MGE detailed information
MGE type: Prophage MGE length: 74886 bp
Accession: NZ_CP006027 Location: 1731333..1806218 Organism: Escherichia coli O145:H28 str. RM13514 Replicon: chromosome
Accession: NZ_CP006027 Location: 1731333..1806218 Organism: Escherichia coli O145:H28 str. RM13514 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECRM13514_RS08800 () | 1726839..1728365 | - | 1527 | WP_000062967.1 | p-aminobenzoyl-glutamate transporter | - |
| ECRM13514_RS08810 () | 1728402..1729847 | - | 1446 | WP_001156458.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgB | - |
| ECRM13514_RS08815 () | 1729847..1731157 | - | 1311 | WP_000444926.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgA | - |
| ECRM13514_RS08820 () | 1731333..1732241 | + | 909 | WP_000885455.1 | LysR family transcriptional regulator | - |
| ECRM13514_RS08830 () | 1732571..1733134 | + | 564 | WP_001046829.1 | DNA endonuclease SmrA | - |
| ECRM13514_RS08835 () | 1733155..1734387 | - | 1233 | WP_001401302.1 | hypothetical protein | VF |
| ECRM13514_RS08840 () | 1734642..1735625 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| ECRM13514_RS08850 () | 1736103..1737476 | + | 1374 | WP_000123735.1 | ATP-dependent RNA helicase DbpA | - |
| ECRM13514_RS08855 () | 1737605..1738540 | - | 936 | WP_001157377.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| ECRM13514_RS30690 () | 1738593..1739828 | - | 1236 | WP_000040838.1 | hypothetical protein ; Integrase | Integrase |
| ECRM13514_RS08865 () | 1739830..1740045 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| ECRM13514_RS08870 () | 1740145..1740333 | - | 189 | WP_001298826.1 | DUF1187 family protein | - |
| - () | 1740149..1740327 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1740149..1740327 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1740149..1740327 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1740149..1740327 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| ECRM13514_RS08875 () | 1740326..1740520 | - | 195 | WP_021500490.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| ECRM13514_RS08880 () | 1740584..1741636 | - | 1053 | WP_001004423.1 | recombinase RecT | - |
| ECRM13514_RS08885 () | 1741648..1744773 | - | 3126 | WP_025404324.1 | exodeoxyribonuclease VIII | - |
| ECRM13514_RS08890 () | 1744875..1745150 | - | 276 | WP_001519830.1 | phage protein | - |
| ECRM13514_RS08895 () | 1745225..1745401 | - | 177 | WP_000245528.1 | hypothetical protein | - |
| ECRM13514_RS08900 () | 1745395..1745616 | - | 222 | WP_000560227.1 | cell division protein FtsZ | - |
| ECRM13514_RS30695 () | 1746212..1746394 | + | 183 | WP_032102321.1 | hypothetical protein | - |
| ECRM13514_RS08910 () | 1746395..1747033 | - | 639 | WP_025404325.1 | hypothetical protein | - |
| ECRM13514_RS08915 () | 1747045..1747197 | - | 153 | WP_000379546.1 | DUF1391 family protein | - |
| ECRM13514_RS08920 () | 1747503..1747922 | - | 420 | WP_000410105.1 | helix-turn-helix domain-containing protein | - |
| ECRM13514_RS08925 () | 1748019..1748261 | + | 243 | WP_001033914.1 | helix-turn-helix domain-containing protein | - |
| ECRM13514_RS08930 () | 1748258..1748680 | + | 423 | WP_000702023.1 | hypothetical protein | - |
| ECRM13514_RS08935 () | 1748693..1749562 | + | 870 | WP_000899742.1 | DUF1376 domain-containing protein | - |
| ECRM13514_RS08940 () | 1749569..1750315 | + | 747 | WP_025404326.1 | ATP-binding protein | - |
| ECRM13514_RS08945 () | 1750337..1751107 | + | 771 | WP_025404327.1 | DUF1627 domain-containing protein | - |
| ECRM13514_RS08950 () | 1751123..1751518 | + | 396 | WP_001118155.1 | DUF977 family protein | - |
| ECRM13514_RS08955 () | 1751576..1751932 | + | 357 | WP_000403779.1 | hypothetical protein | - |
| ECRM13514_RS08960 () | 1751981..1752193 | + | 213 | WP_000063625.1 | hypothetical protein | - |
| ECRM13514_RS08965 () | 1752257..1752601 | + | 345 | WP_029594466.1 | hypothetical protein | - |
| ECRM13514_RS08970 () | 1752598..1752951 | + | 354 | WP_000610382.1 | DUF551 domain-containing protein | - |
| ECRM13514_RS32740 () | 1753067..1753171 | + | 105 | WP_001278450.1 | hypothetical protein | - |
| ECRM13514_RS08980 () | 1753417..1753572 | + | 156 | WP_000813258.1 | type I toxin-antitoxin system Hok family toxin | - |
| ECRM13514_RS08985 () | 1754132..1754731 | + | 600 | WP_000940348.1 | DUF1367 family protein | - |
| ECRM13514_RS08990 () | 1754731..1755021 | + | 291 | WP_000228019.1 | DUF1364 domain-containing protein | - |
| ECRM13514_RS08995 () | 1755018..1755572 | + | 555 | WP_000640148.1 | DUF1133 family protein | - |
| ECRM13514_RS09000 () | 1755846..1756427 | + | 582 | WP_000211416.1 | ORF6N domain-containing protein | - |
| ECRM13514_RS34355 () | 1756671..1756868 | + | 198 | WP_000917763.1 | hypothetical protein | - |
| ECRM13514_RS09010 () | 1757003..1757716 | + | 714 | WP_000301789.1 | helix-turn-helix domain-containing protein | - |
| ECRM13514_RS09025 () | 1758167..1758598 | + | 432 | WP_000466957.1 | tellurite resistance TerB family protein | - |
| ECRM13514_RS09030 () | 1758595..1758850 | + | 256 | Protein_1693 | DUF3927 family protein | - |
| ECRM13514_RS09035 () | 1759170..1761020 | + | 1851 | WP_024247920.1 | SASA family carbohydrate esterase | - |
| ECRM13514_RS09040 () | 1761456..1761671 | + | 216 | WP_113706112.1 | class II holin family protein | - |
| ECRM13514_RS09045 () | 1761676..1762020 | + | 345 | WP_000731241.1 | YdfR family protein | - |
| ECRM13514_RS09050 () | 1762071..1762604 | + | 534 | WP_000992148.1 | lysozyme | - |
| ECRM13514_RS09055 () | 1762875..1763444 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| ECRM13514_RS34360 () | 1763444..1763590 | + | 147 | WP_000539795.1 | hypothetical protein | - |
| ECRM13514_RS34365 () | 1763813..1763998 | + | 186 | WP_001208680.1 | Rz1 family lipoprotein | - |
| ECRM13514_RS09070 () | 1764524..1764838 | + | 315 | WP_001302717.1 | PerC family transcriptional regulator | - |
| ECRM13514_RS09075 () | 1764920..1765144 | - | 225 | WP_001303940.1 | YlcI/YnfO family protein | - |
| ECRM13514_RS09085 () | 1765533..1766078 | + | 546 | WP_000453587.1 | DNA-packaging protein | - |
| ECRM13514_RS09090 () | 1766053..1767978 | + | 1926 | WP_001027330.1 | phage terminase large subunit family protein | - |
| ECRM13514_RS09095 () | 1767975..1768181 | + | 207 | WP_000198153.1 | gpW family protein | - |
| ECRM13514_RS09100 () | 1768178..1769779 | + | 1602 | WP_001443752.1 | phage portal protein | - |
| ECRM13514_RS09105 () | 1769760..1771079 | + | 1320 | WP_025404328.1 | S49 family peptidase | - |
| ECRM13514_RS09110 () | 1771089..1771421 | + | 333 | WP_001295978.1 | head decoration protein | - |
| ECRM13514_RS09115 () | 1771477..1772502 | + | 1026 | WP_000063258.1 | major capsid protein | - |
| ECRM13514_RS09120 () | 1772544..1772939 | + | 396 | WP_000158897.1 | DNA-packaging protein FI | - |
| ECRM13514_RS09125 () | 1772951..1773304 | + | 354 | WP_000752994.1 | head-tail joining protein | - |
| ECRM13514_RS09130 () | 1773316..1773894 | + | 579 | WP_000975099.1 | phage tail protein | - |
| ECRM13514_RS09135 () | 1773891..1774286 | + | 396 | WP_000683138.1 | phage minor tail U family protein | - |
| ECRM13514_RS09140 () | 1774294..1775034 | + | 741 | WP_001342267.1 | phage tail protein | - |
| ECRM13514_RS09145 () | 1775050..1775472 | + | 423 | WP_000479169.1 | phage minor tail protein G | - |
| ECRM13514_RS09150 () | 1775454..1775888 | + | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| ECRM13514_RS09155 () | 1775881..1778460 | + | 2580 | WP_025404251.1 | phage tail tape measure protein | - |
| ECRM13514_RS09160 () | 1778457..1778786 | + | 330 | WP_000847347.1 | phage tail protein | - |
| ECRM13514_RS09165 () | 1778786..1779484 | + | 699 | WP_001152619.1 | phage minor tail protein L | - |
| ECRM13514_RS09170 () | 1779490..1780233 | + | 744 | WP_000194780.1 | C40 family peptidase | - |
| ECRM13514_RS09175 () | 1780170..1780802 | + | 633 | WP_000090891.1 | tail assembly protein | - |
| ECRM13514_RS32755 () | 1780863..1784359 | + | 3497 | Protein_1722 | host specificity protein J | - |
| ECRM13514_RS09185 () | 1784430..1785029 | + | 600 | WP_001585354.1 | hypothetical protein | VF |
| ECRM13514_RS09190 () | 1785094..1786407 | + | 1314 | WP_025404329.1 | ISNCY family transposase KIS | Transposase |
| ECRM13514_RS09195 () | 1786409..1786678 | + | 270 | WP_001023407.1 | phage tail fiber C-terminal domain-containing protein | - |
| ECRM13514_RS09200 () | 1787046..1787288 | - | 243 | WP_001120551.1 | DinI-like family protein | - |
| ECRM13514_RS30770 () | 1787420..1787710 | + | 291 | Protein_1727 | MFS transporter | - |
| ECRM13514_RS09215 () | 1789030..1790016 | + | 987 | Protein_1729 | MHS family MFS transporter YdfJ | - |
| ECRM13514_RS09220 () | 1790106..1791566 | + | 1461 | WP_000527802.1 | mannitol dehydrogenase family protein | - |
| ECRM13514_RS09225 () | 1791602..1791805 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| ECRM13514_RS09230 () | 1791982..1792668 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| ECRM13514_RS09235 () | 1792757..1793503 | - | 747 | WP_000636575.1 | hypothetical protein | VF |
| ECRM13514_RS09240 () | 1793640..1795685 | + | 2046 | WP_001401055.1 | peptidyl-dipeptidase Dcp | - |
| ECRM13514_RS09245 () | 1795730..1796248 | - | 519 | WP_001024796.1 | 2-oxo-tetronate isomerase | - |
| ECRM13514_RS33610 () | 1796524..1796915 | + | 392 | Protein_1736 | YdeI family stress tolerance OB fold protein | - |
| ECRM13514_RS09255 () | 1797170..1798060 | + | 891 | WP_000592812.1 | diguanylate cyclase DgcZ | - |
| ECRM13514_RS09260 () | 1798279..1798374 | - | 96 | WP_000901367.1 | protein MgtS | - |
| ECRM13514_RS09265 () | 1798501..1799688 | - | 1188 | WP_001054153.1 | efflux MFS transporter YdeE | - |
| ECRM13514_RS09270 () | 1799883..1800782 | + | 900 | WP_000087230.1 | O-acetylserine/cysteine exporter | - |
| ECRM13514_RS09275 () | 1800813..1801031 | - | 219 | WP_000803520.1 | multiple antibiotic resistance protein MarB | - |
| ECRM13514_RS09280 () | 1801063..1801446 | - | 384 | WP_000091199.1 | hypothetical protein | VF |
| ECRM13514_RS09285 () | 1801467..1801901 | - | 435 | WP_000843419.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| ECRM13514_RS09290 () | 1802113..1802778 | + | 666 | WP_000885033.1 | NAAT family transporter MarC | - |
| ECRM13514_RS09295 () | 1802803..1803993 | - | 1191 | WP_000210799.1 | L-arabinose MFS transporter | - |
| ECRM13514_RS09300 () | 1804144..1805259 | - | 1116 | WP_000258596.1 | putative protein YneK | - |
| ECRM13514_RS09305 () | 1805337..1806218 | - | 882 | WP_000366471.1 | hypothetical protein | VF |
| ECRM13514_RS09310 () | 1806319..1807707 | + | 1389 | WP_001401047.1 | succinate-semialdehyde dehydrogenase | - |
| ECRM13514_RS09315 () | 1807771..1808697 | + | 927 | WP_000257409.1 | glutaminase B | - |
| ECRM13514_RS09320 () | 1808697..1809056 | + | 360 | WP_001191016.1 | DUF4186 domain-containing protein | - |
| ECRM13514_RS09325 () | 1809195..1810613 | + | 1419 | WP_000558062.1 | GGDEF domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|