MGE detailed information
MGE type: Conjugative plasmid MGE length: 88374 bp
Accession: NZ_CP005192 Location: 1..88374 Organism: Sphingobium sp. MI1205 Replicon: plasmid pMI3
Accession: NZ_CP005192 Location: 1..88374 Organism: Sphingobium sp. MI1205 Replicon: plasmid pMI3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K663_RS22265 () | 1..783 | + | 783 | WP_011627721.1 | hypothetical protein | - |
| K663_RS22270 () | 895..1776 | + | 882 | WP_011627722.1 | toprim domain-containing protein | - |
| K663_RS22275 () | 1770..2360 | + | 591 | WP_062121861.1 | thermonuclease family protein | - |
| K663_RS22280 () | 2477..2797 | + | 321 | WP_062121864.1 | hypothetical protein | - |
| K663_RS22285 () | 3079..4854 | + | 1776 | WP_011627724.1 | ParB/RepB/Spo0J family partition protein | - |
| K663_RS22290 () | 5293..6165 | + | 873 | WP_011627725.1 | DUF1738 domain-containing protein | - |
| K663_RS22295 () | 6313..6573 | + | 261 | WP_062121867.1 | hypothetical protein | - |
| K663_RS22300 () | 6577..7857 | + | 1281 | WP_011627726.1 | Fic family protein | - |
| K663_RS22305 () | 8186..8575 | + | 390 | WP_008831643.1 | DUF3768 domain-containing protein | - |
| K663_RS22310 () | 8589..8798 | + | 210 | WP_062121870.1 | hypothetical protein | - |
| K663_RS22315 () | 8795..9326 | + | 532 | Protein_10 | hypothetical protein | - |
| K663_RS22320 () | 9447..9788 | + | 342 | WP_062121872.1 | hypothetical protein | - |
| K663_RS22325 () | 10065..12956 | - | 2892 | WP_011627727.1 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| K663_RS23670 () | 13082..13189 | + | 108 | Protein_13 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| K663_RS22330 () | 13250..14014 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| K663_RS22335 () | 14056..15426 | + | 1371 | WP_007682392.1 | TonB-dependent receptor | - |
| K663_RS22340 () | 15466..16218 | + | 753 | WP_015460611.1 | 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase | VF |
| K663_RS22345 () | 16240..16926 | + | 687 | WP_007682394.1 | EthD domain-containing protein | - |
| K663_RS22350 () | 16926..17288 | + | 363 | WP_007682395.1 | hypothetical protein | - |
| K663_RS22355 () | 17386..18150 | - | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| K663_RS22360 () | 18214..18582 | + | 369 | Protein_20 | Maleylacetate reductase | VF |
| K663_RS22365 () | 18694..19452 | - | 759 | WP_007687861.1 | esterase | - |
| K663_RS22375 () | 20277..20570 | + | 294 | Protein_22 | glutathione S-transferase N-terminal domain-containing protein | - |
| K663_RS22380 () | 20626..21390 | - | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| K663_RS22385 () | 21356..22290 | - | 935 | Protein_24 | Pesticin receptor | VF |
| K663_RS22395 () | 22546..23220 | + | 675 | WP_062121711.1 | TetR/AcrR family transcriptional regulator | - |
| K663_RS22400 () | 23380..23949 | - | 570 | WP_062121710.1 | hypothetical protein | - |
| K663_RS22405 () | 24050..25027 | - | 978 | WP_007685991.1 | ExeA family protein | - |
| K663_RS22410 () | 25027..26679 | - | 1653 | WP_007685992.1 | IS481 family transposase ISAzs36 | Transposase |
| K663_RS22415 () | 26672..27268 | - | 597 | WP_007685993.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| K663_RS22420 () | 27434..28126 | + | 693 | WP_007685994.1 | hypothetical protein | - |
| K663_RS22425 () | 28155..28607 | + | 453 | WP_007685995.1 | hypothetical protein | - |
| K663_RS22430 () | 29096..29731 | + | 636 | WP_015460616.1 | Chromosome-partitioning ATPase Soj | VF |
| K663_RS22435 () | 29757..30038 | + | 282 | WP_015460617.1 | hypothetical protein | - |
| K663_RS22440 () | 30095..31006 | - | 912 | WP_015460618.1 | replication initiation protein | - |
| K663_RS24160 () | 31964..32346 | - | 383 | Protein_35 | type IV secretory system conjugative DNA transfer family protein | - |
| K663_RS23685 () | 32407..32959 | - | 553 | Protein_36 | AAA family ATPase | - |
| K663_RS22455 () | 32952..33176 | - | 225 | WP_015460621.1 | conjugal transfer protein TraD | - |
| K663_RS22460 () | 33214..33519 | - | 306 | WP_015460622.1 | conjugal transfer protein TraD | - |
| K663_RS22465 () | 33692..36826 | + | 3135 | WP_015460623.1 | Mobilization protein A | Relaxase |
| K663_RS22470 () | 36834..37556 | + | 723 | WP_015460630.1 | hypothetical protein | - |
| K663_RS22475 () | 37966..38730 | - | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| K663_RS22480 () | 38759..39013 | + | 255 | WP_007682112.1 | hypothetical protein | - |
| K663_RS22485 () | 39099..39989 | + | 891 | WP_007682110.1 | haloalkane dehalogenase | - |
| K663_RS22490 () | 40149..40913 | - | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| K663_RS22495 () | 40942..41196 | + | 255 | WP_007682112.1 | hypothetical protein | - |
| K663_RS22500 () | 41282..42172 | + | 891 | WP_007682110.1 | haloalkane dehalogenase | - |
| K663_RS22505 () | 42332..43096 | - | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| K663_RS22510 () | 43141..43701 | + | 561 | WP_029987071.1 | Tn3 family transposase TnpR_ISMpo10 | Transposase |
| K663_RS22515 () | 43733..44041 | + | 309 | WP_007682056.1 | BrnT family toxin | Toxin Detail |
| K663_RS22520 () | 44022..44354 | + | 333 | WP_007682049.1 | BrnA antitoxin family protein | Antitoxin Detail |
| K663_RS22525 () | 44816..45490 | - | 675 | WP_007682041.1 | IS5 family transposase ISMex40 | Transposase |
| K663_RS24505 () | 45673..45966 | + | 294 | WP_145907151.1 | IS110 family transposase ISMex9 | Transposase |
| K663_RS22530 () | 45911..46579 | - | 669 | WP_081440685.1 | EthD domain-containing protein | - |
| K663_RS22535 () | 46625..47386 | - | 762 | WP_007682039.1 | 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase | VF |
| K663_RS24175 () | 47433..47594 | - | 162 | WP_145902397.1 | hypothetical protein | - |
| K663_RS22540 () | 47651..50608 | - | 2958 | WP_011627729.1 | Tn3 family transposase TnpA_ISAzs17 | Transposase |
| K663_RS22545 () | 50748..51341 | + | 594 | WP_013039114.1 | Tn3 family transposase ISPsy42 | Transposase |
| K663_RS22550 () | 51366..52217 | - | 852 | Protein_58 | Rieske 2Fe-2S domain-containing protein | - |
| K663_RS22555 () | 52246..53010 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| K663_RS22560 () | 53035..53586 | + | 552 | WP_083536069.1 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| K663_RS22565 () | 53583..54113 | + | 531 | WP_007686150.1 | GNAT family N-acetyltransferase | - |
| K663_RS22570 () | 54131..54490 | + | 360 | WP_083536070.1 | S24 family peptidase | - |
| K663_RS22575 () | 54501..55763 | + | 1263 | WP_011627731.1 | Y-family DNA polymerase | - |
| K663_RS24510 () | 55781..55924 | - | 144 | WP_158511244.1 | hypothetical protein | - |
| K663_RS22580 () | 56125..58932 | - | 2808 | WP_011627732.1 | hypothetical protein | - |
| K663_RS22585 () | 58941..61874 | - | 2934 | WP_011627733.1 | DEAD/DEAH box helicase family protein | - |
| K663_RS23700 () | 61874..63925 | - | 2052 | WP_062121882.1 | site-specific DNA-methyltransferase | - |
| K663_RS22595 () | 63981..64313 | - | 333 | WP_062121885.1 | HigA family addiction module antidote protein | - |
| K663_RS22600 () | 64323..64613 | - | 291 | WP_011627736.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| K663_RS22605 () | 65115..65429 | + | 315 | Protein_70 | hypothetical protein | - |
| K663_RS22610 () | 65730..65951 | + | 222 | WP_004213291.1 | hypothetical protein | - |
| K663_RS22615 () | 66044..66253 | + | 210 | WP_201026721.1 | hypothetical protein | - |
| K663_RS22620 () | 66271..66450 | - | 180 | WP_062121890.1 | hypothetical protein | - |
| K663_RS23705 () | 66564..66821 | - | 258 | WP_011627737.1 | helix-turn-helix domain-containing protein | - |
| K663_RS22625 () | 66977..67711 | + | 735 | WP_062121893.1 | RNA polymerase subunit sigma | - |
| K663_RS22630 () | 67701..68399 | + | 699 | WP_011627738.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| K663_RS22635 () | 68793..69107 | + | 315 | WP_004213277.1 | single-stranded DNA-binding protein | - |
| K663_RS22640 () | 69216..69467 | + | 252 | WP_007016081.1 | hypothetical protein | VF |
| K663_RS22645 () | 69534..69824 | + | 291 | WP_062121896.1 | hypothetical protein | - |
| K663_RS22650 () | 69855..70613 | + | 759 | WP_011627740.1 | AAA family ATPase | - |
| K663_RS22655 () | 70610..71629 | + | 1020 | WP_011627741.1 | ParB/RepB/Spo0J family partition protein | - |
| K663_RS22660 () | 71820..72371 | + | 552 | WP_011627742.1 | hypothetical protein | Relaxase |
| K663_RS22665 () | 72358..73344 | + | 987 | Protein_83 | hypothetical protein | Relaxase |
| K663_RS24185 () | 73451..73897 | - | 447 | WP_158511245.1 | hypothetical protein | - |
| K663_RS22675 () | 73902..75110 | - | 1209 | WP_011627744.1 | hypothetical protein | - |
| K663_RS22680 () | 75100..77016 | - | 1917 | WP_011627745.1 | Protein VirD4 | VF |
| K663_RS22685 () | 76994..77986 | - | 993 | WP_011627746.1 | Type IV secretion system protein VirB11 | VF |
| K663_RS22690 () | 77983..79251 | - | 1269 | WP_062121904.1 | Type IV secretion system protein virB10 | VF |
| K663_RS22695 () | 79253..80095 | - | 843 | WP_011627748.1 | Type IV secretion system protein virB9 | VF |
| K663_RS22700 () | 80092..80775 | - | 684 | WP_004213217.1 | Type IV secretion system protein virB8 | VF |
| K663_RS22705 () | 80785..81105 | - | 321 | WP_021223057.1 | hypothetical protein | - |
| K663_RS22710 () | 81116..82132 | - | 1017 | WP_011627750.1 | type IV secretion system protein | - |
| K663_RS22715 () | 82173..82478 | - | 306 | WP_011627751.1 | hypothetical protein | - |
| K663_RS22720 () | 82481..83194 | - | 714 | WP_011627752.1 | VirB5 type IV secretion protein | - |
| K663_RS22725 () | 83208..85592 | - | 2385 | WP_011627753.1 | Type IV secretion system protein virB4 | VF |
| K663_RS22730 () | 85579..85923 | - | 345 | WP_006949650.1 | Type IV secretion system protein virB3 | VF |
| K663_RS22735 () | 85930..86271 | - | 342 | WP_004213202.1 | TrbC/VirB2 family protein | - |
| K663_RS22740 () | 86293..86958 | - | 666 | WP_011627754.1 | Type IV secretion system protein virB1 | VF |
| K663_RS22745 () | 86973..87314 | - | 342 | WP_083536072.1 | hypothetical protein | - |
| K663_RS22750 () | 87356..87664 | - | 309 | WP_004213195.1 | hypothetical protein | - |
| K663_RS24515 () | 87869..88072 | + | 204 | WP_020819814.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|