MGE detailed information
MGE type: Prophage MGE length: 31492 bp
Accession: NZ_CP006636 Location: 1876776..1908267 Organism: Escherichia coli PCN061 Replicon: chromosome
Accession: NZ_CP006636 Location: 1876776..1908267 Organism: Escherichia coli PCN061 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PCN061_RS09500 () | 1872216..1873589 | + | 1374 | WP_001127216.1 | MFS transporter | - |
| PCN061_RS09505 () | 1873635..1874516 | - | 882 | WP_000984517.1 | protease HtpX | - |
| PCN061_RS09510 () | 1874708..1876756 | - | 2049 | WP_001055778.1 | carboxy terminal-processing peptidase | - |
| PCN061_RS09515 () | 1876776..1877474 | - | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| PCN061_RS09520 () | 1877571..1878068 | - | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
| PCN061_RS09525 () | 1878198..1879481 | + | 1284 | WP_001741872.1 | membrane integrity lipid transport subunit YebS | - |
| PCN061_RS09530 () | 1879450..1882083 | + | 2634 | WP_001297532.1 | hypothetical protein | VF |
| PCN061_RS09535 () | 1882163..1883602 | + | 1440 | WP_001338165.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| PCN061_RS09540 () | 1883720..1883956 | + | 237 | WP_001338166.1 | DUF1480 family protein | - |
| PCN061_RS09545 () | 1884061..1884252 | + | 192 | WP_001338167.1 | YebW family protein | - |
| PCN061_RS09550 () | 1884253..1884909 | - | 657 | WP_000812733.1 | protein-serine/threonine phosphatase | - |
| - () | 1885006..1885277 | + | 272 | - | - | Antitoxin Detail |
| - () | 1885044..1885147 | - | 104 | - | - | Toxin Detail |
| PCN061_RS09560 () | 1885305..1885646 | - | 342 | WP_000976472.1 | YebY family protein | - |
| PCN061_RS09565 () | 1885659..1886531 | - | 873 | WP_000879298.1 | copper homeostasis membrane protein CopD | - |
| PCN061_RS09570 () | 1886535..1886909 | - | 375 | WP_000255065.1 | CopC domain-containing protein YobA | - |
| PCN061_RS09575 () | 1887048..1887278 | + | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| PCN061_RS09580 () | 1887380..1888036 | + | 657 | WP_000011660.1 | carbon-nitrogen hydrolase family protein | - |
| PCN061_RS09585 () | 1888060..1888722 | + | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| PCN061_RS09590 () | 1888719..1890779 | - | 2061 | WP_047928768.1 | oligopeptidase B | - |
| PCN061_RS09595 () | 1890988..1891647 | - | 660 | WP_000024746.1 | tellurite resistance TerB family protein | - |
| PCN061_RS27665 () | 1891974..1892075 | - | 102 | Protein_1821 | hypothetical protein | - |
| PCN061_RS09610 () | 1892078..1892775 | - | 698 | Protein_1822 | IS1-like element IS1A family transposase | - |
| PCN061_RS09615 () | 1892804..1893107 | - | 304 | Protein_1823 | hypothetical protein | - |
| PCN061_RS09620 () | 1893174..1893464 | - | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| PCN061_RS09625 () | 1893598..1894776 | + | 1179 | WP_000173509.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| PCN061_RS09630 () | 1894832..1895473 | - | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| PCN061_RS09635 () | 1895510..1897321 | - | 1812 | WP_001069486.1 | phosphogluconate dehydratase | - |
| PCN061_RS09640 () | 1897556..1899031 | - | 1476 | WP_000301727.1 | glucose-6-phosphate dehydrogenase | - |
| PCN061_RS09650 () | 1899369..1900238 | + | 870 | WP_001056706.1 | DNA-binding transcriptional regulator HexR | - |
| PCN061_RS09655 () | 1900366..1901808 | + | 1443 | WP_000091148.1 | pyruvate kinase | - |
| PCN061_RS09660 () | 1901939..1902910 | - | 972 | WP_000448381.1 | Lipid A biosynthesis myristoyltransferase | VF |
| PCN061_RS09665 () | 1903030..1904352 | - | 1323 | WP_047928769.1 | murein DD-endopeptidase MepM | - |
| PCN061_RS09670 () | 1904368..1905300 | - | 933 | WP_001300644.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| PCN061_RS09675 () | 1905379..1906134 | + | 756 | WP_000202990.1 | Zinc import ATP-binding protein ZnuC | VF |
| PCN061_RS09680 () | 1906131..1906916 | + | 786 | WP_000571480.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| PCN061_RS09685 () | 1907257..1908267 | - | 1011 | WP_000568519.1 | Holliday junction branch migration DNA helicase RuvB | - |
| PCN061_RS09690 () | 1908276..1908887 | - | 612 | WP_000580327.1 | Holliday junction branch migration protein RuvA | - |
| PCN061_RS27675 () | 1909026..1909091 | - | 66 | WP_072094247.1 | stress response small protein YobI | - |
| PCN061_RS09695 () | 1909162..1909755 | + | 594 | WP_047928770.1 | YebB family permuted papain-like enzyme | - |
| PCN061_RS09700 () | 1909815..1911023 | + | 1209 | WP_001352368.1 | IS4-like element ISVsa5 family transposase | - |
| PCN061_RS09705 () | 1911104..1911625 | - | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| PCN061_RS09710 () | 1911660..1912400 | - | 741 | WP_000907234.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| PCN061_RS09715 () | 1912429..1912881 | - | 453 | WP_077788552.1 | dihydroneopterin triphosphate diphosphatase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|