MGE detailed information
MGE type: IScluster/Tn MGE length: 16563 bp
Accession: NZ_CP005088 Location: 20658..37220 Organism: Sphingobium sp. TKS Replicon: plasmid pTK4
Accession: NZ_CP005088 Location: 20658..37220 Organism: Sphingobium sp. TKS Replicon: plasmid pTK4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K426_RS29000 () | 16749..17501 | + | 753 | WP_007682029.1 | glucose 1-dehydrogenase | - |
| K426_RS30960 () | 17825..18067 | + | 243 | WP_145907861.1 | hypothetical protein | - |
| K426_RS29005 () | 17950..18522 | + | 573 | WP_007682510.1 | SDR family oxidoreductase | - |
| K426_RS29010 () | 18583..19053 | + | 471 | WP_013040172.1 | nuclear transport factor 2 family protein | - |
| K426_RS29015 () | 19635..20639 | + | 1005 | WP_021319354.1 | FAD-binding protein | - |
| K426_RS29020 () | 20658..21422 | - | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| K426_RS31695 () | 21486..21848 | + | 363 | Protein_24 | TonB-dependent receptor | - |
| K426_RS29030 () | 21888..22640 | + | 753 | WP_015460611.1 | 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase | VF |
| K426_RS29035 () | 22662..23348 | + | 687 | WP_007682394.1 | EthD domain-containing protein | - |
| K426_RS29040 () | 23348..23710 | + | 363 | WP_007682395.1 | hypothetical protein | - |
| K426_RS29045 () | 23808..24572 | - | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| K426_RS29050 () | 24634..25691 | + | 1058 | Protein_29 | Solvent efflux pump outer membrane protein SrpC | VF |
| K426_RS29055 () | 25860..26108 | + | 249 | WP_007682496.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| K426_RS29060 () | 26105..26494 | + | 390 | WP_007682494.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| K426_RS29065 () | 26494..26799 | + | 306 | WP_007682492.1 | hypothetical protein | - |
| K426_RS29070 () | 26796..27194 | + | 399 | WP_007682491.1 | hypothetical protein | - |
| K426_RS29075 () | 27194..28156 | + | 963 | WP_007682488.1 | tyrosine-type recombinase/integrase | - |
| K426_RS29080 () | 28220..29317 | + | 1098 | WP_007683624.1 | IS630 family transposase ISBj5 | Transposase |
| K426_RS29085 () | 29363..29686 | - | 324 | Protein_36 | transposase | - |
| K426_RS29090 () | 29768..30631 | - | 864 | WP_004211466.1 | IS21 family transposase ISRel5 | Transposase |
| K426_RS29095 () | 30628..31180 | - | 553 | Protein_38 | IS21 family transposase ISBj11 | Transposase |
| K426_RS29100 () | 31177..32373 | - | 1197 | WP_007684572.1 | IS256 family transposase ISRm5 | Transposase |
| K426_RS29105 () | 32494..32697 | + | 204 | Protein_40 | helix-turn-helix transcriptional regulator | - |
| K426_RS29110 () | 32758..33522 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| K426_RS29115 () | 33913..36285 | + | 2373 | WP_066564841.1 | Pesticin receptor | VF |
| K426_RS29120 () | 36456..37220 | - | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| K426_RS29125 () | 37413..38105 | + | 693 | WP_007685994.1 | hypothetical protein | - |
| K426_RS31000 () | 39309..39503 | - | 195 | WP_041386987.1 | helix-turn-helix transcriptional regulator | - |
| K426_RS29140 () | 39539..40276 | - | 738 | WP_013038672.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|