MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 71523 bp
Accession: NZ_CP006750 Location: 1..71523 Organism: Yersinia pestis 3770 Replicon: plasmid pCD1
Accession: NZ_CP006750 Location: 1..71523 Organism: Yersinia pestis 3770 Replicon: plasmid pCD1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M483_RS00780 () | 118..2433 | - | 2316 | WP_011901828.1 | Tn3 family transposase ISEc63 | Transposase |
| M483_RS00785 () | 2597..3148 | + | 552 | WP_002213258.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| M483_RS00790 () | 3167..3631 | + | 465 | WP_002224338.1 | hypothetical protein | - |
| M483_RS00795 () | 3770..4099 | + | 330 | WP_002229829.1 | hypothetical protein | - |
| M483_RS00805 () | 4199..5298 | + | 1100 | WP_086016640.1 | IS3 family transposase ISYpe1 | Transposase |
| M483_RS00810 () | 5446..5871 | - | 426 | WP_002213267.1 | hypothetical protein | VF |
| M483_RS00815 () | 6248..6646 | - | 399 | Protein_7 | IS21 family transposase IS21 | Transposase |
| M483_RS00820 () | 6646..7818 | - | 1173 | WP_002220893.1 | IS21 family transposase IS21 | Transposase |
| M483_RS00825 () | 7921..8565 | + | 645 | Protein_9 | IS3 family transposase ISYen3 | Transposase |
| M483_RS00830 () | 8628..9020 | - | 393 | WP_002213403.1 | YopE regulator | VF |
| M483_RS00835 () | 9214..9873 | + | 660 | WP_002229754.1 | Outer membrane virulence protein YopE | VF |
| M483_RS00840 () | 10013..10312 | - | 300 | WP_002213360.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| M483_RS00845 () | 10305..10547 | - | 243 | WP_002224342.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| M483_RS23440 () | 10713..11005 | - | 293 | Protein_14 | IS6 family transposase ISEas1 | Transposase |
| M483_RS24475 () | 11093..11266 | + | 174 | WP_002213357.1 | hypothetical protein | - |
| M483_RS00850 () | 11721..12686 | - | 966 | WP_002213354.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| M483_RS00855 () | 12683..13849 | - | 1167 | WP_002220902.1 | Sporulation initiation inhibitor protein Soj | VF |
| M483_RS23790 () | 14609..15754 | - | 1146 | Protein_18 | IS3 family transposase | - |
| M483_RS00875 () | 15861..16490 | - | 630 | WP_002229770.1 | hypothetical protein | - |
| M483_RS23450 () | 16636..16929 | - | 294 | Protein_20 | IS3 family transposase | - |
| M483_RS00880 () | 17088..17636 | - | 549 | WP_002213007.1 | hypothetical protein | VF |
| M483_RS22135 () | 18136..19103 | + | 968 | Protein_22 | Cysteine protease YopT | VF |
| M483_RS00895 () | 19103..19501 | + | 399 | WP_002213004.1 | Chaperone protein SycT | VF |
| M483_RS22140 () | 19907..20188 | + | 282 | Protein_24 | DDE-type integrase/transposase/recombinase | - |
| M483_RS00905 () | 20206..20625 | + | 420 | WP_002222515.1 | hypothetical protein | - |
| M483_RS23795 () | 21153..21371 | - | 219 | Protein_26 | IS6 family transposase | - |
| M483_RS23800 () | 21374..21619 | + | 246 | WP_116442925.1 | transposase | - |
| M483_RS00910 () | 21501..21818 | + | 318 | Protein_28 | IS256 family transposase ISSod4 | Transposase |
| M483_RS00915 () | 21861..23090 | - | 1230 | WP_002229779.1 | Outer membrane protein YopM | VF |
| M483_RS00920 () | 23484..23693 | - | 210 | WP_002229781.1 | hypothetical protein | - |
| M483_RS23455 () | 23714..24351 | + | 638 | Protein_31 | IS6 family transposase | - |
| M483_RS00925 () | 24391..25599 | - | 1209 | WP_002209743.1 | IS256 family transposase ISEc39 | Transposase |
| M483_RS00930 () | 26142..27062 | - | 921 | WP_002212987.1 | Protein YopD | VF |
| M483_RS00935 () | 27081..28286 | - | 1206 | WP_002212985.1 | Protein YopB | VF |
| M483_RS00940 () | 28264..28770 | - | 507 | WP_002222758.1 | Chaperone protein IpgC | VF |
| M483_RS00945 () | 28783..29763 | - | 981 | WP_002212981.1 | Virulence-associated V antigen | VF |
| M483_RS00950 () | 29765..30052 | - | 288 | WP_002212973.1 | hypothetical protein | VF |
| M483_RS00955 () | 30094..30534 | - | 441 | WP_002220918.1 | hypothetical protein | VF |
| M483_RS00960 () | 30531..32645 | - | 2115 | WP_002212971.1 | Invasion protein InvA | VF |
| M483_RS00965 () | 32632..32976 | - | 345 | WP_002229791.1 | Chaperone protein YscY | VF |
| M483_RS00970 () | 32973..33341 | - | 369 | WP_002212969.1 | Yop proteins translocation protein X | VF |
| M483_RS00975 () | 33338..33709 | - | 372 | WP_002229794.1 | Chaperone protein SycN | VF |
| M483_RS00980 () | 33696..33974 | - | 279 | WP_002212965.1 | Protein TyeA | VF |
| M483_RS00985 () | 33955..34836 | - | 882 | WP_002212958.1 | Outer membrane protein YopN | VF |
| M483_RS00990 () | 35034..36353 | + | 1320 | WP_011901825.1 | putative ATP synthase YscN | VF |
| M483_RS00995 () | 36350..36814 | + | 465 | WP_002212952.1 | Yop proteins translocation protein O | VF |
| M483_RS01000 () | 36814..38181 | + | 1368 | WP_011901824.1 | hypothetical protein | VF |
| M483_RS01005 () | 38178..39101 | + | 924 | WP_002212948.1 | Yop proteins translocation protein Q | VF |
| M483_RS01010 () | 39098..39751 | + | 654 | WP_002212947.1 | Surface presentation of antigens protein SpaP | VF |
| M483_RS01015 () | 39753..40019 | + | 267 | WP_002212945.1 | hypothetical protein | VF |
| M483_RS01020 () | 40016..40801 | + | 786 | WP_002212938.1 | Surface presentation of antigens protein SpaR | VF |
| M483_RS01025 () | 40801..41865 | + | 1065 | WP_011901823.1 | Yop proteins translocation protein U | VF |
| M483_RS01030 () | 42440..42835 | + | 396 | WP_002222527.1 | Exoenzyme S synthesis protein B | VF |
| M483_RS01035 () | 42959..43774 | + | 816 | WP_002212931.1 | Virulence regulon transcriptional activator VirF | VF |
| M483_RS01040 () | 43853..43951 | + | 99 | WP_002229797.1 | type III secretion system protein YscA | - |
| M483_RS01045 () | 44177..44590 | + | 414 | WP_002212925.1 | Chaperone protein YscB | VF |
| M483_RS01050 () | 44596..46419 | + | 1824 | WP_002212923.1 | Yop proteins translocation protein C | VF |
| M483_RS01055 () | 46416..47675 | + | 1260 | WP_002212919.1 | Yop proteins translocation protein D | VF |
| M483_RS01060 () | 47672..47872 | + | 201 | WP_002212917.1 | Putative Yop proteins translocation protein E | VF |
| M483_RS01065 () | 47873..48136 | + | 264 | WP_002212916.1 | Yop proteins translocation protein F | VF |
| M483_RS01070 () | 48138..48485 | + | 348 | WP_011901822.1 | Putative Yop proteins translocation protein G | VF |
| M483_RS01075 () | 48482..48979 | + | 498 | WP_002212915.1 | Yop proteins translocation protein H | VF |
| M483_RS01080 () | 48980..49327 | + | 348 | WP_002212914.1 | Yop proteins translocation protein I | VF |
| M483_RS01085 () | 49334..50068 | + | 735 | WP_002212912.1 | Yop proteins translocation lipoprotein J | VF |
| M483_RS01090 () | 50068..50697 | + | 630 | WP_002361471.1 | Yop proteins translocation protein K | VF |
| M483_RS01095 () | 50643..51308 | + | 666 | WP_010981371.1 | Yop proteins translocation protein L | VF |
| M483_RS01100 () | 51533..51880 | + | 348 | WP_002212907.1 | Yop proteins translocation protein M | VF |
| M483_RS23810 () | 52428..53289 | + | 862 | Protein_68 | IS3 family transposase | - |
| M483_RS01120 () | 53413..54435 | + | 1023 | WP_050882092.1 | IS21 family transposase IS100kyp | Transposase |
| M483_RS01125 () | 54435..55214 | + | 780 | WP_001297096.1 | IS21 family transposase IS100kyp | Transposase |
| M483_RS01130 () | 55280..55417 | + | 138 | Protein_71 | transposase | - |
| M483_RS22170 () | 55436..55708 | + | 273 | Protein_72 | transposase | - |
| M483_RS01135 () | 55929..57335 | - | 1407 | WP_011901819.1 | Tyrosine-protein phosphatase YopH | VF |
| M483_RS01140 () | 57618..57851 | - | 234 | Protein_74 | transposase domain-containing protein | - |
| M483_RS01145 () | 57854..58432 | + | 579 | Protein_75 | IS3 family transposase ISYpe1 | Transposase |
| M483_RS01150 () | 59018..59884 | - | 867 | WP_002213287.1 | Effector protein YopJ | VF |
| M483_RS01155 () | 60280..62478 | - | 2199 | WP_002213290.1 | Protein kinase YpkA | VF |
| M483_RS01160 () | 62496..62924 | - | 429 | WP_002233145.1 | hypothetical protein | VF |
| M483_RS23460 () | 63180..63492 | - | 313 | Protein_79 | IS3 family transposase ISKpn37 | Transposase |
| M483_RS22185 () | 63670..63909 | - | 240 | WP_002213291.1 | hypothetical protein | - |
| M483_RS01170 () | 65082..65960 | - | 879 | WP_002213292.1 | incFII family plasmid replication initiator RepA | - |
| M483_RS01175 () | 65941..66015 | - | 75 | WP_002233140.1 | RepA leader peptide Tap | - |
| M483_RS01180 () | 66257..66511 | - | 255 | WP_002229817.1 | replication regulatory protein RepA | - |
| M483_RS01185 () | 66649..66897 | - | 249 | WP_002233137.1 | Phospholipase D | VF |
| M483_RS22195 () | 67023..67331 | + | 309 | Protein_85 | DDE-type integrase/transposase/recombinase | - |
| M483_RS23820 () | 67314..67721 | - | 408 | WP_002213294.1 | IS3 family transposase ISKpn37 | Transposase |
| M483_RS01195 () | 67745..68062 | - | 318 | WP_002213008.1 | IS3 family transposase ISKpn37 | Transposase |
| M483_RS01200 () | 68234..68692 | - | 459 | WP_002213246.1 | hypothetical protein | - |
| M483_RS01205 () | 68761..69030 | + | 270 | WP_042469136.1 | transposase | - |
| M483_RS24480 () | 69128..69286 | - | 159 | Protein_90 | EamA family transporter | - |
| M483_RS22205 () | 69356..70659 | - | 1304 | Protein_91 | Adhesin YadA | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|