MGE detailed information
MGE type: Conjugative plasmid MGE length: 98066 bp
Accession: NZ_CP006263 Location: 1..98066 Organism: Escherichia coli O145:H28 str. RM13516 Replicon: plasmid pO145-13516
Accession: NZ_CP006263 Location: 1..98066 Organism: Escherichia coli O145:H28 str. RM13516 Replicon: plasmid pO145-13516
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECRM13516_RS27450 () | 41..2701 | + | 2661 | WP_000770131.1 | Metalloprotease StcE | VF |
| ECRM13516_RS27455 () | 2785..3660 | + | 876 | WP_001368871.1 | Type II secretion system protein C | VF |
| ECRM13516_RS27460 () | 3661..5631 | + | 1971 | WP_013009342.1 | Type II secretion system protein D | VF |
| ECRM13516_RS27465 () | 5628..7130 | + | 1503 | WP_001418198.1 | Type II secretion system protein E | VF |
| ECRM13516_RS27470 () | 7132..8355 | + | 1224 | WP_001173149.1 | Type II secretion system protein F | VF |
| ECRM13516_RS27475 () | 8386..8820 | + | 435 | WP_001231213.1 | Type II secretion system protein G | VF |
| ECRM13516_RS27480 () | 8817..9368 | + | 552 | WP_000082928.1 | type II secretion system minor pseudopilin GspH | - |
| ECRM13516_RS27485 () | 9383..9730 | + | 348 | WP_001420206.1 | Type II secretion system protein I | VF |
| ECRM13516_RS27490 () | 9727..10326 | + | 600 | WP_000082784.1 | Type II secretion system protein J | VF |
| ECRM13516_RS27495 () | 10323..11300 | + | 978 | WP_000842183.1 | Putative type II secretion system protein K | VF |
| ECRM13516_RS27500 () | 11339..12511 | + | 1173 | WP_071526091.1 | Type II secretion system protein L | VF |
| ECRM13516_RS27505 () | 12498..13010 | + | 513 | WP_025380709.1 | Type II secretion system protein M | VF |
| ECRM13516_RS27520 () | 13031..14244 | + | 1214 | WP_085947772.1 | IS3 family transposase ISCfr6 | Transposase |
| ECRM13516_RS27525 () | 14326..15159 | + | 834 | WP_025380710.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| ECRM13516_RS27530 () | 15253..15654 | + | 402 | WP_001222320.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| ECRM13516_RS31860 () | 15729..15944 | + | 216 | Protein_15 | IS3 family transposase IS1203 | Transposase |
| ECRM13516_RS32870 () | 16243..16536 | + | 294 | Protein_16 | hypothetical protein | - |
| ECRM13516_RS27545 () | 16765..17013 | + | 249 | WP_000083841.1 | replication regulatory protein RepA | - |
| ECRM13516_RS33035 () | 17036..17143 | + | 108 | Protein_18 | incFII family plasmid replication initiator RepA | - |
| ECRM13516_RS27555 () | 18099..18349 | + | 251 | Protein_19 | antitoxin | - |
| ECRM13516_RS27560 () | 18346..18633 | + | 288 | WP_000222761.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| ECRM13516_RS27565 () | 18737..19327 | + | 591 | WP_000594717.1 | Serine acetyltransferase | VF |
| ECRM13516_RS28540 () | 19431..20047 | + | 617 | Protein_22 | hypothetical protein | - |
| ECRM13516_RS27575 () | 20072..20365 | + | 294 | WP_000633741.1 | hypothetical protein | - |
| ECRM13516_RS27580 () | 20574..20705 | - | 132 | WP_106898824.1 | Serine protease EspP | VF |
| ECRM13516_RS27585 () | 20914..21523 | + | 610 | Protein_25 | Tn3 family transposase TnpR_ISMpo10 | Transposase |
| ECRM13516_RS27590 () | 21504..22190 | + | 687 | Protein_26 | Tn3 family transposase TnpA_ISPa40 | Transposase |
| ECRM13516_RS27595 () | 22349..22645 | + | 297 | WP_000766060.1 | hypothetical protein | - |
| ECRM13516_RS27600 () | 22645..23832 | + | 1188 | WP_025380712.1 | IS91 family transposase ISEc37 | Transposase |
| ECRM13516_RS30880 () | 24021..24173 | - | 153 | Protein_29 | IS3 family transposase IS1203 | Transposase |
| ECRM13516_RS27610 () | 25161..25382 | + | 222 | WP_000907893.1 | hypothetical protein | - |
| ECRM13516_RS27615 () | 25649..26470 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| ECRM13516_RS27620 () | 26470..27576 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| ECRM13516_RS27625 () | 27670..29391 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| ECRM13516_RS27630 () | 29465..30463 | + | 999 | WP_077629919.1 | Lipid A biosynthesis myristoyltransferase | VF |
| ECRM13516_RS32700 () | 30516..30704 | + | 189 | Protein_35 | hypothetical protein | - |
| ECRM13516_RS27640 () | 30767..32305 | - | 1539 | WP_025380713.1 | IS66 family transposase ISEc8 | Transposase |
| ECRM13516_RS27645 () | 32355..32702 | - | 348 | WP_000612632.1 | IS66 family transposase ISEc8 | Transposase |
| ECRM13516_RS27650 () | 32699..33079 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| ECRM13516_RS27655 () | 33242..33667 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| ECRM13516_RS27660 () | 33664..34014 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| ECRM13516_RS27665 () | 34045..35658 | + | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| ECRM13516_RS27670 () | 35769..36329 | - | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| ECRM13516_RS27675 () | 36432..37292 | - | 861 | WP_000704529.1 | putative protein YcjY | VF |
| ECRM13516_RS27680 () | 37351..38097 | - | 747 | WP_000205715.1 | conjugal transfer pilus acetylase TraX | - |
| ECRM13516_RS27685 () | 38117..43387 | - | 5271 | WP_025380714.1 | Multifunctional conjugation protein TraI | Relaxase |
| ECRM13516_RS27690 () | 43387..45540 | - | 2154 | WP_001369365.1 | type IV conjugative transfer system coupling protein TraD | - |
| ECRM13516_RS27695 () | 45792..46523 | - | 732 | WP_000782454.1 | complement resistance protein TraT | - |
| ECRM13516_RS27700 () | 46572..47057 | - | 486 | WP_000605868.1 | hypothetical protein | - |
| ECRM13516_RS27705 () | 47073..49634 | - | 2562 | Protein_49 | conjugal transfer mating pair stabilization protein TraG | - |
| ECRM13516_RS27715 () | 49684..50897 | + | 1214 | WP_136952279.1 | IS3 family transposase IS629 | Transposase |
| ECRM13516_RS33040 () | 50944..51213 | - | 270 | Protein_51 | hypothetical protein | - |
| ECRM13516_RS30905 () | 51206..51427 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| ECRM13516_RS27725 () | 51562..52077 | - | 516 | WP_021532964.1 | type IV conjugative transfer system lipoprotein TraV | - |
| ECRM13516_RS27730 () | 52074..52325 | - | 252 | WP_001038348.1 | conjugal transfer protein TrbG | - |
| ECRM13516_RS27735 () | 52318..52671 | - | 354 | WP_071826576.1 | DUF2689 domain-containing protein | - |
| ECRM13516_RS27740 () | 52625..53212 | - | 588 | WP_025380716.1 | conjugal transfer protein TraP | - |
| ECRM13516_RS27745 () | 53202..54629 | - | 1428 | WP_025380717.1 | conjugal transfer protein TraB | - |
| ECRM13516_RS27750 () | 54629..55333 | - | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| ECRM13516_RS27755 () | 55344..55910 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| ECRM13516_RS27760 () | 55932..56243 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| ECRM13516_RS27765 () | 56258..56617 | - | 360 | WP_000340272.1 | type IV conjugative transfer system pilin TraA | - |
| ECRM13516_RS27770 () | 56651..56878 | - | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| ECRM13516_RS27775 () | 56973..57659 | - | 687 | WP_025380718.1 | PAS domain-containing protein | - |
| ECRM13516_RS27780 () | 57850..58233 | - | 384 | WP_000124981.1 | relaxosome protein TraM | - |
| ECRM13516_RS27785 () | 58510..59157 | + | 648 | WP_122994606.1 | hypothetical protein | VF |
| ECRM13516_RS27790 () | 59454..60275 | - | 822 | WP_001234426.1 | DUF945 domain-containing protein | - |
| ECRM13516_RS27795 () | 60393..60680 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| ECRM13516_RS27810 () | 61602..61760 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 61804..62028 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 61804..62028 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 61804..62028 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 61804..62028 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| ECRM13516_RS32825 () | 61840..62028 | + | 189 | WP_001299721.1 | hypothetical protein | - |
| ECRM13516_RS27820 () | 62040..62759 | - | 720 | WP_001276238.1 | plasmid SOS inhibition protein A | - |
| ECRM13516_RS27825 () | 62756..63190 | - | 435 | WP_025380720.1 | conjugation system SOS inhibitor PsiB | - |
| ECRM13516_RS30915 () | 63245..63442 | - | 198 | Protein_72 | hypothetical protein | - |
| ECRM13516_RS27830 () | 63470..63703 | - | 234 | WP_025380721.1 | DUF905 family protein | - |
| ECRM13516_RS27835 () | 63766..64305 | - | 540 | WP_025380722.1 | single-stranded DNA-binding protein | - |
| ECRM13516_RS33045 () | 64331..64537 | - | 207 | WP_000547944.1 | hypothetical protein | - |
| ECRM13516_RS27845 () | 65146..65337 | - | 192 | WP_001027500.1 | hypothetical protein | - |
| ECRM13516_RS27850 () | 65334..65798 | - | 465 | WP_044697612.1 | DUF1380 family protein | - |
| ECRM13516_RS27855 () | 65798..66100 | - | 303 | WP_072128865.1 | antirestriction protein | - |
| ECRM13516_RS33050 () | 66641..66958 | - | 318 | Protein_79 | hypothetical protein | - |
| ECRM13516_RS33055 () | 66951..67037 | - | 87 | Protein_80 | adenine-specific DNA-methyltransferase | - |
| ECRM13516_RS31880 () | 67114..67419 | - | 306 | WP_033810170.1 | hypothetical protein | - |
| ECRM13516_RS32830 () | 67423..67839 | - | 417 | Protein_82 | DUF1281 domain-containing protein | - |
| ECRM13516_RS27875 () | 67720..68533 | + | 814 | Protein_83 | hypothetical protein | - |
| ECRM13516_RS27880 () | 68601..68966 | + | 366 | WP_000091308.1 | hypothetical protein | - |
| ECRM13516_RS27885 () | 68966..70153 | + | 1188 | WP_025380712.1 | IS91 family transposase ISEc37 | Transposase |
| ECRM13516_RS27890 () | 70366..70545 | - | 180 | WP_000526859.1 | hypothetical protein | VF |
| ECRM13516_RS27895 () | 70748..71122 | + | 375 | WP_001368887.1 | hypothetical protein | - |
| ECRM13516_RS32725 () | 71433..71594 | - | 162 | Protein_88 | epoxyqueuosine reductase QueH | - |
| ECRM13516_RS28670 () | 71645..71785 | + | 141 | Protein_89 | serine/threonine protein kinase | - |
| ECRM13516_RS27905 () | 71909..72649 | + | 741 | WP_001066926.1 | IS91 family transposase ISMno23 | Transposase |
| ECRM13516_RS27920 () | 74194..75171 | - | 978 | WP_000361617.1 | RepB family plasmid replication initiator protein | - |
| ECRM13516_RS32730 () | 75817..76105 | - | 289 | Protein_93 | integrase core domain-containing protein | - |
| ECRM13516_RS27930 () | 76290..77477 | - | 1188 | WP_025380712.1 | IS91 family transposase ISEc37 | Transposase |
| ECRM13516_RS27935 () | 77477..77842 | - | 366 | WP_000091308.1 | hypothetical protein | - |
| ECRM13516_RS33060 () | 77928..78050 | - | 123 | Protein_96 | IS3 family transposase | - |
| ECRM13516_RS27940 () | 78052..78339 | - | 288 | WP_001270421.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| ECRM13516_RS27945 () | 78336..78587 | - | 252 | WP_001132893.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| ECRM13516_RS32835 () | 78761..79078 | - | 318 | WP_157910106.1 | hypothetical protein | - |
| ECRM13516_RS27955 () | 79305..80510 | + | 1206 | WP_000817642.1 | Plasmid partition protein A | VF |
| ECRM13516_RS27960 () | 80507..81469 | + | 963 | WP_000756329.1 | ParB/RepB/Spo0J family partition protein | - |
| ECRM13516_RS30975 () | 81609..81977 | - | 369 | Protein_102 | DUF4113 domain-containing protein | - |
| ECRM13516_RS27970 () | 82165..83352 | - | 1188 | WP_025380712.1 | IS91 family transposase ISEc37 | Transposase |
| ECRM13516_RS27975 () | 83352..83717 | - | 366 | WP_000091308.1 | hypothetical protein | - |
| ECRM13516_RS27985 () | 83808..84304 | + | 497 | Protein_105 | IS3 family transposase IS629 | Transposase |
| ECRM13516_RS27990 () | 84827..85342 | + | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| ECRM13516_RS27995 () | 85344..88340 | + | 2997 | WP_000217745.1 | Hemolysin, chromosomal | VF |
| ECRM13516_RS28000 () | 88390..90510 | + | 2121 | WP_000987096.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| ECRM13516_RS28005 () | 90514..91953 | + | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| ECRM13516_RS32740 () | 92020..92187 | + | 168 | Protein_110 | hypothetical protein | - |
| ECRM13516_RS28010 () | 92201..92854 | - | 654 | Protein_111 | IS3 family transposase ISEc48 | Transposase |
| ECRM13516_RS28015 () | 92893..94431 | - | 1539 | WP_025380726.1 | IS66 family transposase ISEc8 | Transposase |
| ECRM13516_RS28020 () | 94481..94828 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| ECRM13516_RS28025 () | 94825..95205 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| ECRM13516_RS28030 () | 95366..95578 | + | 213 | WP_032257629.1 | ANR family transcriptional regulator | - |
| ECRM13516_RS28035 () | 95824..96218 | + | 395 | Protein_116 | thermonuclease family protein | - |
| ECRM13516_RS32745 () | 96581..96724 | - | 144 | Protein_117 | IS3 family transposase | - |
| ECRM13516_RS28040 () | 96727..96870 | - | 144 | Protein_118 | IS3 family transposase IS911 | Transposase |
| ECRM13516_RS30995 () | 96947..97620 | + | 674 | Protein_119 | DDE-type integrase/transposase/recombinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|