081379..1081936 | - | 558 | WP_025277016.1 | hypothetical protein | - |
| HPOKI898_RS05065 () | 1081937..1082227 | - | 291 | WP_000159826.1 | hypothetical protein | - |
| HPOKI898_RS05070 () | 1082224..1082679 | - | 456 | WP_025276161.1 | hypothetical protein | - |
| HPOKI898_RS05075 () | 1082676..1083617 | - | 942 | WP_025276162.1 | Flp pilus assembly complex ATPase component TadA | - |
| HPOKI898_RS05080 () | 1083617..1083915 | - | 299 | Protein_974 | hypothetical protein | - |
| HPOKI898_RS05085 () | 1083912..1084175 | - | 264 | WP_025276164.1 | hypothetical protein | - |
| HPOKI898_RS05090 () | 1084168..1084461 | - | 294 | WP_025276165.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|