MGE detailed information
MGE type: Genomic_island MGE length: 20682 bp
Accession: NZ_CP005930 Location: 3180568..3201249 Organism: Escherichia coli APEC IMT5155 Replicon: chromosome
Accession: NZ_CP005930 Location: 3180568..3201249 Organism: Escherichia coli APEC IMT5155 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L282_RS15665 () | 3176682..3177107 | - | 426 | WP_000946068.1 | type VI secretion system baseplate subunit TssE | - |
| L282_RS15670 () | 3177112..3178597 | - | 1486 | Protein_2941 | type VI secretion system contractile sheath large subunit | - |
| L282_RS15675 () | 3178620..3179123 | - | 504 | WP_000041480.1 | type VI secretion system contractile sheath small subunit | - |
| L282_RS15680 () | 3179829..3180347 | + | 519 | WP_001142963.1 | Hcp family type VI secretion system effector | - |
| L282_RS15690 () | 3180568..3182550 | + | 1983 | WP_000053636.1 | hypothetical protein | VF |
| L282_RS15695 () | 3182657..3183703 | + | 1047 | WP_000571853.1 | DUF2169 domain-containing protein | - |
| L282_RS15700 () | 3183696..3185135 | + | 1440 | WP_000528852.1 | DUF4150 domain-containing protein | - |
| L282_RS15705 () | 3185110..3185400 | + | 291 | WP_000513317.1 | hypothetical protein | - |
| L282_RS28340 () | 3185658..3186422 | + | 765 | Protein_2948 | ISAs1 family transposase ISEc1 | Transposase |
| L282_RS15720 () | 3186651..3187154 | + | 504 | WP_000227712.1 | hypothetical protein | - |
| L282_RS15725 () | 3187248..3187736 | + | 489 | WP_001298174.1 | integrating conjugative element protein | - |
| L282_RS28985 () | 3187762..3187956 | + | 195 | Protein_2951 | transposase | - |
| L282_RS15730 () | 3188007..3188777 | - | 771 | WP_001118042.1 | 2-oxoglutaramate amidase | - |
| L282_RS15735 () | 3188958..3189404 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| L282_RS15740 () | 3189447..3191891 | - | 2445 | WP_000973137.1 | hypothetical protein | VF |
| L282_RS15745 () | 3192131..3192709 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| L282_RS15750 () | 3192914..3193681 | + | 768 | WP_001331866.1 | class II glutamine amidotransferase | - |
| L282_RS15755 () | 3193652..3194392 | - | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| L282_RS15760 () | 3194704..3195453 | + | 750 | WP_000093934.1 | hypothetical protein | VF |
| L282_RS15765 () | 3195629..3196126 | + | 498 | WP_039267782.1 | REP-associated tyrosine transposase RayT | - |
| L282_RS29370 () | 3196209..3196367 | - | 159 | WP_014639450.1 | hypothetical protein | - |
| L282_RS15770 () | 3196446..3198158 | - | 1713 | Protein_2961 | hypothetical protein | VF |
| L282_RS15775 () | 3198130..3198915 | + | 786 | WP_000207544.1 | hypothetical protein | VF |
| L282_RS15780 () | 3198986..3200041 | + | 1056 | WP_001226168.1 | DNA polymerase IV | - |
| L282_RS15785 () | 3200093..3200386 | + | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| L282_RS15790 () | 3200389..3200787 | + | 399 | WP_001263500.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| L282_RS15795 () | 3200797..3201249 | + | 453 | WP_001059895.1 | GNAT family N-acetyltransferase | - |
| L282_RS15800 () | 3201439..3202578 | + | 1140 | WP_039267783.1 | RNA ligase RtcB family protein | - |
| L282_RS15805 () | 3202575..3203189 | + | 615 | WP_000602123.1 | peptide chain release factor H | - |
| L282_RS15810 () | 3203246..3204703 | - | 1458 | WP_001292999.1 | cytosol nonspecific dipeptidase | - |
| L282_RS15815 () | 3204964..3205422 | + | 459 | WP_001291988.1 | xanthine phosphoribosyltransferase | - |
| - () | 3206018..3206098 | + | 81 | NuclAT_4 | - | - |
| - () | 3206018..3206098 | + | 81 | NuclAT_4 | - | - |
| - () | 3206018..3206098 | + | 81 | NuclAT_4 | - | - |
| - () | 3206018..3206098 | + | 81 | NuclAT_4 | - | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|