MGE detailed information
MGE type: Prophage MGE length: 72987 bp
Accession: NZ_CP006569 Location: 3300574..3373560 Organism: Sodalis praecaptivus strain HS1 Replicon: chromosome
Accession: NZ_CP006569 Location: 3300574..3373560 Organism: Sodalis praecaptivus strain HS1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SANT_RS14555 () | 3295832..3297010 | + | 1179 | WP_025423006.1 | glycoside hydrolase family 88 protein | - |
| SANT_RS14560 () | 3297033..3297524 | + | 492 | WP_025423007.1 | PTS sugar transporter subunit IIB | - |
| SANT_RS14565 () | 3297544..3298350 | + | 807 | WP_025423008.1 | PTS sugar transporter subunit IIC | - |
| SANT_RS14570 () | 3298343..3299182 | + | 840 | WP_025423009.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| SANT_RS14575 () | 3299339..3300322 | + | 984 | WP_025423010.1 | hydroxyacid dehydrogenase | - |
| SANT_RS14580 () | 3300574..3301041 | - | 468 | WP_025423011.1 | glycoside hydrolase family protein | - |
| SANT_RS24195 () | 3302135..3302386 | + | 252 | WP_148296297.1 | hypothetical protein | - |
| SANT_RS14590 () | 3302885..3303340 | - | 456 | WP_148296298.1 | hypothetical protein | - |
| SANT_RS14595 () | 3304111..3304824 | + | 714 | WP_025423013.1 | helix-turn-helix transcriptional regulator | - |
| SANT_RS14600 () | 3306020..3306718 | + | 699 | WP_025423014.1 | helix-turn-helix transcriptional regulator | - |
| SANT_RS23470 () | 3307665..3308381 | + | 717 | WP_025423016.1 | PAS and helix-turn-helix domain-containing protein | - |
| SANT_RS24510 () | 3309456..3309587 | - | 132 | WP_158500173.1 | hypothetical protein | - |
| SANT_RS24200 () | 3309806..3310225 | + | 420 | WP_148296299.1 | hypothetical protein | - |
| SANT_RS14620 () | 3312306..3313019 | + | 714 | WP_025423018.1 | PAS and helix-turn-helix domain-containing protein | - |
| SANT_RS14625 () | 3313075..3313452 | - | 378 | WP_025423019.1 | hypothetical protein | - |
| SANT_RS14630 () | 3313629..3314741 | - | 1113 | WP_025423020.1 | acyltransferase | - |
| SANT_RS14640 () | 3315851..3316033 | - | 183 | WP_148296300.1 | hypothetical protein | - |
| SANT_RS14645 () | 3316219..3316932 | + | 714 | WP_025423023.1 | PAS and helix-turn-helix domain-containing protein | - |
| SANT_RS14650 () | 3316989..3317360 | - | 372 | WP_025423024.1 | hypothetical protein | - |
| SANT_RS14655 () | 3317494..3318306 | - | 813 | WP_025423025.1 | hypothetical protein | - |
| SANT_RS24210 () | 3318306..3320711 | - | 2406 | WP_025423026.1 | prophage tail fiber N-terminal domain-containing protein | - |
| SANT_RS22970 () | 3320777..3321766 | - | 990 | WP_148296301.1 | hypothetical protein | - |
| SANT_RS14670 () | 3321776..3322453 | - | 678 | WP_025423028.1 | hypothetical protein | - |
| SANT_RS14675 () | 3322456..3322734 | - | 279 | WP_038668632.1 | hypothetical protein | - |
| SANT_RS14680 () | 3322734..3325862 | - | 3129 | WP_025423029.1 | host specificity protein J | - |
| SANT_RS14685 () | 3326027..3326248 | + | 222 | WP_025423030.1 | hypothetical protein | - |
| SANT_RS14690 () | 3326380..3326721 | - | 342 | WP_025423031.1 | hypothetical protein | - |
| SANT_RS24515 () | 3326765..3327043 | - | 279 | WP_158500162.1 | hypothetical protein | - |
| SANT_RS14700 () | 3327451..3327822 | - | 372 | WP_025423033.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| SANT_RS14705 () | 3327819..3328043 | - | 225 | WP_025423034.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| SANT_RS22975 () | 3328197..3329117 | - | 921 | WP_025423035.1 | hypothetical protein | - |
| SANT_RS23480 () | 3329166..3329498 | - | 333 | WP_025423036.1 | hypothetical protein | - |
| SANT_RS14720 () | 3329580..3330143 | - | 564 | WP_025423037.1 | tail assembly protein | - |
| SANT_RS14725 () | 3330080..3330823 | - | 744 | WP_025423038.1 | C40 family peptidase | - |
| SANT_RS14730 () | 3330833..3331537 | - | 705 | WP_025423039.1 | phage minor tail protein L | - |
| SANT_RS14735 () | 3331559..3331888 | - | 330 | WP_025423040.1 | phage tail protein | - |
| SANT_RS22980 () | 3332176..3335355 | - | 3180 | WP_025423041.1 | phage tail tape measure protein | - |
| SANT_RS14745 () | 3335429..3335752 | - | 324 | WP_158500163.1 | DUF2513 domain-containing protein | - |
| SANT_RS14750 () | 3335840..3336073 | - | 234 | WP_025423043.1 | hypothetical protein | - |
| SANT_RS14755 () | 3336094..3336540 | - | 447 | WP_025423044.1 | hypothetical protein | - |
| SANT_RS14760 () | 3336583..3337527 | - | 945 | WP_025423045.1 | hypothetical protein | - |
| SANT_RS14765 () | 3337533..3337943 | - | 411 | WP_148296302.1 | hypothetical protein | - |
| SANT_RS14770 () | 3337953..3338402 | - | 450 | WP_025423047.1 | HK97 gp10 family phage protein | - |
| SANT_RS14775 () | 3338402..3338758 | - | 357 | WP_025423048.1 | hypothetical protein | - |
| SANT_RS14780 () | 3338760..3339242 | - | 483 | WP_025423049.1 | hypothetical protein | - |
| SANT_RS14785 () | 3339257..3339847 | - | 591 | WP_025423050.1 | hypothetical protein | - |
| SANT_RS14790 () | 3339829..3341280 | - | 1452 | WP_025423051.1 | glycosyltransferase family 2 protein | - |
| SANT_RS14795 () | 3341322..3342296 | - | 975 | WP_025423052.1 | hypothetical protein | - |
| SANT_RS14800 () | 3342437..3343006 | - | 570 | Protein_2887 | hypothetical protein | - |
| SANT_RS22985 () | 3343096..3343482 | - | 387 | WP_025423054.1 | hypothetical protein | - |
| SANT_RS14810 () | 3343549..3344616 | - | 1068 | WP_025423055.1 | minor capsid protein | - |
| SANT_RS14815 () | 3344597..3346006 | - | 1410 | WP_025423056.1 | DUF4055 domain-containing protein | - |
| SANT_RS14820 () | 3346008..3347489 | - | 1482 | WP_025423057.1 | terminase | - |
| SANT_RS14825 () | 3347489..3348007 | - | 519 | WP_025423058.1 | terminase small subunit | - |
| SANT_RS14830 () | 3348171..3348698 | - | 528 | WP_025423059.1 | Rha family transcriptional regulator | - |
| SANT_RS14835 () | 3349325..3349591 | - | 267 | WP_025423060.1 | hypothetical protein | - |
| SANT_RS14845 () | 3349733..3349978 | - | 246 | WP_051440240.1 | hypothetical protein | - |
| SANT_RS14850 () | 3350026..3350376 | - | 351 | WP_025423062.1 | hypothetical protein | - |
| SANT_RS14855 () | 3350373..3350840 | - | 468 | WP_025423063.1 | glycoside hydrolase family protein | - |
| SANT_RS14860 () | 3350837..3351100 | - | 264 | WP_025423064.1 | hypothetical protein | - |
| SANT_RS23870 () | 3351097..3351504 | - | 408 | WP_148296303.1 | hypothetical protein | - |
| SANT_RS14870 () | 3351650..3352060 | - | 411 | WP_025423066.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| SANT_RS14875 () | 3352109..3352285 | - | 177 | WP_025423067.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| SANT_RS14880 () | 3352480..3353280 | - | 801 | WP_200867250.1 | phage antirepressor KilAC domain-containing protein | - |
| SANT_RS14885 () | 3353292..3353840 | - | 549 | WP_038668639.1 | Bro-N domain-containing protein | - |
| SANT_RS22995 () | 3353869..3354501 | - | 633 | WP_051440179.1 | HNH endonuclease | - |
| SANT_RS14895 () | 3354596..3354991 | + | 396 | WP_038668642.1 | helix-turn-helix domain-containing protein | - |
| SANT_RS14900 () | 3354999..3355388 | - | 390 | WP_025423072.1 | antitermination protein | - |
| SANT_RS14905 () | 3355385..3355981 | - | 597 | WP_025423073.1 | recombination protein NinG | - |
| SANT_RS14910 () | 3356144..3356479 | - | 336 | WP_025423074.1 | hypothetical protein | - |
| SANT_RS14915 () | 3356489..3356938 | - | 450 | WP_025423075.1 | DUF1367 family protein | - |
| SANT_RS14920 () | 3356954..3357241 | - | 288 | WP_025423076.1 | hypothetical protein | - |
| SANT_RS14925 () | 3357333..3357587 | - | 255 | WP_025423077.1 | DUF4752 family protein | - |
| SANT_RS14930 () | 3357593..3357853 | - | 261 | WP_025423078.1 | hypothetical protein | - |
| SANT_RS14935 () | 3357850..3358050 | - | 201 | WP_025423079.1 | hypothetical protein | - |
| SANT_RS24220 () | 3358050..3358901 | - | 852 | WP_025423080.1 | ATP-binding protein | - |
| SANT_RS24225 () | 3358905..3359783 | - | 879 | WP_025423081.1 | replication protein | - |
| SANT_RS14950 () | 3359835..3360131 | - | 297 | WP_025423082.1 | hypothetical protein | - |
| SANT_RS23490 () | 3360276..3360491 | - | 216 | WP_071882034.1 | helix-turn-helix transcriptional regulator | - |
| SANT_RS14955 () | 3360607..3361275 | + | 669 | WP_025423083.1 | LexA family transcriptional regulator | - |
| SANT_RS14960 () | 3361609..3362232 | + | 624 | WP_025423084.1 | DUF4065 domain-containing protein | - |
| SANT_RS14965 () | 3362232..3362609 | + | 378 | WP_025423085.1 | hypothetical protein | - |
| SANT_RS14970 () | 3363325..3363573 | + | 249 | WP_025423086.1 | hypothetical protein | - |
| SANT_RS14975 () | 3363581..3364072 | + | 492 | WP_025423087.1 | hypothetical protein | - |
| SANT_RS23880 () | 3364109..3364492 | + | 384 | WP_025423088.1 | pentapeptide repeat-containing protein | - |
| SANT_RS14985 () | 3364555..3364983 | + | 429 | WP_038668649.1 | hypothetical protein | - |
| SANT_RS14990 () | 3365069..3365287 | + | 219 | WP_025423089.1 | hypothetical protein | - |
| SANT_RS24230 () | 3365442..3365810 | - | 369 | WP_148296304.1 | hypothetical protein | - |
| SANT_RS23495 () | 3366086..3366220 | + | 135 | WP_071882035.1 | protease FtsH-inhibitory lysogeny factor CIII | - |
| SANT_RS14995 () | 3366547..3367167 | + | 621 | WP_025423090.1 | ERF family protein | - |
| SANT_RS15000 () | 3367176..3367445 | + | 270 | WP_025423091.1 | hypothetical protein | - |
| SANT_RS15005 () | 3367744..3368049 | + | 306 | WP_025423092.1 | hypothetical protein | - |
| SANT_RS15010 () | 3368049..3368300 | + | 252 | WP_025423093.1 | hypothetical protein | - |
| SANT_RS15015 () | 3368293..3368772 | + | 480 | WP_025423094.1 | hypothetical protein | - |
| SANT_RS15020 () | 3368769..3369035 | + | 267 | WP_025423095.1 | hypothetical protein | - |
| SANT_RS15025 () | 3369032..3369730 | + | 699 | WP_025423096.1 | hypothetical protein | - |
| SANT_RS24235 () | 3369804..3369977 | + | 174 | WP_148296305.1 | ANR family transcriptional regulator | - |
| SANT_RS15035 () | 3370183..3370401 | + | 219 | WP_025423098.1 | hypothetical protein | - |
| SANT_RS24240 () | 3370585..3370800 | + | 216 | WP_051440182.1 | hypothetical protein | - |
| SANT_RS15050 () | 3371034..3372194 | + | 1161 | WP_025423100.1 | site-specific integrase | - |
| SANT_RS15060 () | 3372473..3373345 | + | 873 | WP_025423101.1 | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD | - |
| SANT_RS15065 () | 3373348..3373560 | + | 213 | WP_025423102.1 | ribosome-associated protein YbcJ | - |
| SANT_RS15070 () | 3373647..3375032 | - | 1386 | WP_025423103.1 | cysteine--tRNA ligase | - |
| SANT_RS15075 () | 3375297..3375791 | + | 495 | WP_025423104.1 | peptidylprolyl isomerase B | - |
| SANT_RS15080 () | 3375802..3376521 | + | 720 | WP_025423105.1 | UDP-2,3-diacylglucosamine diphosphatase | - |
| SANT_RS15085 () | 3376660..3377082 | - | 423 | WP_025423106.1 | ASCH domain-containing protein | - |
| SANT_RS15090 () | 3377316..3377825 | + | 510 | WP_025423107.1 | 5-(carboxyamino)imidazole ribonucleotide mutase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|