MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 67282 bp
Accession: NZ_CP006725 Location: 1..67282 Organism: Leptospira interrogans serovar Linhai str. 56609 Replicon: plasmid lcp1
Accession: NZ_CP006725 Location: 1..67282 Organism: Leptospira interrogans serovar Linhai str. 56609 Replicon: plasmid lcp1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LIL_RS20140 () | 1..753 | + | 753 | WP_000691797.1 | AAA family ATPase | - |
| LIL_RS20145 () | 737..1366 | + | 630 | WP_000818557.1 | DUF3102 domain-containing protein | - |
| LIL_RS20150 () | 1836..3278 | + | 1443 | WP_045193664.1 | DNA-binding protein | - |
| LIL_RS20155 () | 3461..4084 | - | 624 | WP_045193666.1 | tetratricopeptide repeat protein | - |
| LIL_RS20160 () | 4094..5464 | - | 1371 | WP_017853596.1 | hypothetical protein | - |
| LIL_RS20165 () | 5461..6345 | - | 885 | WP_045193673.1 | hypothetical protein | - |
| LIL_RS20170 () | 6780..13808 | + | 7029 | WP_045193676.1 | type IV secretion protein Rhs | - |
| LIL_RS20175 () | 13805..14356 | + | 552 | WP_001242898.1 | hypothetical protein | - |
| LIL_RS20180 () | 14377..14811 | + | 435 | WP_002115755.1 | hypothetical protein | - |
| LIL_RS20185 () | 14808..15437 | + | 630 | WP_000828315.1 | hypothetical protein | - |
| LIL_RS20190 () | 15452..15964 | + | 513 | WP_045193680.1 | hypothetical protein | - |
| LIL_RS20195 () | 15943..16632 | + | 690 | WP_002100463.1 | hypothetical protein | - |
| LIL_RS20200 () | 16672..17142 | + | 471 | WP_045193683.1 | hypothetical protein | - |
| LIL_RS20205 () | 17513..17806 | + | 294 | WP_002109568.1 | hypothetical protein | - |
| LIL_RS20210 () | 17976..19172 | - | 1197 | WP_045193685.1 | helix-turn-helix domain-containing protein | - |
| LIL_RS20215 () | 19192..19419 | - | 228 | WP_002079946.1 | hypothetical protein | - |
| LIL_RS20220 () | 19676..20056 | + | 381 | WP_000410390.1 | hypothetical protein | - |
| LIL_RS20225 () | 20063..20962 | - | 900 | WP_045193688.1 | hypothetical protein | - |
| LIL_RS20230 () | 20987..21607 | - | 621 | WP_045193691.1 | hypothetical protein | - |
| LIL_RS20235 () | 22576..22953 | + | 378 | WP_001130057.1 | hypothetical protein | - |
| LIL_RS20240 () | 22950..23147 | + | 198 | WP_025184602.1 | hypothetical protein | - |
| LIL_RS20250 () | 23368..23742 | + | 375 | WP_004764973.1 | hypothetical protein | - |
| LIL_RS20265 () | 24476..24667 | + | 192 | WP_001127184.1 | hypothetical protein | - |
| LIL_RS20270 () | 24664..25503 | + | 840 | WP_045193704.1 | hypothetical protein | - |
| LIL_RS24730 () | 25500..25655 | + | 156 | WP_164481380.1 | hypothetical protein | - |
| LIL_RS20275 () | 25659..25844 | + | 186 | WP_001002904.1 | hypothetical protein | - |
| LIL_RS20285 () | 26103..26330 | + | 228 | WP_000513522.1 | hypothetical protein | - |
| LIL_RS20290 () | 26344..26712 | + | 369 | WP_002110364.1 | DUF736 family protein | - |
| LIL_RS20295 () | 26899..28062 | + | 1164 | WP_045193713.1 | hypothetical protein | Relaxase |
| LIL_RS20300 () | 28366..28938 | + | 573 | WP_000612729.1 | hypothetical protein | - |
| LIL_RS20305 () | 29049..30155 | + | 1107 | WP_042752616.1 | hypothetical protein | - |
| LIL_RS20310 () | 30155..30442 | + | 288 | WP_001085711.1 | hypothetical protein | - |
| LIL_RS20315 () | 30435..31055 | + | 621 | WP_001085187.1 | hypothetical protein | - |
| LIL_RS20320 () | 31092..31775 | + | 684 | WP_001190178.1 | hypothetical protein | - |
| LIL_RS20325 () | 31848..32243 | + | 396 | WP_000459978.1 | hypothetical protein | - |
| LIL_RS20330 () | 32253..32948 | + | 696 | WP_000382426.1 | hypothetical protein | - |
| LIL_RS20335 () | 32948..34474 | + | 1527 | WP_045193718.1 | hypothetical protein | - |
| LIL_RS20340 () | 34479..34931 | + | 453 | WP_001054099.1 | DUF882 domain-containing protein | - |
| LIL_RS20345 () | 34938..35543 | + | 606 | WP_000432834.1 | hypothetical protein | - |
| LIL_RS20350 () | 35540..35902 | + | 363 | WP_000821938.1 | hypothetical protein | - |
| LIL_RS20355 () | 35895..36275 | + | 381 | WP_045193734.1 | hypothetical protein | - |
| LIL_RS20360 () | 36275..36718 | + | 444 | WP_045193722.1 | hypothetical protein | - |
| LIL_RS20365 () | 36725..37186 | + | 462 | WP_001115249.1 | hypothetical protein | - |
| LIL_RS20370 () | 37186..37620 | + | 435 | WP_002110375.1 | M15 family metallopeptidase | - |
| LIL_RS20375 () | 37825..38058 | + | 234 | WP_045193725.1 | hypothetical protein | - |
| LIL_RS20380 () | 38360..38548 | + | 189 | WP_000425065.1 | hypothetical protein | - |
| LIL_RS20385 () | 39211..39516 | + | 306 | WP_000844596.1 | hypothetical protein | - |
| LIL_RS23860 () | 39489..40175 | + | 687 | WP_082271315.1 | restriction endonuclease | - |
| LIL_RS20395 () | 40480..40728 | + | 249 | WP_000648189.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Toxin Detail |
| LIL_RS20400 () | 40722..41045 | + | 324 | WP_000237066.1 | type II toxin-antitoxin system PemK/MazF family toxin | Antitoxin Detail |
| LIL_RS20405 () | 41168..41338 | + | 171 | WP_002077237.1 | hypothetical protein | - |
| LIL_RS20410 () | 41422..41799 | - | 378 | WP_000603456.1 | hypothetical protein | - |
| LIL_RS24735 () | 42413..42553 | + | 141 | WP_002077221.1 | hypothetical protein | - |
| LIL_RS20415 () | 42729..43182 | + | 454 | Protein_53 | hypothetical protein | - |
| LIL_RS20430 () | 44740..46458 | - | 1719 | WP_000528390.1 | EAL domain-containing protein | - |
| LIL_RS20440 () | 46904..48878 | + | 1975 | Protein_56 | WGR domain-containing protein | - |
| LIL_RS24385 () | 49421..49570 | + | 150 | Protein_57 | IS982 family transposase | - |
| LIL_RS20445 () | 49601..50803 | - | 1203 | WP_002109366.1 | DUF1566 domain-containing protein | - |
| LIL_RS20450 () | 51343..51699 | - | 357 | WP_000651720.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| LIL_RS20455 () | 51696..51956 | - | 261 | WP_000048262.1 | type II toxin-antitoxin system HicA family toxin | - |
| LIL_RS20460 () | 52695..53564 | - | 870 | WP_045193728.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| LIL_RS20475 () | 57129..58031 | - | 903 | WP_002184728.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| LIL_RS20480 () | 58619..58969 | + | 351 | WP_000594550.1 | hypothetical protein | - |
| LIL_RS20485 () | 59287..60177 | + | 891 | WP_001064148.1 | RNA polymerase sigma factor | - |
| LIL_RS20490 () | 61332..62474 | - | 1143 | WP_025180777.1 | cytochrome c554 and C-prime | - |
| LIL_RS20495 () | 62477..63709 | - | 1233 | WP_001969214.1 | SH3 domain-containing protein | - |
| LIL_RS20500 () | 64275..65486 | - | 1212 | WP_045193729.1 | helix-turn-helix domain-containing protein | - |
| LIL_RS24400 () | 65489..65644 | + | 156 | WP_002075097.1 | hypothetical protein | - |
| LIL_RS20510 () | 66493..66870 | + | 378 | WP_000105514.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|