MGE detailed information
MGE type: Prophage MGE length: 36697 bp
Accession: NZ_CP006696 Location: 635034..671730 Organism: Xylella fastidiosa subsp. sandyi Ann-1 Replicon: chromosome
Accession: NZ_CP006696 Location: 635034..671730 Organism: Xylella fastidiosa subsp. sandyi Ann-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D934_RS02595 () | 630505..631164 | - | 660 | WP_020851872.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| D934_RS02600 () | 631276..633168 | - | 1893 | WP_020851873.1 | phosphogluconate dehydratase | - |
| D934_RS02605 () | 633308..634027 | - | 720 | WP_020851874.1 | 6-phosphogluconolactonase | - |
| D934_RS02610 () | 634024..635037 | - | 1014 | WP_020851875.1 | glucokinase | - |
| D934_RS02615 () | 635034..636467 | - | 1434 | WP_024748964.1 | glucose-6-phosphate dehydrogenase | - |
| D934_RS02620 () | 636796..637890 | + | 1095 | WP_024748965.1 | sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC | - |
| D934_RS02625 () | 638035..638838 | - | 804 | WP_024748966.1 | folate-binding protein YgfZ | - |
| D934_RS02630 () | 639123..639341 | + | 219 | WP_011097601.1 | DUF1674 domain-containing protein | - |
| D934_RS02635 () | 639399..639794 | + | 396 | WP_024748967.1 | succinate dehydrogenase, cytochrome b556 subunit | - |
| D934_RS02640 () | 639791..640174 | + | 384 | WP_004085197.1 | succinate dehydrogenase, hydrophobic membrane anchor protein | - |
| D934_RS02645 () | 640182..641972 | + | 1791 | WP_020851880.1 | succinate dehydrogenase flavoprotein subunit | - |
| D934_RS02650 () | 641993..642778 | + | 786 | WP_020851881.1 | succinate dehydrogenase iron-sulfur subunit | - |
| D934_RS02655 () | 642899..643147 | + | 249 | WP_004089280.1 | succinate dehydrogenase assembly factor 2 | - |
| D934_RS02660 () | 643170..643550 | + | 381 | WP_011097604.1 | hypothetical protein | - |
| D934_RS02665 () | 643576..644817 | + | 1242 | WP_020851882.1 | lipoprotein-releasing ABC transporter permease subunit | - |
| D934_RS02670 () | 644810..645532 | + | 723 | WP_020851883.1 | lipoprotein-releasing ABC transporter ATP-binding protein LolD | - |
| D934_RS02675 () | 645879..648356 | + | 2478 | WP_020851884.1 | DNA internalization-related competence protein ComEC/Rec2 | - |
| D934_RS02680 () | 648341..649003 | + | 663 | WP_020851885.1 | MotA/TolQ/ExbB proton channel family protein | - |
| D934_RS02685 () | 649008..649445 | + | 438 | WP_004089267.1 | biopolymer transporter ExbD | - |
| D934_RS02690 () | 649463..651211 | + | 1749 | WP_020851886.1 | lipid A export permease/ATP-binding protein MsbA | - |
| D934_RS02695 () | 651208..652227 | + | 1020 | WP_020851887.1 | tetraacyldisaccharide 4'-kinase | - |
| D934_RS02700 () | 652636..653718 | - | 1083 | WP_020850949.1 | phage late control D family protein | - |
| D934_RS02705 () | 653709..653927 | - | 219 | WP_020850950.1 | tail protein X | - |
| D934_RS02710 () | 653924..654410 | - | 487 | Protein_496 | phage tail protein | - |
| D934_RS02715 () | 654407..656626 | - | 2220 | WP_020850952.1 | phage tail tape measure protein | - |
| D934_RS02720 () | 656753..657040 | - | 288 | WP_012337638.1 | phage tail assembly protein | - |
| D934_RS02725 () | 657043..657552 | - | 510 | WP_004086986.1 | phage major tail tube protein | - |
| D934_RS02730 () | 657552..658730 | - | 1179 | WP_020850953.1 | phage tail sheath family protein | - |
| D934_RS02735 () | 658795..660387 | - | 1593 | WP_024748652.1 | tail fiber domain-containing protein | - |
| D934_RS02740 () | 660395..660952 | - | 558 | WP_020852723.1 | phage tail protein I | - |
| D934_RS02745 () | 660945..661838 | - | 894 | WP_020850956.1 | baseplate J/gp47 family protein | - |
| D934_RS02750 () | 661838..662176 | - | 339 | WP_004088650.1 | GPW/gp25 family protein | - |
| D934_RS02755 () | 662326..662589 | + | 264 | WP_020853122.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| D934_RS02760 () | 662576..662857 | + | 282 | WP_020853121.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| D934_RS02765 () | 662894..663481 | - | 588 | WP_024748577.1 | phage baseplate assembly protein V | - |
| D934_RS02770 () | 663478..664020 | - | 543 | WP_020850961.1 | hypothetical protein | - |
| D934_RS02775 () | 663996..664517 | - | 522 | WP_020850962.1 | hypothetical protein | - |
| D934_RS02780 () | 664514..664837 | - | 324 | WP_020850963.1 | hypothetical protein | - |
| D934_RS02785 () | 664837..665097 | - | 261 | WP_020850964.1 | hypothetical protein | - |
| D934_RS02790 () | 665115..666989 | - | 1875 | WP_020850965.1 | phage major capsid protein | - |
| D934_RS02795 () | 666986..667618 | - | 633 | WP_020850966.1 | phage portal protein | - |
| D934_RS02800 () | 667642..668133 | + | 492 | Protein_514 | hypothetical protein | - |
| D934_RS02805 () | 668130..668408 | + | 279 | WP_020850968.1 | VRR-NUC domain-containing protein | - |
| D934_RS14325 () | 668533..668700 | - | 168 | Protein_516 | DUF1640 domain-containing protein | - |
| D934_RS02815 () | 668770..669186 | - | 417 | WP_020850970.1 | hypothetical protein | - |
| D934_RS02820 () | 669271..669735 | + | 465 | Protein_518 | DEAD/DEAH box helicase | - |
| D934_RS02825 () | 670008..670649 | + | 642 | WP_020850972.1 | ParA family protein | - |
| D934_RS02830 () | 670677..671153 | + | 477 | WP_020850973.1 | histidine phosphatase family protein | - |
| D934_RS02835 () | 671158..671730 | + | 573 | WP_020850974.1 | YceI family protein | - |
| D934_RS02840 () | 671727..673685 | + | 1959 | WP_024749016.1 | phospholipase D family protein | - |
| D934_RS02845 () | 674618..675007 | - | 390 | WP_024749015.1 | helix-turn-helix domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|